RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 TIMM23O14925 209 aa14.1□□□□□ -0.15
RNF4-209ENST00000507784 ATG12O94817 140 aa14.1□□□□□ -0.15
RNF4-209ENST00000507784 IGKV1-39P01597 117 aa14.1□□□□□ -0.15
RNF4-209ENST00000507784 IGKV1D-39P04432 117 aa14.1□□□□□ -0.15
RNF4-209ENST00000507784 AKR1C2P52895 323 aa14.1□□□□□ -0.15
RNF4-209ENST00000507784 GGNBP1Q5YKI7 109 aa14.1□□□□□ -0.15
RNF4-209ENST00000507784 GSG1LQ6UXU4 331 aa14.1□□□□□ -0.15
RNF4-209ENST00000507784 OR5AN1Q8NGI8 311 aa14.1□□□□□ -0.15
RNF4-209ENST00000507784 NANPQ8TBE9 248 aa14.1□□□□□ -0.15
RNF4-209ENST00000507784 IL22RA2Q969J5 263 aa14.1□□□□□ -0.15
RNF4-209ENST00000507784 PDCD10Q9BUL8 212 aa14.1□□□□□ -0.15
RNF4-209ENST00000507784 RAB18Q9NP72 206 aa14.1□□□□□ -0.15
RNF4-209ENST00000507784 FAM96BQ9Y3D0 163 aa14.1□□□□□ -0.15
RNF4-209ENST00000507784 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.1□□□□□ -0.157e-7■■■■□ 20.6
RNF4-209ENST00000507784 PIGBOS1A0A0B4J2F0 54 aa14.09□□□□□ -0.15
RNF4-209ENST00000507784 A0A1W2PPI3 338 aa14.09□□□□□ -0.15
RNF4-209ENST00000507784 DBX1A6NMT0 343 aa14.09□□□□□ -0.15
RNF4-209ENST00000507784 RBFOX2O43251 390 aaKnown RBP eCLIP14.09□□□□□ -0.15
RNF4-209ENST00000507784 CD5LO43866 347 aa14.09□□□□□ -0.15
RNF4-209ENST00000507784 PFDN1O60925 122 aa14.09□□□□□ -0.15
RNF4-209ENST00000507784 KRASP01116 189 aa14.09□□□□□ -0.15
RNF4-209ENST00000507784 CXCL3P19876 107 aa14.09□□□□□ -0.15
RNF4-209ENST00000507784 G6PCP35575 357 aa14.09□□□□□ -0.15
RNF4-209ENST00000507784 ARHGDIBP52566 201 aa14.09□□□□□ -0.15
RNF4-209ENST00000507784 RPS16P62249 146 aaKnown RBP14.09□□□□□ -0.15
RNF4-209ENST00000507784 CD83Q01151 205 aa14.09□□□□□ -0.15
RNF4-209ENST00000507784 PDPNQ86YL7 162 aa14.09□□□□□ -0.15
RNF4-209ENST00000507784 DMBX1Q8NFW5 382 aa14.09□□□□□ -0.15
RNF4-209ENST00000507784 CHAC2Q8WUX2 184 aa14.09□□□□□ -0.15
RNF4-209ENST00000507784 FLYWCH2Q96CP2 140 aaKnown RBP14.09□□□□□ -0.15
RNF4-209ENST00000507784 R3HDM4Q96D70 268 aa14.09□□□□□ -0.15
RNF4-209ENST00000507784 RRNAD1Q96FB5 475 aaKnown RBP14.09□□□□□ -0.15
RNF4-209ENST00000507784 MS4A7Q9GZW8 240 aaPredicted RBP14.09□□□□□ -0.15
RNF4-209ENST00000507784 PLEKHA2Q9HB19 425 aa14.09□□□□□ -0.15
RNF4-209ENST00000507784 A0A0U1RQK1 487 aa14.08□□□□□ -0.16
RNF4-209ENST00000507784 DUXBA0A1W2PPF3 345 aa14.08□□□□□ -0.16
RNF4-209ENST00000507784 SHOXO15266 292 aa14.08□□□□□ -0.16
RNF4-209ENST00000507784 CCNKO75909 580 aa14.08□□□□□ -0.16
RNF4-209ENST00000507784 TRAPPC2P0DI81 140 aa14.08□□□□□ -0.16
RNF4-209ENST00000507784 TRAPPC2BP0DI82 140 aa14.08□□□□□ -0.16
RNF4-209ENST00000507784 RAB13P51153 203 aa14.08□□□□□ -0.16
RNF4-209ENST00000507784 ERVK-16P61578 105 aa14.08□□□□□ -0.16
RNF4-209ENST00000507784 DHRS7BQ6IAN0 325 aaPredicted RBP14.08□□□□□ -0.16
RNF4-209ENST00000507784 SSX9Q7RTT3 188 aa14.08□□□□□ -0.16
RNF4-209ENST00000507784 AKAP14Q86UN6 197 aa14.08□□□□□ -0.16
RNF4-209ENST00000507784 SEC22AQ96IW7 307 aa14.08□□□□□ -0.16
RNF4-209ENST00000507784 NUP50Q9UKX7 468 aa14.08□□□□□ -0.16
RNF4-209ENST00000507784 TMED3Q9Y3Q3 217 aa14.08□□□□□ -0.16
RNF4-209ENST00000507784 SOX21Q9Y651 276 aaPredicted RBP14.08□□□□□ -0.16
RNF4-209ENST00000507784 CSMD2Q7Z408 3487 aa14.08□□□□□ -0.16
RNF4-209ENST00000507784 HRASP01112 189 aa14.07□□□□□ -0.16
RNF4-209ENST00000507784 NQO2P16083 231 aa14.07□□□□□ -0.16
RNF4-209ENST00000507784 HES1Q14469 280 aa14.07□□□□□ -0.16
RNF4-209ENST00000507784 OR5M8Q8NGP6 311 aa14.07□□□□□ -0.16
RNF4-209ENST00000507784 GPR146Q96CH1 333 aa14.07□□□□□ -0.16
RNF4-209ENST00000507784 AJUBAQ96IF1 538 aa14.07□□□□□ -0.16
RNF4-209ENST00000507784 ZNF436Q9C0F3 470 aaPredicted RBP14.07□□□□□ -0.16
RNF4-209ENST00000507784 COMMD9Q9P000 198 aa14.07□□□□□ -0.16
RNF4-209ENST00000507784 GSKIPQ9P0R6 139 aa14.07□□□□□ -0.16
RNF4-209ENST00000507784 ASH1LQ9NR48 2969 aaKnown RBP14.06□□□□□ -0.16
RNF4-209ENST00000507784 MPTX1A8MV57 137 aa14.06□□□□□ -0.16
RNF4-209ENST00000507784 IGKV1-5P01602 117 aa14.06□□□□□ -0.16
RNF4-209ENST00000507784 IGKV1-16P04430 117 aa14.06□□□□□ -0.16
RNF4-209ENST00000507784 VDAC1P21796 283 aa14.06□□□□□ -0.16
RNF4-209ENST00000507784 CD24P25063 80 aa14.06□□□□□ -0.16
RNF4-209ENST00000507784 CD1BP29016 333 aa14.06□□□□□ -0.16
RNF4-209ENST00000507784 BRS3P32247 399 aa14.06□□□□□ -0.16
RNF4-209ENST00000507784 HNF4GQ14541 408 aa14.06□□□□□ -0.16
RNF4-209ENST00000507784 IAH1Q2TAA2 248 aaPredicted RBP14.06□□□□□ -0.16
RNF4-209ENST00000507784 TMEM177Q53S58 311 aa14.06□□□□□ -0.16
RNF4-209ENST00000507784 THOC7Q6I9Y2 204 aaKnown RBP14.06□□□□□ -0.16
RNF4-209ENST00000507784 H2BFWTQ7Z2G1 175 aa14.06□□□□□ -0.16
RNF4-209ENST00000507784 VKORC1L1Q8N0U8 176 aa14.06□□□□□ -0.16
RNF4-209ENST00000507784 OR4C13Q8NGP0 309 aa14.06□□□□□ -0.16
RNF4-209ENST00000507784 OSR1Q8TAX0 266 aaPredicted RBP14.06□□□□□ -0.16
RNF4-209ENST00000507784 CFHR4Q92496 578 aa14.06□□□□□ -0.16
RNF4-209ENST00000507784 OR10C1Q96KK4 312 aa14.06□□□□□ -0.16
RNF4-209ENST00000507784 HARBI1Q96MB7 349 aa14.06□□□□□ -0.16
RNF4-209ENST00000507784 MAP1AP78559 2803 aaPredicted RBP14.05□□□□□ -0.16
RNF4-209ENST00000507784 IGKV1D-33P01593 117 aa14.05□□□□□ -0.16
RNF4-209ENST00000507784 IGKV1-33P01594 117 aa14.05□□□□□ -0.16
RNF4-209ENST00000507784 SNRNP70P08621 437 aaKnown RBP14.05□□□□□ -0.16
RNF4-209ENST00000507784 HLA-GP17693 338 aa14.05□□□□□ -0.16
RNF4-209ENST00000507784 BPIFB3P59826 476 aa14.05□□□□□ -0.16
RNF4-209ENST00000507784 KRTAP1-1Q07627 177 aa14.05□□□□□ -0.16
RNF4-209ENST00000507784 IZUMO4Q1ZYL8 232 aa14.05□□□□□ -0.16
RNF4-209ENST00000507784 FAM120AOSQ5T036 256 aa14.05□□□□□ -0.16
RNF4-209ENST00000507784 IL17RELQ6ZVW7 336 aa14.05□□□□□ -0.16
RNF4-209ENST00000507784 TEX29Q8N6K0 151 aa14.05□□□□□ -0.16
RNF4-209ENST00000507784 LSM10Q969L4 123 aaKnown RBP14.05□□□□□ -0.16
RNF4-209ENST00000507784 C2orf50Q96LR7 162 aa14.05□□□□□ -0.16
RNF4-209ENST00000507784 SPIN2AQ99865 258 aa14.05□□□□□ -0.16
RNF4-209ENST00000507784 SPIN2BQ9BPZ2 258 aa14.05□□□□□ -0.16
RNF4-209ENST00000507784 AIFM2Q9BRQ8 373 aa14.05□□□□□ -0.16
RNF4-209ENST00000507784 RANBP3Q9H6Z4 567 aaPredicted RBP14.05□□□□□ -0.16
RNF4-209ENST00000507784 RANGRFQ9HD47 186 aaPredicted RBP14.05□□□□□ -0.16
RNF4-209ENST00000507784 MMP24Q9Y5R2 645 aa14.05□□□□□ -0.16
RNF4-209ENST00000507784 CCDC168Q8NDH2 2452 aa14.05□□□□□ -0.16
RNF4-209ENST00000507784 A0A0G2JRQ6 117 aa14.04□□□□□ -0.16
RNF4-209ENST00000507784 MARCH11A6NNE9 402 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms