RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 BLVRAP53004 296 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 SLC36A2Q495M3 483 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 C1orf194Q5T5A4 169 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 CST9Q5W186 159 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 OR4X2Q8NGF9 303 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 OR4X1Q8NH49 305 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 ANKRD36BP1Q96IX9 119 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 NMNAT3Q96T66 252 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 MIEN1Q9BRT3 115 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 TTTY13Q9BZ97 58 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 BABAM2Q9NXR7 383 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 DSCAMO60469 2012 aa1.23□□□□□ -2.21
LSM6-205ENST00000507449 KIF15Q9NS87 1388 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 ATG2BQ96BY7 2078 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 CXCR6O00574 342 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 APOMO95445 188 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 IL3P08700 152 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 CCL1P22362 96 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 GABRA2P47869 451 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 CDC34P49427 236 aaPredicted RBP1.22□□□□□ -2.21
LSM6-205ENST00000507449 TBPL1P62380 186 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 TPM4P67936 248 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 BTN3A2P78410 334 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 HOXC5Q00444 222 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 PLPPR5Q32ZL2 321 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 N4BP2L1Q5TBK1 243 aaPredicted RBP1.22□□□□□ -2.21
LSM6-205ENST00000507449 SBSNQ6UWP8 590 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 DCANP1Q8TF63 244 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 ZNF625Q96I27 306 aaPredicted RBP1.22□□□□□ -2.21
LSM6-205ENST00000507449 TIMM21Q9BVV7 248 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 KRTAP4-1Q9BYQ7 146 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 NDUFB11Q9NX14 153 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 DKKL1Q9UK85 242 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 COQ4Q9Y3A0 265 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 PLXNA3P51805 1871 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 RTEL1-TNFRSF6BF6WH68 1400 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 ITGB4P16144 1822 aa1.22□□□□□ -2.21
LSM6-205ENST00000507449 STRCP1A6NGW2 1772 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 CHD5Q8TDI0 1954 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 IGLV3-9A0A075B6K5 115 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 ARRDC5A6NEK1 342 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 PFDN6O15212 129 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 PRB1P04280 392 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 BPGMP07738 259 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 RPL12P30050 165 aaKnown RBP1.21□□□□□ -2.22
LSM6-205ENST00000507449 RPL27AP46776 148 aaKnown RBP1.21□□□□□ -2.22
LSM6-205ENST00000507449 REG1BP48304 166 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 FKBP1AP62942 108 aaKnown RBP1.21□□□□□ -2.22
LSM6-205ENST00000507449 COTL1Q14019 142 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 ZNF791Q3KP31 576 aaPredicted RBP1.21□□□□□ -2.22
LSM6-205ENST00000507449 TNFAIP8L2Q6P589 184 aaPredicted RBP1.21□□□□□ -2.22
LSM6-205ENST00000507449 Q6ZRN7 208 aaPredicted RBP1.21□□□□□ -2.22
LSM6-205ENST00000507449 COMMD7Q86VX2 200 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 UBL4BQ8N7F7 174 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 OR2T27Q8NH04 317 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 SGMS2Q8NHU3 365 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 DDI1Q8WTU0 396 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 RAB2BQ8WUD1 216 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 GNPNAT1Q96EK6 184 aaPredicted RBP1.21□□□□□ -2.22
LSM6-205ENST00000507449 MRPS24Q96EL2 167 aaKnown RBP1.21□□□□□ -2.22
LSM6-205ENST00000507449 CCL13Q99616 98 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 HRASLSQ9HDD0 168 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 POLR1DQ9Y2S0 133 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 RBM7Q9Y580 266 aaKnown RBP1.21□□□□□ -2.22
LSM6-205ENST00000507449 REREQ9P2R6 1566 aa1.21□□□□□ -2.22
LSM6-205ENST00000507449 SORL1Q92673 2214 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 TMSB15BA0A087X1C1 80 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 TRGV5A0A0B4J1U4 118 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 A0A1B0GVG6 124 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 ZNF860A6NHJ4 632 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 EVPLLA8MZ36 301 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 C2orf74A8MZ97 194 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 C21orf140B9A014 251 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 H0Y980 276 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 M0QZ92 97 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 BHLHE40O14503 412 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 SSNA1O43805 119 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 DEXIO95424 95 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 NPYP01303 97 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 DDTP30046 118 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 MAGEA2P43356 314 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 HINT1P49773 126 aaPredicted RBP1.2□□□□□ -2.22
LSM6-205ENST00000507449 ZNF90Q03938 601 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 UAP1Q16222 522 aaPredicted RBP1.2□□□□□ -2.22
LSM6-205ENST00000507449 CDKL4Q5MAI5 379 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 Q6ZS52 159 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 Q6ZTI0 123 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 RASSF6Q6ZTQ3 369 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 LHFPL1Q86WI0 220 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 UMODL1-AS1Q8N2C9 162 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 ZNF675Q8TD23 568 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 C12orf43Q96C57 262 aaKnown RBP1.2□□□□□ -2.22
LSM6-205ENST00000507449 DRC3Q9H069 523 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 TMEM222Q9H0R3 208 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 ANAPC10Q9UM13 185 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 ARHGAP32A7KAX9 2087 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 ABCC11Q96J66 1382 aa1.2□□□□□ -2.22
LSM6-205ENST00000507449 RFPL4AA6NLU0 287 aa1.19□□□□□ -2.22
LSM6-205ENST00000507449 ZNF705FA8MVS1 300 aaPredicted RBP1.19□□□□□ -2.22
LSM6-205ENST00000507449 RFPL4AL1F8VTS6 287 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms