RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 POLR3KQ9Y2Y1 108 aaPredicted RBP9.93□□□□□ -0.82
UBE3D-206ENST00000505226 A0A0U1RQK1 487 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 ZNF320A2RRD8 509 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 RNF212BA8MTL3 300 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 SH2D1BO14796 132 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 HAND1O96004 215 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 CDC34P49427 236 aaPredicted RBP9.92□□□□□ -0.82
UBE3D-206ENST00000505226 MSMO1Q15800 293 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 ACOT6Q3I5F7 207 aaPredicted RBP9.92□□□□□ -0.82
UBE3D-206ENST00000505226 DCAF12Q5T6F0 453 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 GALMQ96C23 342 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 PTPRBP23467 1997 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 IGHV3-43A0A0B4J1X8 118 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 DEFB108AA8MXU0 73 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 IGHV3-43DP0DP04 118 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 TRIP6Q15654 476 aaKnown RBP9.92□□□□□ -0.82
UBE3D-206ENST00000505226 C6orf15Q6UXA7 325 aaPredicted RBP9.92□□□□□ -0.82
UBE3D-206ENST00000505226 COQ2Q96H96 371 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 PATZ1Q9HBE1 687 aaKnown RBP9.92□□□□□ -0.82
UBE3D-206ENST00000505226 PXMP4Q9Y6I8 212 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 PDGFBP01127 241 aaPredicted RBP9.92□□□□□ -0.82
UBE3D-206ENST00000505226 SSTR5P35346 364 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 EDDM3BP56851 147 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 RAB4BP61018 213 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 OR1C1Q15619 314 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 CST9LP1Q5W188 147 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 LINC00696Q6ZRV3 163 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 MRGPRDQ8TDS7 321 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 QTRT1Q9BXR0 403 aaKnown RBP9.92□□□□□ -0.82
UBE3D-206ENST00000505226 METRNQ9UJH8 293 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 TRAPPC1Q9Y5R8 145 aa9.92□□□□□ -0.82
UBE3D-206ENST00000505226 SMPD2O60906 423 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 CLDN14O95500 239 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 TDRG1Q3Y452 100 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 C11orf53Q8IXP5 236 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 ZNF709Q8N972 641 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 RFESDQ8TAC1 157 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 DIRC2Q96SL1 478 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 FKBP11Q9NYL4 201 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 TP53TG3Q9ULZ0 132 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 TMPRSS2O15393 492 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 PROP1O75360 226 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 RBMXL2O75526 392 aaKnown RBP9.91□□□□□ -0.82
UBE3D-206ENST00000505226 WISP2O76076 250 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 SCGB1D1O95968 90 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 OR9G9P0C7N8 305 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 HNF1AP20823 631 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 LCN2P80188 198 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 H2BFWTQ7Z2G1 175 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 DCTN5Q9BTE1 182 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 ELOVL5Q9NYP7 299 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 POLDIP2Q9Y2S7 368 aa9.91□□□□□ -0.82
UBE3D-206ENST00000505226 GRIFINA4D1Z8 144 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 RRHO14718 337 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 CCKARP32238 428 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 LINC00310P59036 64 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 PPP1CBP62140 327 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 PSG7Q13046 419 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 IQCJQ1A5X6 159 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 KCNIP4Q6PIL6 250 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 FIP1L1Q6UN15 594 aaKnown RBP9.9□□□□□ -0.82
UBE3D-206ENST00000505226 Q8IYB0 196 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 SGMS2Q8NHU3 365 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 TMEM30CPA0ZSE6 113 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 RAB29O14966 203 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 FRMD6-AS1P0C7T7 363 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 ADMP35318 185 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 MPV17P39210 176 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 CASP6P55212 293 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 LRP11Q86VZ4 500 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 MCEMP1Q8IX19 187 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 ZBTB34Q8NCN2 500 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 SLC25A40Q8TBP6 338 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 PLPPR2Q96GM1 343 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 IER2Q9BTL4 223 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 HES4Q9HCC6 221 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 KCNIP1Q9NZI2 227 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 WDR83OSQ9Y284 106 aa9.9□□□□□ -0.82
UBE3D-206ENST00000505226 MARCH11A6NNE9 402 aa9.9□□□□□ -0.83
UBE3D-206ENST00000505226 RAC2P15153 192 aa9.9□□□□□ -0.83
UBE3D-206ENST00000505226 CD1BP29016 333 aa9.9□□□□□ -0.83
UBE3D-206ENST00000505226 B4GALT7Q9UBV7 327 aa9.9□□□□□ -0.83
UBE3D-206ENST00000505226 SMG1Q96Q15 3661 aaKnown RBP9.89□□□□□ -0.83
UBE3D-206ENST00000505226 SOX8P57073 446 aa9.89□□□□□ -0.83
UBE3D-206ENST00000505226 ERVFC1-1P60608 527 aa9.89□□□□□ -0.83
UBE3D-206ENST00000505226 FOXL1Q12952 345 aa9.89□□□□□ -0.83
UBE3D-206ENST00000505226 C1orf194Q5T5A4 169 aa9.89□□□□□ -0.83
UBE3D-206ENST00000505226 ABHD17BQ5VST6 288 aa9.89□□□□□ -0.83
UBE3D-206ENST00000505226 FBXW9Q5XUX1 488 aa9.89□□□□□ -0.83
UBE3D-206ENST00000505226 C1orf159Q96HA4 380 aa9.89□□□□□ -0.83
UBE3D-206ENST00000505226 SFRP2Q96HF1 295 aa9.89□□□□□ -0.83
UBE3D-206ENST00000505226 IMMP2LQ96T52 175 aa9.89□□□□□ -0.83
UBE3D-206ENST00000505226 HCFC1P51610 2035 aa9.89□□□□□ -0.83
UBE3D-206ENST00000505226 TET2Q6N021 2002 aaPredicted RBP9.89□□□□□ -0.83
UBE3D-206ENST00000505226 A0A1W2PNU3 283 aaPredicted RBP9.89□□□□□ -0.83
UBE3D-206ENST00000505226 SOX15O60248 233 aa9.89□□□□□ -0.83
UBE3D-206ENST00000505226 ARL14EPLP0DKL9 152 aa9.89□□□□□ -0.83
UBE3D-206ENST00000505226 THBS3P49746 956 aa9.89□□□□□ -0.83
UBE3D-206ENST00000505226 DUSP3P51452 185 aaPredicted RBP9.89□□□□□ -0.83
UBE3D-206ENST00000505226 VKORC1L1Q8N0U8 176 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms