RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 ITPR1Q14643 2758 aa17.55■□□□□ 0.4
UBE2D3-216ENST00000503742 NDUFB3O43676 98 aa17.55■□□□□ 0.4
UBE2D3-216ENST00000503742 LRRC10Q5BKY1 277 aa17.55■□□□□ 0.4
UBE2D3-216ENST00000503742 TMEM200BQ69YZ2 307 aa17.55■□□□□ 0.4
UBE2D3-216ENST00000503742 FAM90A9PA6NNJ1 464 aa17.54■□□□□ 0.4
UBE2D3-216ENST00000503742 NDUFA2O43678 99 aa17.54■□□□□ 0.4
UBE2D3-216ENST00000503742 DFFBO76075 338 aa17.54■□□□□ 0.4
UBE2D3-216ENST00000503742 F2RL1P55085 397 aa17.54■□□□□ 0.4
UBE2D3-216ENST00000503742 MRPS11P82912 194 aaKnown RBP17.54■□□□□ 0.4
UBE2D3-216ENST00000503742 ARL16Q0P5N6 197 aa17.54■□□□□ 0.4
UBE2D3-216ENST00000503742 AARDQ4LEZ3 155 aa17.54■□□□□ 0.4
UBE2D3-216ENST00000503742 HAPLN4Q86UW8 402 aa17.54■□□□□ 0.4
UBE2D3-216ENST00000503742 S1PR3Q99500 378 aa17.54■□□□□ 0.4
UBE2D3-216ENST00000503742 TSPAN9O75954 239 aa17.53■□□□□ 0.4
UBE2D3-216ENST00000503742 APOC3P02656 99 aa17.53■□□□□ 0.4
UBE2D3-216ENST00000503742 HFEQ30201 348 aa17.53■□□□□ 0.4
UBE2D3-216ENST00000503742 TMEM14EPQ6UXP3 125 aa17.53■□□□□ 0.4
UBE2D3-216ENST00000503742 HEPN1Q6WQI6 88 aa17.53■□□□□ 0.4
UBE2D3-216ENST00000503742 LYG1Q8N1E2 194 aa17.53■□□□□ 0.4
UBE2D3-216ENST00000503742 ZNF714Q96N38 554 aa17.53■□□□□ 0.4
UBE2D3-216ENST00000503742 STRAPQ9Y3F4 350 aaKnown RBP17.53■□□□□ 0.4
UBE2D3-216ENST00000503742 DVL1O14640 695 aa17.53■□□□□ 0.4
UBE2D3-216ENST00000503742 METTL15P1P0C7V9 234 aa17.53■□□□□ 0.4
UBE2D3-216ENST00000503742 ARHGDIBP52566 201 aa17.53■□□□□ 0.4
UBE2D3-216ENST00000503742 MS4A7Q9GZW8 240 aaPredicted RBP17.53■□□□□ 0.4
UBE2D3-216ENST00000503742 RFNGQ9Y644 331 aa17.53■□□□□ 0.4
UBE2D3-216ENST00000503742 TMEM8BA6NDV4 472 aa17.52■□□□□ 0.4
UBE2D3-216ENST00000503742 ZG16O60844 167 aa17.52■□□□□ 0.4
UBE2D3-216ENST00000503742 OR9G9P0C7N8 305 aa17.52■□□□□ 0.4
UBE2D3-216ENST00000503742 DAOP14920 347 aa17.52■□□□□ 0.4
UBE2D3-216ENST00000503742 CCL3L1P16619 93 aa17.52■□□□□ 0.4
UBE2D3-216ENST00000503742 THBS3P49746 956 aa17.52■□□□□ 0.4
UBE2D3-216ENST00000503742 GNG10P50151 68 aa17.52■□□□□ 0.4
UBE2D3-216ENST00000503742 PPOXP50336 477 aa17.52■□□□□ 0.4
UBE2D3-216ENST00000503742 ERVFRD-1P60508 538 aa17.52■□□□□ 0.4
UBE2D3-216ENST00000503742 SRSF3P84103 164 aaKnown RBP17.52■□□□□ 0.4
UBE2D3-216ENST00000503742 SPANXN5Q5MJ07 72 aa17.52■□□□□ 0.4
UBE2D3-216ENST00000503742 OR2G3Q8NGZ4 309 aa17.52■□□□□ 0.4
UBE2D3-216ENST00000503742 GNPNAT1Q96EK6 184 aaPredicted RBP17.52■□□□□ 0.4
UBE2D3-216ENST00000503742 ADTRPQ96IZ2 230 aa17.52■□□□□ 0.4
UBE2D3-216ENST00000503742 C1QL1O75973 258 aa17.51■□□□□ 0.39
UBE2D3-216ENST00000503742 FSTL3O95633 263 aa17.51■□□□□ 0.39
UBE2D3-216ENST00000503742 FHITP49789 147 aa17.51■□□□□ 0.39
UBE2D3-216ENST00000503742 TMEM182Q6ZP80 229 aaPredicted RBP17.51■□□□□ 0.39
UBE2D3-216ENST00000503742 OR4S2Q8NH73 311 aa17.51■□□□□ 0.39
UBE2D3-216ENST00000503742 NQO2P16083 231 aa17.51■□□□□ 0.39
UBE2D3-216ENST00000503742 COL8A2P25067 703 aa17.51■□□□□ 0.39
UBE2D3-216ENST00000503742 ZNF525Q8N782 197 aa17.51■□□□□ 0.39
UBE2D3-216ENST00000503742 ZNF383Q8NA42 475 aa17.51■□□□□ 0.39
UBE2D3-216ENST00000503742 TMEM218A2RU14 115 aa17.5■□□□□ 0.39
UBE2D3-216ENST00000503742 CAMLGP49069 296 aa17.5■□□□□ 0.39
UBE2D3-216ENST00000503742 HBG1P69891 147 aa17.5■□□□□ 0.39
UBE2D3-216ENST00000503742 HBG2P69892 147 aa17.5■□□□□ 0.39
UBE2D3-216ENST00000503742 DTD1Q8TEA8 209 aa17.5■□□□□ 0.39
UBE2D3-216ENST00000503742 H1FXQ92522 213 aaKnown RBP17.5■□□□□ 0.39
UBE2D3-216ENST00000503742 UMAD1C9J7I0 102 aa17.49■□□□□ 0.39
UBE2D3-216ENST00000503742 RUNX1Q01196 453 aa17.49■□□□□ 0.39
UBE2D3-216ENST00000503742 AKR1C1Q04828 323 aa17.49■□□□□ 0.39
UBE2D3-216ENST00000503742 OR4C12Q96R67 309 aa17.49■□□□□ 0.39
UBE2D3-216ENST00000503742 QTRT1Q9BXR0 403 aaKnown RBP17.49■□□□□ 0.39
UBE2D3-216ENST00000503742 MED19A0JLT2 244 aaPredicted RBP17.49■□□□□ 0.39
UBE2D3-216ENST00000503742 IFNA5P01569 189 aa17.49■□□□□ 0.39
UBE2D3-216ENST00000503742 PRH1P02810 166 aa17.49■□□□□ 0.39
UBE2D3-216ENST00000503742 DLX6P56179 175 aa17.49■□□□□ 0.39
UBE2D3-216ENST00000503742 CLRN3Q8NCR9 226 aa17.49■□□□□ 0.39
UBE2D3-216ENST00000503742 ZDHHC16Q969W1 377 aa17.49■□□□□ 0.39
UBE2D3-216ENST00000503742 NARS2Q96I59 477 aaKnown RBP17.49■□□□□ 0.39
UBE2D3-216ENST00000503742 CIB3Q96Q77 187 aaPredicted RBP17.49■□□□□ 0.39
UBE2D3-216ENST00000503742 HIVEP3Q5T1R4 2406 aa17.49■□□□□ 0.39
UBE2D3-216ENST00000503742 ABCA4P78363 2273 aa17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 LYNX1G3V0Z9 82 aa17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 DNASE2O00115 360 aaPredicted RBP17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 PPIHO43447 177 aaKnown RBP17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 RBMXL2O75526 392 aaKnown RBP17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 LYNX1P0DP58 116 aa17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 ERVK-16P61578 105 aa17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 SSX9Q7RTT3 188 aa17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 NKX6-2Q9C056 277 aaPredicted RBP17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 ZNRD1Q9P1U0 126 aa17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 DOCK11Q5JSL3 2073 aa17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 PMS2P5A8MQ11 134 aa17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 CT45A6P0DMU7 189 aa17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 CT45A5P0DMU8 189 aa17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 CT45A7P0DMV0 189 aa17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 RELBQ01201 579 aa17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 ZNF616Q08AN1 781 aa17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 TMEM155Q4W5P6 130 aa17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 PDLIM3Q53GG5 364 aaPredicted RBP17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 VKORC1L1Q8N0U8 176 aa17.48■□□□□ 0.39
UBE2D3-216ENST00000503742 IGHV2-70P01814 119 aa17.47■□□□□ 0.39
UBE2D3-216ENST00000503742 CD5P06127 495 aa17.47■□□□□ 0.39
UBE2D3-216ENST00000503742 OR2B8PP59922 312 aa17.47■□□□□ 0.39
UBE2D3-216ENST00000503742 DEFA5Q01523 94 aa17.47■□□□□ 0.39
UBE2D3-216ENST00000503742 C4orf17Q53FE4 359 aa17.47■□□□□ 0.39
UBE2D3-216ENST00000503742 ZNF833PQ6ZTB9 187 aa17.47■□□□□ 0.39
UBE2D3-216ENST00000503742 COMMD1Q8N668 190 aa17.47■□□□□ 0.39
UBE2D3-216ENST00000503742 OR52E5Q8NH55 327 aa17.47■□□□□ 0.39
UBE2D3-216ENST00000503742 ZNF596Q8TC21 504 aa17.47■□□□□ 0.39
UBE2D3-216ENST00000503742 PARD6GQ9BYG4 376 aaPredicted RBP17.47■□□□□ 0.39
UBE2D3-216ENST00000503742 TMEM140Q9NV12 185 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms