RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 DKKL1Q9UK85 242 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 POLR1DQ9Y2S0 133 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 POLR3HQ9Y535 204 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 ADAMTS7Q9UKP4 1686 aa1.57□□□□□ -2.16
HMGB1P28-201ENST00000507778 ATAD5Q96QE3 1844 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 IGLV3-9A0A075B6K5 115 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 TMED7-TICAM2A0A0A6YYA0 188 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 ARRDC5A6NEK1 342 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 NPYP01303 97 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 HLA-DRAP01903 254 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 LGALS9BQ3B8N2 356 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 HSP90B2PQ58FF3 399 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 PABPC1L2AQ5JQF8 200 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 SLC35E3Q7Z769 313 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 SLC51BQ86UW2 128 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 HAVCR2Q8TDQ0 301 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 SMCR5Q8TEV8 140 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 MAP1LC3AQ9H492 121 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 PRO2289Q9P1D8 64 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 COL4A2P08572 1712 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 RTEL1-TNFRSF6BF6WH68 1400 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 LCTP09848 1927 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 PXDNLA1KZ92 1463 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 GRIN2BQ13224 1484 aa1.56□□□□□ -2.16
HMGB1P28-201ENST00000507778 CACNA1SQ13698 1873 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 MYO16Q9Y6X6 1858 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 A0A087WUU8 490 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 TRGV5A0A0B4J1U4 118 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 J3QQQ9 107 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 M0QZ92 97 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 TXNDC9O14530 226 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 DEXIO95424 95 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 IL3P08700 152 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 PEBP1P30086 187 aaKnown RBP1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 MAGEA2P43356 314 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 RPL26P61254 145 aaKnown RBP1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 PRDX4Q13162 271 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 KRTAP13-4Q3LI77 160 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 SAPCD1Q5SSQ6 148 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 FAM78BQ5VT40 261 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 GPHB5Q86YW7 130 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 PACRGLQ8N7B6 248 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 TMEM161BQ8NDZ6 487 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 OR13C8Q8NGS7 320 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 OR5J2Q8NH18 312 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 LHFPL5Q8TAF8 219 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 RAB2BQ8WUD1 216 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 FGFR1OP2Q9NVK5 253 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 TAAR3PQ9P1P4 343 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 RPL26L1Q9UNX3 145 aaKnown RBP1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 ABCC11Q96J66 1382 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 CACNA1GO43497 2377 aa1.55□□□□□ -2.16
HMGB1P28-201ENST00000507778 MYO9BQ13459 2157 aa1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 C9JCJ5 164 aa1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 CXCR6O00574 342 aa1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 BHLHE40O14503 412 aa1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 SLC16A4O15374 487 aa1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 APOMO95445 188 aa1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 BPGMP07738 259 aa1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 RPL12P30050 165 aaKnown RBP1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 RAP1GDS1P52306 607 aa1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 FKBP1AP62942 108 aaKnown RBP1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 ERHP84090 104 aaKnown RBP1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 OGFRL1Q5TC84 451 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 SBSNQ6UWP8 590 aa1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 LRRN1Q6UXK5 716 aa1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 COMMD7Q86VX2 200 aa1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 PIGXQ8TBF5 258 aa1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 CCL13Q99616 98 aa1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 HHLA3Q9XRX5 114 aa1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 KIF15Q9NS87 1388 aa1.54□□□□□ -2.16
HMGB1P28-201ENST00000507778 TRAV41A0A0B4J266 112 aa1.53□□□□□ -2.16
HMGB1P28-201ENST00000507778 LRRN3E7EW58 273 aa1.53□□□□□ -2.16
HMGB1P28-201ENST00000507778 H0Y980 276 aa1.53□□□□□ -2.16
HMGB1P28-201ENST00000507778 REG1AP05451 166 aa1.53□□□□□ -2.16
HMGB1P28-201ENST00000507778 COL5A3P25940 1745 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P28-201ENST00000507778 SLCO1A2P46721 670 aa1.53□□□□□ -2.16
HMGB1P28-201ENST00000507778 TAS2R20P59543 309 aa1.53□□□□□ -2.16
HMGB1P28-201ENST00000507778 TPRXLQ17RH7 258 aa1.53□□□□□ -2.16
HMGB1P28-201ENST00000507778 C5orf46Q6UWT4 87 aa1.53□□□□□ -2.16
HMGB1P28-201ENST00000507778 Q6ZTI0 123 aa1.53□□□□□ -2.16
HMGB1P28-201ENST00000507778 RASSF6Q6ZTQ3 369 aa1.53□□□□□ -2.16
HMGB1P28-201ENST00000507778 OR2T27Q8NH04 317 aa1.53□□□□□ -2.16
HMGB1P28-201ENST00000507778 DDI1Q8WTU0 396 aa1.53□□□□□ -2.16
HMGB1P28-201ENST00000507778 GNPNAT1Q96EK6 184 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P28-201ENST00000507778 TTTY13Q9BZ97 58 aa1.53□□□□□ -2.16
HMGB1P28-201ENST00000507778 HRASLSQ9HDD0 168 aa1.53□□□□□ -2.16
HMGB1P28-201ENST00000507778 FKBP14Q9NWM8 211 aa1.53□□□□□ -2.16
HMGB1P28-201ENST00000507778 KDM5BQ9UGL1 1544 aa1.53□□□□□ -2.16
HMGB1P28-201ENST00000507778 ZNF860A6NHJ4 632 aa1.52□□□□□ -2.17
HMGB1P28-201ENST00000507778 COX7A2LO14548 114 aa1.52□□□□□ -2.17
HMGB1P28-201ENST00000507778 MYL12AP19105 171 aa1.52□□□□□ -2.17
HMGB1P28-201ENST00000507778 FXYD7P58549 80 aa1.52□□□□□ -2.17
HMGB1P28-201ENST00000507778 AP1S1P61966 158 aa1.52□□□□□ -2.17
HMGB1P28-201ENST00000507778 RSU1Q15404 277 aa1.52□□□□□ -2.17
HMGB1P28-201ENST00000507778 LRRC75BQ2VPJ9 315 aa1.52□□□□□ -2.17
HMGB1P28-201ENST00000507778 HIST2H3AQ71DI3 136 aa1.52□□□□□ -2.17
HMGB1P28-201ENST00000507778 ZNF675Q8TD23 568 aa1.52□□□□□ -2.17
HMGB1P28-201ENST00000507778 TMA16Q96EY4 203 aaKnown RBP1.52□□□□□ -2.17
HMGB1P28-201ENST00000507778 TIMM21Q9BVV7 248 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms