RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 SLC5A7Q9GZV3 580 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 SAV1Q9H4B6 383 aaPredicted RBP5.85□□□□□ -1.47
NUP54-204ENST00000506098 C5orf66Q9H5L9 145 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 CCL28Q9NRJ3 127 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 SDHAF2Q9NX18 166 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 VSIG4Q9Y279 399 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 TBL2Q9Y4P3 447 aaKnown RBP5.85□□□□□ -1.47
NUP54-204ENST00000506098 AMMECR1Q9Y4X0 333 aaPredicted RBP5.85□□□□□ -1.47
NUP54-204ENST00000506098 MINOS1-NBL1R4GNA1 71 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 SONP18583 2426 aaKnown RBP5.85□□□□□ -1.47
NUP54-204ENST00000506098 ANK3Q12955 4377 aaKnown RBP5.84□□□□□ -1.47
NUP54-204ENST00000506098 MXRA5Q9NR99 2828 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 SAA2-SAA4A0A096LPE2 208 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 A0A1W2PN81 502 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 A0A1W2PPE3 182 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 CYSRT1A8MQ03 144 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 I3L521 148 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 SMAD7O15105 426 aaKnown RBP5.84□□□□□ -1.47
NUP54-204ENST00000506098 ARG1P05089 322 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 SAA2P0DJI9 122 aaPredicted RBP5.84□□□□□ -1.47
NUP54-204ENST00000506098 RRASP10301 218 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 SPNP16150 400 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 CHRNA7P36544 502 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 GPX4P36969 197 aaPredicted RBP5.84□□□□□ -1.47
NUP54-204ENST00000506098 GPR12P47775 334 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 UBE2MP61081 183 aaKnown RBP5.84□□□□□ -1.47
NUP54-204ENST00000506098 ZNF816Q0VGE8 651 aaPredicted RBP5.84□□□□□ -1.47
NUP54-204ENST00000506098 GAGE1Q13065 139 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 MIDNQ504T8 468 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 KLF17Q5JT82 389 aaPredicted RBP5.84□□□□□ -1.47
NUP54-204ENST00000506098 LDLRAD2Q5SZI1 272 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 FAHD2BQ6P2I3 314 aaPredicted RBP5.84□□□□□ -1.47
NUP54-204ENST00000506098 PLET1Q6UQ28 207 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 ZNF66Q6ZN08 573 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 ZNF833PQ6ZTB9 187 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 SLC25A42Q86VD7 318 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 DRAM1Q8N682 238 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 LHX4Q969G2 390 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 TOMM40LQ969M1 308 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 TMEM230Q96A57 120 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 FAHD2AQ96GK7 314 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 C5orf30Q96GV9 206 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 AJUBAQ96IF1 538 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 ST6GAL2Q96JF0 529 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 C20orf85Q9H1P6 137 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 OR2D2Q9H210 308 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 FAM212BQ9NTI7 297 aaPredicted RBP5.84□□□□□ -1.47
NUP54-204ENST00000506098 TMEM160Q9NX00 188 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 ZNRD1Q9P1U0 126 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 RNF150Q9ULK6 438 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 FLVCR2Q9UPI3 526 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 C14orf166Q9Y224 244 aaKnown RBP5.84□□□□□ -1.47
NUP54-204ENST00000506098 RBM7Q9Y580 266 aaKnown RBP5.84□□□□□ -1.47
NUP54-204ENST00000506098 HIVEP1P15822 2718 aa5.84□□□□□ -1.47
NUP54-204ENST00000506098 F8P00451 2351 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 IGHV1-69DA0A0B4J2H0 117 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 CRYM-AS1A6NIL9 109 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 OOSP1A8MZH6 123 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 HSD17B6O14756 317 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 NPFFO15130 113 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 ARPC1BO15143 372 aaKnown RBP5.83□□□□□ -1.48
NUP54-204ENST00000506098 PGLYRP1O75594 196 aaPredicted RBP5.83□□□□□ -1.48
NUP54-204ENST00000506098 IGHV1-69P01742 117 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 C1QBP02746 253 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 IL5P05113 134 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 PGAM2P15259 253 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 COX7A1P24310 79 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 PAX6P26367 422 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 IL3RAP26951 378 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 HTR1DP28221 377 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 DUTP33316 252 aaKnown RBP5.83□□□□□ -1.48
NUP54-204ENST00000506098 CEACAM3P40198 252 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 AKR1D1P51857 326 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 PIGPP57054 158 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 TAS2R31P59538 309 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 PRB3Q04118 309 aaPredicted RBP5.83□□□□□ -1.48
NUP54-204ENST00000506098 HABP2Q14520 560 aaPredicted RBP5.83□□□□□ -1.48
NUP54-204ENST00000506098 RPL39P5Q59GN2 51 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 TMEM128Q5BJH2 165 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 GPR157Q5UAW9 335 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 C9orf139Q6ZV77 190 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 KCTD9Q7L273 389 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 CMTM1Q8IZ96 169 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 LYG1Q8N1E2 194 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 TEX29Q8N6K0 151 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 TCTEX1D1Q8N7M0 179 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 CCDC71LQ8N9Z2 235 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 ADAD2Q8NCV1 583 aaKnown RBP5.83□□□□□ -1.48
NUP54-204ENST00000506098 OR10X1Q8NGY0 326 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 DTD1Q8TEA8 209 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 RTN4IP1Q8WWV3 396 aaPredicted RBP5.83□□□□□ -1.48
NUP54-204ENST00000506098 DDB2Q92466 427 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 R3HDM4Q96D70 268 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 MALSU1Q96EH3 234 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 GALNT14Q96FL9 552 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 ADTRPQ96IZ2 230 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 S1PR3Q99500 378 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 HSD17B10Q99714 261 aaKnown RBP5.83□□□□□ -1.48
NUP54-204ENST00000506098 MEGF9Q9H1U4 602 aa5.83□□□□□ -1.48
NUP54-204ENST00000506098 SLC2A9Q9NRM0 540 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms