RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 CT45A6P0DMU7 189 aa5.09□□□□□ -1.59
VCAN-206ENST00000505615 CT45A5P0DMU8 189 aa5.09□□□□□ -1.59
VCAN-206ENST00000505615 CT45A7P0DMV0 189 aa5.09□□□□□ -1.59
VCAN-206ENST00000505615 AREGP15514 252 aa5.09□□□□□ -1.59
VCAN-206ENST00000505615 RBM11P57052 281 aaKnown RBP5.09□□□□□ -1.59
VCAN-206ENST00000505615 RAP2BP61225 183 aa5.09□□□□□ -1.59
VCAN-206ENST00000505615 EXOSC2Q13868 293 aaKnown RBP5.09□□□□□ -1.59
VCAN-206ENST00000505615 SYT6Q5T7P8 510 aaPredicted RBP5.09□□□□□ -1.59
VCAN-206ENST00000505615 AADACL4Q5VUY2 407 aa5.09□□□□□ -1.59
VCAN-206ENST00000505615 TMEM244Q5VVB8 128 aa5.09□□□□□ -1.59
VCAN-206ENST00000505615 LPCAT4Q643R3 524 aa5.09□□□□□ -1.59
VCAN-206ENST00000505615 FAM90A2PQ658T7 463 aa5.09□□□□□ -1.59
VCAN-206ENST00000505615 FAM71F2Q6NXP2 309 aa5.09□□□□□ -1.59
VCAN-206ENST00000505615 GAPTQ8N292 157 aa5.09□□□□□ -1.59
VCAN-206ENST00000505615 STPG3Q8N7X2 389 aa5.09□□□□□ -1.59
VCAN-206ENST00000505615 OR52L2PQ8NGH6 319 aa5.09□□□□□ -1.59
VCAN-206ENST00000505615 OR2G2Q8NGZ5 317 aa5.09□□□□□ -1.59
VCAN-206ENST00000505615 MAP6D1Q9H9H5 199 aa5.09□□□□□ -1.59
VCAN-206ENST00000505615 FGFR1OP2Q9NVK5 253 aa5.09□□□□□ -1.59
VCAN-206ENST00000505615 HMCN2Q8NDA2 5059 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.08□□□□□ -1.6
VCAN-206ENST00000505615 OR5H14A6NHG9 310 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 NPIPB5A8MRT5 1133 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 C11orf94C9JXX5 98 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 H3BNX3 289 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 LGALS9O00182 355 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 GEMIN2O14893 280 aaKnown RBP5.08□□□□□ -1.6
VCAN-206ENST00000505615 SLC22A1O15245 554 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 DEFB4AO15263 64 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 SNX3O60493 162 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 RBBP9O75884 186 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 SPDEFO95238 335 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 HLA-AP01891 365 aaKnown RBP5.08□□□□□ -1.6
VCAN-206ENST00000505615 ISG15P05161 165 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 OCM2P0CE71 109 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 OCMP0CE72 109 aaPredicted RBP5.08□□□□□ -1.6
VCAN-206ENST00000505615 RPL35AP18077 110 aaKnown RBP5.08□□□□□ -1.6
VCAN-206ENST00000505615 RCC1P18754 421 aaPredicted RBP5.08□□□□□ -1.6
VCAN-206ENST00000505615 GALP22466 123 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 CBLN1P23435 193 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 LINC00205P59089 165 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 NANOS3P60323 173 aaKnown RBP5.08□□□□□ -1.6
VCAN-206ENST00000505615 ODF3L2Q3SX64 289 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 TP53I3Q53FA7 332 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 RPL39P5Q59GN2 51 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 LY6G6FQ5SQ64 297 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 C6orf183Q5T699 404 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 PVRIGQ6DKI7 326 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 BTNL8Q6UX41 500 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 HS3ST5Q8IZT8 346 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 UXS1Q8NBZ7 420 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 ADAD2Q8NCV1 583 aaKnown RBP5.08□□□□□ -1.6
VCAN-206ENST00000505615 SLC24A4Q8NFF2 622 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 OR4K15Q8NH41 348 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 TNFAIP8L1Q8WVP5 186 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 MRPS24Q96EL2 167 aaKnown RBP5.08□□□□□ -1.6
VCAN-206ENST00000505615 MAGIXQ9H6Y5 334 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 AKIP1Q9NQ31 210 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 OR2S2Q9NQN1 319 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 UBQLN2Q9UHD9 624 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 STEAP1Q9UHE8 339 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 JPT1Q9UK76 154 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 ST3GAL6Q9Y274 331 aa5.08□□□□□ -1.6
VCAN-206ENST00000505615 TRBV9A0A0B4J1U6 114 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 A8MWP6 167 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 PPP5D1E7EU14 171 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 SULT1B1O43704 296 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 YPEL1O60688 119 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 SCGB2A1O75556 95 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 IGKV1-16P04430 117 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 S100A9P06702 114 aaKnown RBP5.07□□□□□ -1.6
VCAN-206ENST00000505615 RHOGP84095 191 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 ZNF85Q03923 595 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 PJVKQ0ZLH3 352 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 GK3PQ14409 553 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 SMN1Q16637 294 aaKnown RBP5.07□□□□□ -1.6
VCAN-206ENST00000505615 MRGPRG-AS1Q2M3A8 158 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 MPV17LQ2QL34 196 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 ANKRD55Q3KP44 614 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 NXNL2Q5VZ03 156 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 DMKNQ6E0U4 476 aaPredicted RBP5.07□□□□□ -1.6
VCAN-206ENST00000505615 OR51A2Q8NGJ7 313 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 OR1L6Q8NGR2 347 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 OR13C3Q8NGS6 347 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 OR52N1Q8NH53 320 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 FAM46BQ96A09 425 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 TMEM68Q96MH6 324 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 YPEL2Q96QA6 119 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 RNF5Q99942 180 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 RARRES2Q99969 163 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 RNF126Q9BV68 326 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 TAF9BQ9HBM6 251 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 GPN1Q9HCN4 374 aaPredicted RBP5.07□□□□□ -1.6
VCAN-206ENST00000505615 RAB9BQ9NP90 201 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 SMPD3Q9NY59 655 aaPredicted RBP5.07□□□□□ -1.6
VCAN-206ENST00000505615 COA4Q9NYJ1 87 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 IL36GQ9NZH8 169 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 FAM30AQ9NZY2 134 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 TRAPPC2LQ9UL33 140 aa5.07□□□□□ -1.6
VCAN-206ENST00000505615 WASHC3Q9Y3C0 194 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms