RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 MEGF9Q9H1U4 602 aa11.25□□□□□ -0.61
LETM1-203ENST00000505551 PATE3B3GLJ2 98 aa11.25□□□□□ -0.61
LETM1-203ENST00000505551 RBFOX2O43251 390 aaKnown RBP eCLIP11.25□□□□□ -0.61
LETM1-203ENST00000505551 SPRY1O43609 319 aaPredicted RBP11.25□□□□□ -0.61
LETM1-203ENST00000505551 RPS18P62269 152 aaKnown RBP11.25□□□□□ -0.61
LETM1-203ENST00000505551 PSG4Q00888 419 aa11.25□□□□□ -0.61
LETM1-203ENST00000505551 PRR27Q6MZM9 219 aa11.25□□□□□ -0.61
LETM1-203ENST00000505551 SLC25A47Q6Q0C1 308 aa11.25□□□□□ -0.61
LETM1-203ENST00000505551 OR2M7Q8NG81 312 aa11.25□□□□□ -0.61
LETM1-203ENST00000505551 OR4F17Q8NGA8 305 aa11.25□□□□□ -0.61
LETM1-203ENST00000505551 FER1L5A0AVI2 2057 aa11.25□□□□□ -0.61
LETM1-203ENST00000505551 C11orf94C9JXX5 98 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 REG1AP05451 166 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 CLRN1P58418 232 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 GNB1P62873 340 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 ARG2P78540 354 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 PIGYQ3MUY2 71 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 LRRC10Q5BKY1 277 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 RNFT1Q5M7Z0 435 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 MUC15Q8N387 334 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 ZNF114Q8NC26 417 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 GMPPAQ96IJ6 420 aaPredicted RBP11.24□□□□□ -0.61
LETM1-203ENST00000505551 LRFN3Q9BTN0 628 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 VCX2Q9H322 139 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 PSENENQ9NZ42 101 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 RALGAPA1Q6GYQ0 2036 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 NCOA6Q14686 2063 aaPredicted RBP11.24□□□□□ -0.61
LETM1-203ENST00000505551 K7ERU9 68 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 SYNGR2O43760 224 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 IGKV3-11P04433 115 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 SNAI3Q3KNW1 292 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 LYSMD4Q5XG99 296 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 OR2M3Q8NG83 312 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 CLDN23Q96B33 292 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 ZNF501Q96CX3 271 aaPredicted RBP11.24□□□□□ -0.61
LETM1-203ENST00000505551 TAAR6Q96RI8 345 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 ASPMQ8IZT6 3477 aa11.24□□□□□ -0.61
LETM1-203ENST00000505551 SDK2Q58EX2 2172 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 IGKV1D-13A0A0B4J2D9 117 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 UBE2L5PA0A1B0GUS4 154 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 MDFIC2A0A1B0GVS7 189 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 PDCD6O75340 191 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 IGKV1-13P0DP09 117 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 IAPPP10997 89 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 CLDN18P56856 261 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 CCL7P80098 99 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 HLA-DQA1Q5Y7H0 255 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 AKIRIN1Q9H9L7 192 aaPredicted RBP11.23□□□□□ -0.61
LETM1-203ENST00000505551 GNB4Q9HAV0 340 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 IGKV1-27A0A075B6S5 117 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 DPRXA6NFQ7 191 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 SLC22A20A6NK97 555 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 SHISA8B8ZZ34 492 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 PDE6DO43924 150 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 C3orf79P0CE67 100 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 AMTP48728 403 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 RAET1LQ5VY80 246 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 Q6ZS49 121 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 KCNS1Q96KK3 526 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 FAM110AQ9BQ89 295 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 TTC28Q96AY4 2481 aa11.23□□□□□ -0.61
LETM1-203ENST00000505551 LIPT2A6NK58 231 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 ZNF891A8MT65 544 aaPredicted RBP11.22□□□□□ -0.61
LETM1-203ENST00000505551 NAPSAO96009 420 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 KITLGP21583 273 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 PLCXD2Q0VAA5 305 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 RAB31Q13636 194 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 HLA-BQ31612 363 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 Q6ZRM9 215 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 OR10G9Q8NGN4 311 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 OR10G7Q8NGN6 311 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 CITED2Q99967 270 aaPredicted RBP11.22□□□□□ -0.61
LETM1-203ENST00000505551 ALKBH4Q9NXW9 302 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 ATP23Q9Y6H3 246 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 TRBV7-9A0A0J9YWB2 115 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 A0A1W2PQM1 296 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 ODAMA1E959 279 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 TUSC2O75896 110 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 CNIH1O95406 144 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 OSR2Q8N2R0 312 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 PRR7Q8TB68 274 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 RAB1CQ92928 201 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 IGKV1-12A0A0C4DH73 117 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 A0A1B0GX78 115 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 DEGS1O15121 323 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 IGKV1D-12P01611 117 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 EGR1P18146 543 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 COL5A1P20908 1838 aaPredicted RBP11.22□□□□□ -0.61
LETM1-203ENST00000505551 TIMP3P35625 211 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 SLC38A11Q08AI6 406 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 MALLQ13021 153 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 HLA-DRB5Q30154 266 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 NIT1Q86X76 327 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 DAZAP1Q96EP5 407 aaKnown RBP11.22□□□□□ -0.61
LETM1-203ENST00000505551 DERL1Q9BUN8 251 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 WNT10AQ9GZT5 417 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 CCL28Q9NRJ3 127 aa11.22□□□□□ -0.61
LETM1-203ENST00000505551 TMEM265A0A087WTH1 108 aa11.21□□□□□ -0.61
LETM1-203ENST00000505551 TRBV9A0A0B4J1U6 114 aa11.21□□□□□ -0.61
LETM1-203ENST00000505551 A0A1W2PS18 150 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms