RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 FAM71E2Q8N5Q1 922 aa10.22□□□□□ -0.77
TCOF1-210ENST00000506767 C5orf56Q8N8D9 126 aa10.22□□□□□ -0.77
TCOF1-210ENST00000506767 Q8N9W7 124 aa10.22□□□□□ -0.77
TCOF1-210ENST00000506767 OR4C13Q8NGP0 309 aa10.22□□□□□ -0.77
TCOF1-210ENST00000506767 ZFAND1Q8TCF1 268 aa10.22□□□□□ -0.77
TCOF1-210ENST00000506767 MARCH1Q8TCQ1 289 aa10.22□□□□□ -0.77
TCOF1-210ENST00000506767 TCTEX1D2Q8WW35 142 aa10.22□□□□□ -0.77
TCOF1-210ENST00000506767 TAF15Q92804 592 aaKnown RBP eCLIP10.22□□□□□ -0.77
TCOF1-210ENST00000506767 FLYWCH2Q96CP2 140 aaKnown RBP10.22□□□□□ -0.77
TCOF1-210ENST00000506767 C7orf50Q9BRJ6 194 aaKnown RBP10.22□□□□□ -0.77
TCOF1-210ENST00000506767 NPFFR1Q9GZQ6 430 aa10.22□□□□□ -0.77
TCOF1-210ENST00000506767 C16orf95Q9H693 158 aa10.22□□□□□ -0.77
TCOF1-210ENST00000506767 PRELID3BQ9Y3B1 194 aa10.22□□□□□ -0.77
TCOF1-210ENST00000506767 ATRQ13535 2644 aa10.22□□□□□ -0.77
TCOF1-210ENST00000506767 COL6A5A8TX70 2615 aa10.21□□□□□ -0.77
TCOF1-210ENST00000506767 TMEM89A2RUT3 159 aa10.21□□□□□ -0.77
TCOF1-210ENST00000506767 NAP1L6A6NFF2 107 aa10.21□□□□□ -0.77
TCOF1-210ENST00000506767 NBR2O15453 112 aa10.21□□□□□ -0.77
TCOF1-210ENST00000506767 FCGR3BO75015 233 aa10.21□□□□□ -0.77
TCOF1-210ENST00000506767 IGLV2-23P01705 113 aa10.21□□□□□ -0.77
TCOF1-210ENST00000506767 CTSDP07339 412 aaPredicted RBP10.21□□□□□ -0.77
TCOF1-210ENST00000506767 PGAM2P15259 253 aa10.21□□□□□ -0.77
TCOF1-210ENST00000506767 KIR2DS2P43631 304 aa10.21□□□□□ -0.77
TCOF1-210ENST00000506767 LGALS7P47929 136 aa10.21□□□□□ -0.77
TCOF1-210ENST00000506767 CATR1Q13166 79 aa10.21□□□□□ -0.77
TCOF1-210ENST00000506767 PHLDA2Q53GA4 152 aa10.21□□□□□ -0.77
TCOF1-210ENST00000506767 TMEM158Q8WZ71 300 aa10.21□□□□□ -0.77
TCOF1-210ENST00000506767 RTBDNQ9BSG5 229 aaPredicted RBP10.21□□□□□ -0.77
TCOF1-210ENST00000506767 ZNF702PQ9H963 129 aa10.21□□□□□ -0.77
TCOF1-210ENST00000506767 SLC2A9Q9NRM0 540 aa10.21□□□□□ -0.77
TCOF1-210ENST00000506767 NCBP2LA6PVI3 153 aaKnown RBP10.2□□□□□ -0.78
TCOF1-210ENST00000506767 SRRM4A7MD48 611 aaKnown RBP10.2□□□□□ -0.78
TCOF1-210ENST00000506767 RBFOX2O43251 390 aaKnown RBP eCLIP10.2□□□□□ -0.78
TCOF1-210ENST00000506767 CRYZL1O95825 349 aa10.2□□□□□ -0.78
TCOF1-210ENST00000506767 RLN1P04808 185 aa10.2□□□□□ -0.78
TCOF1-210ENST00000506767 PI3P19957 117 aa10.2□□□□□ -0.78
TCOF1-210ENST00000506767 F2RP25116 425 aa10.2□□□□□ -0.78
TCOF1-210ENST00000506767 BTCP35070 178 aa10.2□□□□□ -0.78
TCOF1-210ENST00000506767 PIGPP57054 158 aa10.2□□□□□ -0.78
TCOF1-210ENST00000506767 RPS16P62249 146 aaKnown RBP10.2□□□□□ -0.78
TCOF1-210ENST00000506767 PSG5Q15238 335 aa10.2□□□□□ -0.78
TCOF1-210ENST00000506767 MMDQ15546 238 aa10.2□□□□□ -0.78
TCOF1-210ENST00000506767 Q6ZS46 218 aa10.2□□□□□ -0.78
TCOF1-210ENST00000506767 TBC1D26Q86UD7 250 aa10.2□□□□□ -0.78
TCOF1-210ENST00000506767 TCTEX1D1Q8N7M0 179 aa10.2□□□□□ -0.78
TCOF1-210ENST00000506767 OR51H1Q8NH63 302 aa10.2□□□□□ -0.78
TCOF1-210ENST00000506767 OR4S2Q8NH73 311 aa10.2□□□□□ -0.78
TCOF1-210ENST00000506767 OSR1Q8TAX0 266 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-210ENST00000506767 C19orf24Q9BVV8 132 aa10.2□□□□□ -0.78
TCOF1-210ENST00000506767 PRSS22Q9GZN4 317 aa10.2□□□□□ -0.78
TCOF1-210ENST00000506767 C5orf66Q9H5L9 145 aa10.2□□□□□ -0.78
TCOF1-210ENST00000506767 FAM212BQ9NTI7 297 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-210ENST00000506767 LIN7CQ9NUP9 197 aaKnown RBP10.2□□□□□ -0.78
TCOF1-210ENST00000506767 VSIG4Q9Y279 399 aa10.2□□□□□ -0.78
TCOF1-210ENST00000506767 LINC00854A0A1B0GVQ3 168 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 CENPXA8MT69 81 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 RRHO14718 337 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 MPPED1O15442 326 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 RAMP3O60896 148 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 UPK1BO75841 260 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 SPDEFO95238 335 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 CRYGBP07316 175 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 VSIG10L2P0DP72 767 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 S100GP29377 79 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 RAG2P55895 527 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 IFITM3Q01628 133 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 CBX3Q13185 183 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 C5orf64Q2M2E5 130 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 ABCA11PQ4W5N1 156 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 ZNF585BQ52M93 769 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 OR2B11Q5JQS5 317 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 SPAG16Q8N0X2 631 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 CD300LFQ8TDQ1 290 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 HARBI1Q96MB7 349 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 SCGB3A2Q96PL1 93 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 TSNAXQ99598 290 aaKnown RBP10.19□□□□□ -0.78
TCOF1-210ENST00000506767 SLC25A21Q9BQT8 299 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-210ENST00000506767 MMP24Q9Y5R2 645 aa10.19□□□□□ -0.78
TCOF1-210ENST00000506767 SH2D7A6NKC9 451 aaPredicted RBP10.18□□□□□ -0.78
TCOF1-210ENST00000506767 SHOXO15266 292 aa10.18□□□□□ -0.78
TCOF1-210ENST00000506767 LYRM1O43325 122 aa10.18□□□□□ -0.78
TCOF1-210ENST00000506767 PEX14O75381 377 aa10.18□□□□□ -0.78
TCOF1-210ENST00000506767 HPRT1P00492 218 aa10.18□□□□□ -0.78
TCOF1-210ENST00000506767 COMPP49747 757 aaPredicted RBP10.18□□□□□ -0.78
TCOF1-210ENST00000506767 CCR6P51684 374 aa10.18□□□□□ -0.78
TCOF1-210ENST00000506767 FOXL1Q12952 345 aa10.18□□□□□ -0.78
TCOF1-210ENST00000506767 CCDC71LQ8N9Z2 235 aa10.18□□□□□ -0.78
TCOF1-210ENST00000506767 POC5Q8NA72 575 aa10.18□□□□□ -0.78
TCOF1-210ENST00000506767 OR4F5Q8NH21 305 aa10.18□□□□□ -0.78
TCOF1-210ENST00000506767 LINC01006Q8NI28 216 aa10.18□□□□□ -0.78
TCOF1-210ENST00000506767 RASL11BQ9BPW5 248 aa10.18□□□□□ -0.78
TCOF1-210ENST00000506767 FBXL15Q9H469 300 aa10.18□□□□□ -0.78
TCOF1-210ENST00000506767 PLEKHA2Q9HB19 425 aa10.18□□□□□ -0.78
TCOF1-210ENST00000506767 KIAA1456Q9P272 454 aa10.18□□□□□ -0.78
TCOF1-210ENST00000506767 COPZ2Q9P299 210 aa10.18□□□□□ -0.78
TCOF1-210ENST00000506767 TBC1D24Q9ULP9 559 aa10.18□□□□□ -0.78
TCOF1-210ENST00000506767 C14orf166Q9Y224 244 aaKnown RBP10.18□□□□□ -0.78
TCOF1-210ENST00000506767 NDUFB6O95139 128 aa10.17□□□□□ -0.78
TCOF1-210ENST00000506767 IGHG2P01859 326 aa10.17□□□□□ -0.78
TCOF1-210ENST00000506767 HLA-DRB1P01911 266 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms