RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 TMEM177Q53S58 311 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 ACTBL2Q562R1 376 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 PYHIN1Q6K0P9 492 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 UNQ5815/PRO19632Q6UWF5 114 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 LFNGQ8NES3 379 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 ARPC1AQ92747 370 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 SLC25A38Q96DW6 304 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 OR5B12Q96R08 314 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 CLCC1Q96S66 551 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 GINS4Q9BRT9 223 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 DCSTAMPQ9H295 470 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 RNF167Q9H6Y7 350 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 RHBDL2Q9NX52 303 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 RRP15Q9Y3B9 282 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 A3GALT2U3KPV4 340 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 DNAH9Q9NYC9 4486 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 SRRM4A7MD48 611 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 LINC00473A8K010 186 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 SSX5O60225 188 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 LGALS1P09382 135 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 CTXN2P0C2S0 81 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 RRASP10301 218 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 INSL3P51460 131 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 PITPNAQ00169 270 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 PJVKQ0ZLH3 352 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 FXYD3Q14802 87 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 CNIH2Q6PI25 160 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 BVESQ8NE79 360 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 OR5H6Q8NGV6 325 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 ABHD5Q8WTS1 349 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 CASTOR1Q8WTX7 329 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 NUDCD2Q8WVJ2 157 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 ADTRPQ96IZ2 230 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 HARBI1Q96MB7 349 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 B9D2Q9BPU9 175 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 ALX4Q9H161 411 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 SLA2Q9H6Q3 261 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 LSM4Q9Y4Z0 139 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 ETV7Q9Y603 341 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 COL7A1Q02388 2944 aa7.01□□□□□ -1.29
PDLIM5-209ENST00000506632 SORL1Q92673 2214 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 IGHV4OR15-8A0A075B7B6 117 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 A0A087WW49 117 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 LINC01619G3V211 115 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 H3BUA1 57 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 TUSC2O75896 110 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 BRI3O95415 125 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 IGLV2-14P01704 120 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 HLA-DQB1P01920 261 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 CD36P16671 472 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 MXD1Q05195 221 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 EIF4EBP1Q13541 118 aaPredicted RBP7□□□□□ -1.29
PDLIM5-209ENST00000506632 DCTN2Q13561 401 aaKnown RBP7□□□□□ -1.29
PDLIM5-209ENST00000506632 NEDD8Q15843 81 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 RTL8BQ17RB0 113 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 DEFB121Q5J5C9 76 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 ZNF645Q8N7E2 425 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 POC5Q8NA72 575 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 GRPEL2Q8TAA5 225 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 DCUN1D4Q92564 292 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 DLX4Q92988 240 aaPredicted RBP7□□□□□ -1.29
PDLIM5-209ENST00000506632 ST6GALNAC5Q9BVH7 336 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 OR2W1Q9Y3N9 320 aa7□□□□□ -1.29
PDLIM5-209ENST00000506632 RBM7Q9Y580 266 aaKnown RBP7□□□□□ -1.29
PDLIM5-209ENST00000506632 A0A0A6YYH2 397 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 IGKV1D-13A0A0B4J2D9 117 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 LOC100506127A0A0U1RQW1 187 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 ANKRD34BA5PLL1 514 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 A6NJ64 397 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 OVOL1O14753 267 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 SHOXO15266 292 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 EIF4EBP3O60516 100 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 TMEM127O75204 238 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 SLC22A5O76082 557 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 CRYZL1O95825 349 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 SCGB1D2O95969 90 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 IGKV1-13P0DP09 117 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 NFYAP23511 347 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 SLURP1P55000 103 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 TPPP2P59282 170 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 GNG2P59768 71 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 UBE2KP61086 200 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 CBX3Q13185 183 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 PRSS8Q16651 343 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 IDNKQ5T6J7 187 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 C11orf87Q6NUJ2 197 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 OVCH2Q7RTZ1 564 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 TEX45Q8NA69 505 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 OSR1Q8TAX0 266 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 TMEM68Q96MH6 324 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 MS4A10Q96PG2 267 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 PRR25Q96S07 402 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 ANXA10Q9UJ72 324 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 ADAM30Q9UKF2 790 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 SPATA2Q9UM82 520 aa6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 RBMX2Q9Y388 322 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-209ENST00000506632 CNIH1O95406 144 aa6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 IGHV3-11P01762 117 aa6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 TRGV3P03979 118 aa6.98□□□□□ -1.29
PDLIM5-209ENST00000506632 HSPB1P04792 205 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms