RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ZNF383Q8NA42 475 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 OR2G2Q8NGZ5 317 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 GIPC3Q8TF64 312 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 SRSF12Q8WXF0 261 aaKnown RBP5.13□□□□□ -1.59
VCAN-207ENST00000507162 TLCD1Q96CP7 247 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 NSL1Q96IY1 281 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 S100A13Q99584 98 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 CLEC5AQ9NY25 188 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 X6R8D5 127 aa5.13□□□□□ -1.59
VCAN-207ENST00000507162 ZNF207O43670 478 aaKnown RBP5.12□□□□□ -1.59
VCAN-207ENST00000507162 SULT1C4O75897 302 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 BAG2O95816 211 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 IFNA5P01569 189 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 PRB4P10163 310 aaPredicted RBP5.12□□□□□ -1.59
VCAN-207ENST00000507162 COX4I1P13073 169 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 ATP6V1B2P21281 511 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 EMP1P54849 157 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 FAM3BP58499 235 aaPredicted RBP5.12□□□□□ -1.59
VCAN-207ENST00000507162 RPS27AP62979 156 aaKnown RBP5.12□□□□□ -1.59
VCAN-207ENST00000507162 MPV17LQ2QL34 196 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 LY6G6FQ5SQ64 297 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 LIPKQ5VXJ0 399 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 GLT8D1Q68CQ7 371 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 LEMD1Q68G75 181 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 RAB12Q6IQ22 244 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 PDPNQ86YL7 162 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 TTC9CQ8N5M4 171 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 OR10H4Q8NGA5 316 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 TMEM163Q8TC26 289 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 EEF1AKMT3Q96AZ1 226 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 FAM210BQ96KR6 192 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 HARBI1Q96MB7 349 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 ARPC5LQ9BPX5 153 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 C20orf24Q9BUV8 137 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 TMBIM4Q9HC24 238 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 SLC35D1Q9NTN3 355 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 ZNF221Q9UK13 617 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 TBC1D24Q9ULP9 559 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 PEX16Q9Y5Y5 336 aa5.12□□□□□ -1.59
VCAN-207ENST00000507162 IGHV3OR16-8A0A075B7F1 116 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 DPPA5A6NC42 116 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 HMX3A6NHT5 357 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 SRRM4A7MD48 611 aaKnown RBP5.11□□□□□ -1.59
VCAN-207ENST00000507162 M0R129 80 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 PRKYO43930 277 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 GPX5O75715 221 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 ACTL6BO94805 426 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 ISG15P05161 165 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 OSMP13725 252 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 RAB3AP20336 220 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 ATP6V1E1P36543 226 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 KRTAP10-1P60331 282 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 ICAM4Q14773 271 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 SLC22A6Q4U2R8 563 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 NHLRC3Q5JS37 347 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 OR2T5Q6IEZ7 315 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 PLET1Q6UQ28 207 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 IDO2Q6ZQW0 420 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 SSX9Q7RTT3 188 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 FAM220AQ7Z4H9 259 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 SLC25A42Q86VD7 318 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 STHQ8IWL8 128 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 OR2T29Q8NH02 315 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 GIMAP1Q8WWP7 306 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 CPNE2Q96FN4 548 aaPredicted RBP5.11□□□□□ -1.59
VCAN-207ENST00000507162 CYYR1Q96J86 154 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 SPIN2AQ99865 258 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 SPIN2BQ9BPZ2 258 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 SRSF8Q9BRL6 282 aaKnown RBP5.11□□□□□ -1.59
VCAN-207ENST00000507162 SIKE1Q9BRV8 207 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 ZNF556Q9HAH1 456 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 SPACA1Q9HBV2 294 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 ARL8BQ9NVJ2 186 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 ABRACLQ9P1F3 81 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 ABCD2Q9UBJ2 740 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 LRRC42Q9Y546 428 aa5.11□□□□□ -1.59
VCAN-207ENST00000507162 V9GYY5 206 aaPredicted RBP5.11□□□□□ -1.59
VCAN-207ENST00000507162 LRP1Q07954 4544 aaKnown RBP5.11□□□□□ -1.59
VCAN-207ENST00000507162 A0A1W2PP11 408 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 ZNF705EA8MWA4 302 aaPredicted RBP5.1□□□□□ -1.59
VCAN-207ENST00000507162 M0R1X1 148 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 EDF1O60869 148 aaKnown RBP5.1□□□□□ -1.59
VCAN-207ENST00000507162 PROP1O75360 226 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 HTR1AP08908 422 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 GIG44P09565 113 aaPredicted RBP5.1□□□□□ -1.59
VCAN-207ENST00000507162 OR2T7P0C7T2 308 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 SPART-AS1P0CW21 52 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 GTF2F2P13984 249 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 BTF3P20290 206 aaKnown RBP5.1□□□□□ -1.59
VCAN-207ENST00000507162 FUT3P21217 361 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 GPR183P32249 361 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 CEACAM6P40199 344 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 DEFB131AP59861 70 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 NANOS3P60323 173 aaKnown RBP5.1□□□□□ -1.59
VCAN-207ENST00000507162 GK3PQ14409 553 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 PRSS8Q16651 343 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 VMA21Q3ZAQ7 101 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 FAM98BQ52LJ0 330 aaKnown RBP5.1□□□□□ -1.59
VCAN-207ENST00000507162 ZNF529Q6P280 563 aa5.1□□□□□ -1.59
VCAN-207ENST00000507162 WDR93Q6P2C0 686 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms