RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 GABRA4P48169 554 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 RANP62826 216 aaKnown RBP2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 BSPH1Q075Z2 132 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 WHAMMP3Q1A5X7 153 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 TRMT12Q53H54 448 aaKnown RBP2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 HES3Q5TGS1 186 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 VN1R4Q7Z5H5 301 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 OR4K13Q8NH42 304 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 C16orf78Q8WTQ4 265 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 TAMM41Q96BW9 452 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 ZHX1-C8orf76Q96EF9 292 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 BTF3L4Q96K17 158 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 PCBD2Q9H0N5 130 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 C11orf49Q9H6J7 331 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 ARMC1Q9NVT9 282 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 GLS2Q9UI32 602 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 VPREB3Q9UKI3 123 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 YLPM1P49750 1951 aaKnown RBP2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 ERCC6Q03468 1493 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 WDR7Q9Y4E6 1490 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 DCAF1Q9Y4B6 1507 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 MYO5BQ9ULV0 1848 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 NAV1Q8NEY1 1877 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 IGSF23A1L1A6 192 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 C3orf84H3BNL1 204 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 ZNF73O43830 326 aaPredicted RBP2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 ARL6IP5O75915 188 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 LINC00614P0C842 121 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 HIST1H1EP10412 219 aaKnown RBP2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 SCGB1A1P11684 91 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 IFI30P13284 250 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 CXCL2P19875 107 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 CXCL3P19876 107 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 GZMHP20718 246 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 SRP9P49458 86 aaKnown RBP2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 AP1S1P61966 158 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 BTN3A2P78410 334 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 OR8G1Q15617 311 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 SPATA31B1PQ5VZV4 182 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 COMMD7Q86VX2 200 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 PHF13Q86YI8 300 aaPredicted RBP2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 C12orf43Q96C57 262 aaKnown RBP2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 TIPINQ9BVW5 301 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 MROQ9BYG7 248 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 GTSF1LQ9H1H1 148 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 DNAJC12Q9UKB3 198 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 FIS1Q9Y3D6 152 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 A0A1W2PP64 1363 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 CAMSAP1Q5T5Y3 1602 aa2.31□□□□□ -2.04
TRAPPC13-205ENST00000504243 DISC1C4P0D8 188 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 BHLHE40O14503 412 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 NDUFA2O43678 99 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 CST8O60676 142 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 PFDN1O60925 122 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 CRYGDP07320 174 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 MIPP30301 263 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 AGTR1P30556 359 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 SULT1A1P50225 295 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 AKR1C2P52895 323 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 TCL1AP56279 114 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 TAF1AQ15573 450 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 TSNQ15631 228 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 C1orf195Q5TG92 126 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 ZNF322Q6U7Q0 402 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 SLC36A1Q7Z2H8 476 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 LYG2Q86SG7 212 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 CLVS1Q8IUQ0 354 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 STX19Q8N4C7 294 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 NATD1Q8N6N6 113 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 TMEM161BQ8NDZ6 487 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 EEF1AKMT1Q8WVE0 214 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 IMP4Q96G21 291 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 SFRP2Q96HF1 295 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 CCDC90BQ9GZT6 254 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 TLNRD1Q9H1K6 362 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 OR51I1Q9H343 314 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 BOLA2Q9H3K6 86 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 LINC00527Q9UJ94 153 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 FBXO5Q9UKT4 447 aa2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 LSM5Q9Y4Y9 91 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 PCF11O94913 1555 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-205ENST00000504243 NLRC5Q86WI3 1866 aa2.29□□□□□ -2.04
TRAPPC13-205ENST00000504243 NUP155O75694 1391 aa2.29□□□□□ -2.04
TRAPPC13-205ENST00000504243 TGIF2-C20orf24A0A0A6YYL0 155 aa2.29□□□□□ -2.04
TRAPPC13-205ENST00000504243 EVPLLA8MZ36 301 aa2.29□□□□□ -2.04
TRAPPC13-205ENST00000504243 APOC1P02654 83 aa2.29□□□□□ -2.04
TRAPPC13-205ENST00000504243 KCNE1P15382 129 aa2.29□□□□□ -2.04
TRAPPC13-205ENST00000504243 MYL12AP19105 171 aa2.29□□□□□ -2.04
TRAPPC13-205ENST00000504243 PSMB3P49720 205 aa2.29□□□□□ -2.04
TRAPPC13-205ENST00000504243 SLC35A2P78381 396 aa2.29□□□□□ -2.04
TRAPPC13-205ENST00000504243 OR2F1Q13607 317 aa2.29□□□□□ -2.04
TRAPPC13-205ENST00000504243 HIST3H3Q16695 136 aa2.29□□□□□ -2.04
TRAPPC13-205ENST00000504243 LRRC75BQ2VPJ9 315 aa2.29□□□□□ -2.04
TRAPPC13-205ENST00000504243 HIST2H3PS2Q5TEC6 136 aa2.29□□□□□ -2.04
TRAPPC13-205ENST00000504243 TNFAIP8L2Q6P589 184 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC13-205ENST00000504243 SCGB1D4Q6XE38 83 aa2.29□□□□□ -2.04
TRAPPC13-205ENST00000504243 RASSF6Q6ZTQ3 369 aa2.29□□□□□ -2.04
TRAPPC13-205ENST00000504243 S100A7AQ86SG5 101 aa2.29□□□□□ -2.04
TRAPPC13-205ENST00000504243 DHFR2Q86XF0 187 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms