RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 RAB3CQ96E17 227 aa10.86□□□□□ -0.67
PDLIM7-211ENST00000504318 UBE2E2Q96LR5 201 aa10.86□□□□□ -0.67
PDLIM7-211ENST00000504318 RNF5Q99942 180 aa10.86□□□□□ -0.67
PDLIM7-211ENST00000504318 SOSTQ9BQB4 213 aa10.86□□□□□ -0.67
PDLIM7-211ENST00000504318 MCRIP2Q9BUT9 160 aaKnown RBP10.86□□□□□ -0.67
PDLIM7-211ENST00000504318 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.86□□□□□ -0.67
PDLIM7-211ENST00000504318 PARP11Q9NR21 331 aa10.86□□□□□ -0.67
PDLIM7-211ENST00000504318 EXTL2Q9UBQ6 330 aa10.86□□□□□ -0.67
PDLIM7-211ENST00000504318 RNF150Q9ULK6 438 aa10.86□□□□□ -0.67
PDLIM7-211ENST00000504318 WASHC3Q9Y3C0 194 aa10.86□□□□□ -0.67
PDLIM7-211ENST00000504318 FABP7O15540 132 aa10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 RBBP9O75884 186 aa10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 TPPPO94811 219 aa10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 CRYGBP07316 175 aa10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 ELK1P19419 428 aa10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 MC5RP33032 325 aa10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 RAB9AP51151 201 aa10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 LUMP51884 338 aaPredicted RBP10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 GNB1P62873 340 aa10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 PITPNAQ00169 270 aa10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 PSG5Q15238 335 aa10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 SRSF7Q16629 238 aaKnown RBP eCLIP10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 PYDC2Q56P42 97 aa10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 ZNF660Q6AZW8 331 aaPredicted RBP10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 LGALS14Q8TCE9 139 aa10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 C15orf40Q8WUR7 153 aa10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 MAFIPQ8WZ33 124 aa10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 GPR61Q9BZJ8 451 aa10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 ZNF230Q9UIE0 474 aaPredicted RBP10.85□□□□□ -0.67
PDLIM7-211ENST00000504318 ARPC1BO15143 372 aaKnown RBP10.84□□□□□ -0.67
PDLIM7-211ENST00000504318 PTTG1O95997 202 aa10.84□□□□□ -0.67
PDLIM7-211ENST00000504318 IL18Q14116 193 aa10.84□□□□□ -0.67
PDLIM7-211ENST00000504318 ZNF79Q15937 498 aa10.84□□□□□ -0.67
PDLIM7-211ENST00000504318 TRIM16LQ309B1 348 aa10.84□□□□□ -0.67
PDLIM7-211ENST00000504318 HACD4Q5VWC8 232 aa10.84□□□□□ -0.67
PDLIM7-211ENST00000504318 PYHIN1Q6K0P9 492 aa10.84□□□□□ -0.67
PDLIM7-211ENST00000504318 LYSMD2Q8IV50 215 aa10.84□□□□□ -0.67
PDLIM7-211ENST00000504318 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.84□□□□□ -0.67
PDLIM7-211ENST00000504318 OR11H1Q8NG94 326 aa10.84□□□□□ -0.67
PDLIM7-211ENST00000504318 DDB2Q92466 427 aa10.84□□□□□ -0.67
PDLIM7-211ENST00000504318 SDHAF2Q9NX18 166 aa10.84□□□□□ -0.67
PDLIM7-211ENST00000504318 KIAA1456Q9P272 454 aa10.84□□□□□ -0.67
PDLIM7-211ENST00000504318 HSPA12AO43301 675 aa10.83□□□□□ -0.68
PDLIM7-211ENST00000504318 SPDEFO95238 335 aa10.83□□□□□ -0.68
PDLIM7-211ENST00000504318 EIF4EP06730 217 aaKnown RBP10.83□□□□□ -0.68
PDLIM7-211ENST00000504318 TRIQKQ629K1 86 aa10.83□□□□□ -0.68
PDLIM7-211ENST00000504318 ZNF562Q6V9R5 426 aa10.83□□□□□ -0.68
PDLIM7-211ENST00000504318 PDPNQ86YL7 162 aa10.83□□□□□ -0.68
PDLIM7-211ENST00000504318 H1FOOQ8IZA3 346 aaPredicted RBP10.83□□□□□ -0.68
PDLIM7-211ENST00000504318 ALX4Q9H161 411 aaPredicted RBP10.83□□□□□ -0.68
PDLIM7-211ENST00000504318 VSIG4Q9Y279 399 aa10.83□□□□□ -0.68
PDLIM7-211ENST00000504318 LSM4Q9Y4Z0 139 aaKnown RBP10.83□□□□□ -0.68
PDLIM7-211ENST00000504318 SORL1Q92673 2214 aa10.82□□□□□ -0.68
PDLIM7-211ENST00000504318 SRRM4A7MD48 611 aaKnown RBP10.82□□□□□ -0.68
PDLIM7-211ENST00000504318 CA2P00918 260 aa10.82□□□□□ -0.68
PDLIM7-211ENST00000504318 IL7P13232 177 aa10.82□□□□□ -0.68
PDLIM7-211ENST00000504318 INPP1P49441 399 aa10.82□□□□□ -0.68
PDLIM7-211ENST00000504318 OXA1LQ15070 435 aa10.82□□□□□ -0.68
PDLIM7-211ENST00000504318 ECSCRQ19T08 205 aa10.82□□□□□ -0.68
PDLIM7-211ENST00000504318 CENPSQ8N2Z9 138 aa10.82□□□□□ -0.68
PDLIM7-211ENST00000504318 Q8N402 240 aa10.82□□□□□ -0.68
PDLIM7-211ENST00000504318 TCTEX1D1Q8N7M0 179 aa10.82□□□□□ -0.68
PDLIM7-211ENST00000504318 OR5M8Q8NGP6 311 aa10.82□□□□□ -0.68
PDLIM7-211ENST00000504318 OR5H6Q8NGV6 325 aa10.82□□□□□ -0.68
PDLIM7-211ENST00000504318 CASTOR1Q8WTX7 329 aa10.82□□□□□ -0.68
PDLIM7-211ENST00000504318 S100A16Q96FQ6 103 aaKnown RBP10.82□□□□□ -0.68
PDLIM7-211ENST00000504318 SDHCQ99643 169 aaPredicted RBP10.82□□□□□ -0.68
PDLIM7-211ENST00000504318 FAM103A1Q9BTL3 118 aaKnown RBP10.82□□□□□ -0.68
PDLIM7-211ENST00000504318 OR2D2Q9H210 308 aa10.82□□□□□ -0.68
PDLIM7-211ENST00000504318 A0A1W2PN81 502 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 H7C2Y5 167 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 M0R1X1 148 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 BET1O15155 118 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 IGLV2-14P01704 120 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 OR8U9P0C7N5 309 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 DTYMKP23919 212 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 CHRNA7P36544 502 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 MRPS10P82664 201 aaKnown RBP10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 IFITM3Q01628 133 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 PJVKQ0ZLH3 352 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 ZNF260Q3ZCT1 412 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 AKIRIN2Q53H80 203 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 TMEM177Q53S58 311 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 C11orf87Q6NUJ2 197 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 Q6ZNX1 250 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 POC5Q8NA72 575 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 B9D2Q9BPU9 175 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 RHBDL2Q9NX52 303 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 METTL1Q9UBP6 276 aaKnown RBP10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 ZNF221Q9UK13 617 aa10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 FOXA2Q9Y261 457 aaPredicted RBP10.81□□□□□ -0.68
PDLIM7-211ENST00000504318 LINC00473A8K010 186 aa10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 CTDSPLO15194 276 aa10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 SSX5O60225 188 aa10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 SCGNO76038 276 aa10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 HLA-DQB1P01920 261 aa10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 GSTP1P09211 210 aaKnown RBP10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 DUTP33316 252 aaKnown RBP10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 RAB25P57735 213 aa10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 DGCR2P98153 550 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms