RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 RB1CC1Q8TDY2 1594 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 REREQ9P2R6 1566 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 CHD5Q8TDI0 1954 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 PRR14LQ5THK1 2151 aa1.92□□□□□ -2.1
USP53-204ENST00000507906 PRDM2Q13029 1718 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 SMARCA2P51531 1590 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 ABCC12Q96J65 1359 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 IGHV3-73A0A0B4J1V6 119 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 OR11H12B2RN74 326 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 E7EQL1 145 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 LST1O00453 97 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 SLC17A3O00476 420 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 DCTN3O75935 186 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 TNNC2P02585 160 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 ATP6V0CP27449 155 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 HAAOP46952 286 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 TNFRSF9Q07011 255 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 FAM201AQ5SY85 155 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 HCP5Q6MZN7 132 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 PP632Q6XCG6 107 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 HIST2H3AQ71DI3 136 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 CALHM3Q86XJ0 350 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 OR2D3Q8NGH3 330 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 OR11H2Q8NH07 326 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 JOSD2Q8TAC2 188 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 C16orf78Q8WTQ4 265 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 SLC35B4Q969S0 331 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 GNPNAT1Q96EK6 184 aaPredicted RBP1.91□□□□□ -2.1
USP53-204ENST00000507906 MGLLQ99685 303 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 TTTY13Q9BZ97 58 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 OR51V1Q9H2C8 321 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 CMTM6Q9NX76 183 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 MCTS1Q9ULC4 181 aaKnown RBP1.91□□□□□ -2.1
USP53-204ENST00000507906 KLK5Q9Y337 293 aaPredicted RBP1.91□□□□□ -2.1
USP53-204ENST00000507906 LCTP09848 1927 aa1.91□□□□□ -2.1
USP53-204ENST00000507906 DHRS12A0PJE2 317 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 OR5K4A6NMS3 321 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 G3V3Q6 166 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 GOLGA6L19H0YKK7 550 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 TP53I11O14683 189 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 CHP2O43745 196 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 CTXN2P0C2S0 81 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 LPAR6P43657 344 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 MARCKSL1P49006 195 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 AESQ08117 197 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 FADDQ13158 208 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 UAP1Q16222 522 aaPredicted RBP1.9□□□□□ -2.11
USP53-204ENST00000507906 PLPPR5Q32ZL2 321 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 AMTNQ6UX39 209 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 C1orf158Q8N1D5 194 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 CNEP1R1Q8N9A8 125 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 LHFPL5Q8TAF8 219 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 SLC35G5Q96KT7 338 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 NKX6-2Q9C056 277 aaPredicted RBP1.9□□□□□ -2.11
USP53-204ENST00000507906 OR51I2Q9H344 312 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 EEA1Q15075 1411 aa1.9□□□□□ -2.11
USP53-204ENST00000507906 OR4C45A6NMZ5 311 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 A8MUN3 132 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 TMEM114B3SHH9 223 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 C9JCJ5 164 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 ZNF73O43830 326 aaPredicted RBP1.89□□□□□ -2.11
USP53-204ENST00000507906 CPMP14384 443 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 HOXA6P31267 233 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 ZNF140P52738 457 aaPredicted RBP1.89□□□□□ -2.11
USP53-204ENST00000507906 RWDD2BP57060 319 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 SPCS3P61009 180 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 ERVS71-1P61550 626 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 ZNF322Q6U7Q0 402 aaPredicted RBP1.89□□□□□ -2.11
USP53-204ENST00000507906 TRAPPC5Q8IUR0 188 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 GPR119Q8TDV5 335 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 ANKRD7Q92527 254 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 PRAP1Q96NZ9 151 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 PECRQ9BY49 303 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 AICDAQ9GZX7 198 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 PKIGQ9Y2B9 76 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 MMACHCQ9Y4U1 282 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 DSCAML1Q8TD84 2053 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 HECW2Q9P2P5 1572 aa1.89□□□□□ -2.11
USP53-204ENST00000507906 GRIN2BQ13224 1484 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 NAV1Q8NEY1 1877 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 WDR97A6NE52 1622 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 ABCA5Q8WWZ7 1642 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 DHX57Q6P158 1386 aaKnown RBP1.88□□□□□ -2.11
USP53-204ENST00000507906 A0A087WUU8 490 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 IGHV3-15A0A0B4J1V0 119 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 A0A0J9YX75 114 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 SMIM23A6NLE4 172 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 CLDN24A6NM45 220 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 C17orf51A8MQB3 221 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 ODF3BA8MYP8 253 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 DISC1C4P0D8 188 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 EEF1E1-BLOC1S5C9J1V9 151 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 KPNA3O00505 521 aaPredicted RBP1.88□□□□□ -2.11
USP53-204ENST00000507906 IGHV1-69P01742 117 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 FGF6P10767 208 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 UCHL3P15374 230 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 CEBPGP53567 150 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 TBPL1P62380 186 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 BTN3A2P78410 334 aa1.88□□□□□ -2.11
USP53-204ENST00000507906 RUNX1Q01196 453 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms