RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ZC4H2Q9NQZ6 224 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 PLEKHJ1Q9NW61 149 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 BABAM2Q9NXR7 383 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 TECRQ9NZ01 308 aaKnown RBP5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 CLEC2DQ9UHP7 191 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 S4R3C0 116 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 HERC2O95714 4834 aa5.15□□□□□ -1.59
NPIPB3-203ENST00000504841 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 ITGB1BP1O14713 200 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 GGCTO75223 188 aaKnown RBP5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 NAPSAO96009 420 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 CRYGBP07316 175 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 CBLN1P23435 193 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 APOC4P55056 127 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 RPS27AP62979 156 aaKnown RBP5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 TNFRSF9Q07011 255 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 RTL8BQ17RB0 113 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 C15orf32Q32M92 178 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 VMA21Q3ZAQ7 101 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 TM4SF20Q53R12 229 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 C10orf55Q5SWW7 151 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 LGALS9CQ6DKI2 356 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 ZNF880Q6PDB4 577 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 BTNL8Q6UX41 500 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 CLEC19AQ6UXS0 136 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 C19orf35Q6ZS72 473 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 TMEM217Q8N7C4 229 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 DERL3Q96Q80 235 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 FGF20Q9NP95 211 aaPredicted RBP5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 MRPS18AQ9NVS2 196 aaKnown RBP5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 RDH8Q9NYR8 311 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 FBXL17Q9UF56 701 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 MLXQ9UH92 298 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 UBQLN2Q9UHD9 624 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 AK3Q9UIJ7 227 aa5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 EXOSC1Q9Y3B2 195 aaKnown RBP5.14□□□□□ -1.59
NPIPB3-203ENST00000504841 LOC100130705A0A1B0GUX0 176 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 TMEM213A2RRL7 107 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 SRRM4A7MD48 611 aaKnown RBP5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 ACTL6BO94805 426 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 CRYZL1O95825 349 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 CD3GP09693 182 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 RPL35AP18077 110 aaKnown RBP5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 DCKP27707 260 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 ARL3P36405 182 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 UNC119Q13432 240 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 INSL4Q14641 139 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 PRSS8Q16651 343 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 MRGPRG-AS1Q2M3A8 158 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 ANKRD55Q3KP44 614 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 CDH26Q8IXH8 852 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 UXS1Q8NBZ7 420 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 NECAP1Q8NC96 275 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 OR1L6Q8NGR2 347 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 FBLIM1Q8WUP2 373 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 PTX4Q96A99 478 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 UQCC2Q9BRT2 126 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 MRPL18Q9H0U6 180 aaKnown RBP5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 Q9N2K0 584 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 C12orf4Q9NQ89 552 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 GHRLQ9UBU3 117 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 FBXL7Q9UJT9 491 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 TP53TG1Q9Y2A0 90 aa5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 RBM7Q9Y580 266 aaKnown RBP5.13□□□□□ -1.59
NPIPB3-203ENST00000504841 PLECQ15149 4684 aaKnown RBP5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 A0A0A6YYD4 124 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 TRBV9A0A0B4J1U6 114 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 IGHV3-35A0A0C4DH35 117 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 IGKV1-6A0A0C4DH72 117 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 DPPA5A6NC42 116 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 HMX3A6NHT5 357 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 BET1O15155 118 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 SOCS1O15524 211 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 XRCC3O43542 346 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 WBP4O75554 376 aaKnown RBP5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 UBBP0CG47 229 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 CTRB1P17538 263 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 FCGR2BP31994 310 aaPredicted RBP5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 NANOS2P60321 138 aaKnown RBP5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 MED21Q13503 144 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 TMEM177Q53S58 311 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 RBM48Q5RL73 367 aaKnown RBP5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 CTRB2Q6GPI1 263 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 RBPMS2Q6ZRY4 209 aaKnown RBP5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 Q6ZWC4 215 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 CEACAM19Q7Z692 300 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 WFDC3Q8IUB2 231 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 STPG3Q8N7X2 389 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 C5orf30Q96GV9 206 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 FYTTD1Q96QD9 318 aaKnown RBP5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 SPIN2AQ99865 258 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 SPIN2BQ9BPZ2 258 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 CMSS1Q9BQ75 279 aaKnown RBP5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 TM2D1Q9BX74 207 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 RIMS4Q9H426 269 aaPredicted RBP5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 ZNF430Q9H8G1 570 aaPredicted RBP5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 SDHAF2Q9NX18 166 aa5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 DIMT1Q9UNQ2 313 aaKnown RBP5.12□□□□□ -1.59
NPIPB3-203ENST00000504841 TRBV6-6A0A0A6YYG2 114 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms