RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 KRTAP21-3Q3LHN1 58 aa11.27□□□□□ -0.6
SERF1B-204ENST00000506542 LRRC37A5PQ49AS3 106 aa11.27□□□□□ -0.6
SERF1B-204ENST00000506542 RPL39P5Q59GN2 51 aa11.27□□□□□ -0.6
SERF1B-204ENST00000506542 ODF3L1Q8IXM7 274 aa11.27□□□□□ -0.6
SERF1B-204ENST00000506542 TCTEX1D1Q8N7M0 179 aa11.27□□□□□ -0.6
SERF1B-204ENST00000506542 MDFIC2A0A1B0GVS7 189 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 LINC00473A8K010 186 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 HMSDA8MTL9 139 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 VENTXO95231 258 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 MPC2O95563 127 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 IGKV1-39P01597 117 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 IGKV1D-39P04432 117 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 RPA2P15927 270 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 GATA3P23771 443 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 PSMB6P28072 239 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 DUTP33316 252 aaKnown RBP11.27□□□□□ -0.61
SERF1B-204ENST00000506542 KRTAP24-1Q3LI83 254 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 NMSQ5H8A3 153 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 RUSC1-AS1Q66K80 236 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 C11orf87Q6NUJ2 197 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 BRD3OSQ6XYD6 125 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 LYG1Q8N1E2 194 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 C8orf31Q8N9H6 132 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 ZBTB8BQ8NAP8 495 aaPredicted RBP11.27□□□□□ -0.61
SERF1B-204ENST00000506542 NANPQ8TBE9 248 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 ZNF596Q8TC21 504 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 TCTEX1D2Q8WW35 142 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 GSKIPQ9P0R6 139 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 SESN1Q9Y6P5 492 aa11.27□□□□□ -0.61
SERF1B-204ENST00000506542 FXYD6-FXYD2A0A087WZ82 144 aa11.26□□□□□ -0.61
SERF1B-204ENST00000506542 M0R1X1 148 aa11.26□□□□□ -0.61
SERF1B-204ENST00000506542 LIPFP07098 398 aa11.26□□□□□ -0.61
SERF1B-204ENST00000506542 SLC25A4P12235 298 aa11.26□□□□□ -0.61
SERF1B-204ENST00000506542 BRWD1-AS2P59051 145 aa11.26□□□□□ -0.61
SERF1B-204ENST00000506542 SPAG16Q8N0X2 631 aa11.26□□□□□ -0.61
SERF1B-204ENST00000506542 DUX5Q96PT3 197 aa11.26□□□□□ -0.61
SERF1B-204ENST00000506542 TBX15Q96SF7 602 aa11.26□□□□□ -0.61
SERF1B-204ENST00000506542 ZNF251Q9BRH9 671 aa11.26□□□□□ -0.61
SERF1B-204ENST00000506542 PLSCR3Q9NRY6 295 aa11.26□□□□□ -0.61
SERF1B-204ENST00000506542 BOLA1Q9Y3E2 137 aa11.26□□□□□ -0.61
SERF1B-204ENST00000506542 HSPB11Q9Y547 144 aa11.26□□□□□ -0.61
SERF1B-204ENST00000506542 ENSAO43768 121 aaKnown RBP11.25□□□□□ -0.61
SERF1B-204ENST00000506542 RAMP3O60896 148 aa11.25□□□□□ -0.61
SERF1B-204ENST00000506542 RAB32Q13637 225 aa11.25□□□□□ -0.61
SERF1B-204ENST00000506542 LGALSLQ3ZCW2 172 aaPredicted RBP11.25□□□□□ -0.61
SERF1B-204ENST00000506542 OR2B11Q5JQS5 317 aa11.25□□□□□ -0.61
SERF1B-204ENST00000506542 NCR3LG1Q68D85 454 aa11.25□□□□□ -0.61
SERF1B-204ENST00000506542 LINC00311Q8N616 119 aa11.25□□□□□ -0.61
SERF1B-204ENST00000506542 THAP6Q8TBB0 222 aa11.25□□□□□ -0.61
SERF1B-204ENST00000506542 LSM10Q969L4 123 aaKnown RBP11.25□□□□□ -0.61
SERF1B-204ENST00000506542 ZNF48Q96MX3 618 aaPredicted RBP11.25□□□□□ -0.61
SERF1B-204ENST00000506542 SPIN2AQ99865 258 aa11.25□□□□□ -0.61
SERF1B-204ENST00000506542 SPIN2BQ9BPZ2 258 aa11.25□□□□□ -0.61
SERF1B-204ENST00000506542 TMEM133Q9H2Q1 129 aa11.25□□□□□ -0.61
SERF1B-204ENST00000506542 ESM1Q9NQ30 184 aa11.25□□□□□ -0.61
SERF1B-204ENST00000506542 ONECUT1Q9UBC0 465 aa11.25□□□□□ -0.61
SERF1B-204ENST00000506542 J3QR06 171 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 SNAPC5O75971 98 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 MMP9P14780 707 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 LPAR6P43657 344 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 LINC00205P59089 165 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 TMEM65Q6PI78 240 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 OR9G1Q8NH87 305 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 CD300LFQ8TDQ1 290 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 DDB2Q92466 427 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 TAF15Q92804 592 aaKnown RBP eCLIP11.24□□□□□ -0.61
SERF1B-204ENST00000506542 SIRPDQ9H106 197 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 ZNRD1Q9P1U0 126 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 MBD2Q9UBB5 411 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 hCG_1809904A0A1W2PP81 198 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 A0A1W2PPE2 198 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 A0A1W2PR64 198 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 A0A1W2PRD5 423 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 A0A1W2PRF3 423 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 A0A1W2PRM7 423 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 A0A1W2PRV1 198 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 ARPC5O15511 151 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 RBFOX2O43251 390 aaKnown RBP eCLIP11.24□□□□□ -0.61
SERF1B-204ENST00000506542 TOX4O94842 621 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 IGKV1-5P01602 117 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 PET100P0DJ07 73 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 SLC25A6P12236 298 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 LYL1P12980 280 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 ZNF546Q86UE3 836 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 SIGLECL1Q8N7X8 197 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 OR4D5Q8NGN0 318 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 ADTRPQ96IZ2 230 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 S1PR3Q99500 378 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 SIRT7Q9NRC8 400 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 NUP50Q9UKX7 468 aa11.24□□□□□ -0.61
SERF1B-204ENST00000506542 A0A0G2JRQ6 117 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 H0YIZ8 118 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 M0R1W7 72 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 TCF21O43680 179 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 CXCL2P19875 107 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 KIR2DS2P43631 304 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 THBS3P49746 956 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 AKR1C2P52895 323 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 S100A10P60903 97 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 ZNF816Q0VGE8 651 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms