RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 TINAGQ9UJW2 476 aa4.05□□□□□ -1.76
NDFIP1-202ENST00000503388 ZFP30Q9Y2G7 519 aa4.05□□□□□ -1.76
NDFIP1-202ENST00000503388 AUP1Q9Y679 476 aa4.05□□□□□ -1.76
NDFIP1-202ENST00000503388 SPAG17Q6Q759 2223 aa4.05□□□□□ -1.76
NDFIP1-202ENST00000503388 SCN2AQ99250 2005 aa4.05□□□□□ -1.76
NDFIP1-202ENST00000503388 CACNA1CQ13936 2221 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 MARCH11A6NNE9 402 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 ZNF253O75346 499 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 AMY1AP04745 511 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 ZNF735P0CB33 412 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 S100A4P26447 101 aaKnown RBP4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 COL8A1P27658 744 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 BTCP35070 178 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 DCAF12L2Q5VW00 463 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 SSX7Q7RTT5 188 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 TMEM144Q7Z5S9 345 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 SFTPA1Q8IWL2 248 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 TEX45Q8NA69 505 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 DEFB124Q8NES8 71 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 DEFB108BQ8NET1 73 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 OR4X1Q8NH49 305 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 SNRNP40Q96DI7 357 aaKnown RBP4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 FBXO17Q96EF6 278 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 AGMATQ9BSE5 352 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 TCF19Q9Y242 345 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 RNF115Q9Y4L5 304 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 PLXNB3Q9ULL4 1909 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 A0A1W2PRE2 83 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 ZNF716A6NP11 495 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 H3BP45 60 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 ERVH48-1M5A8F1 160 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 PAGE4O60829 102 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 RHBDL1O75783 438 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 APCSP02743 223 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 FTH1P19P0C7X4 201 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 TSPOP30536 169 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 APOBEC3AP31941 199 aaPredicted RBP4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 AMTP48728 403 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 KRTDAPP60985 99 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 PEAR1Q5VY43 1037 aaPredicted RBP4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 PVRIGQ6DKI7 326 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 ATP5L2Q7Z4Y8 100 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 SFTPA2Q8IWL1 248 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 MTURNQ8N3F0 131 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 C5orf17Q8NAS9 161 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 FAM57AQ8TBR7 257 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 TMEM171Q8WVE6 324 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 CLEC7AQ9BXN2 247 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 TRGC1P0CF51 173 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 CMC4P56277 68 aaPredicted RBP4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 SLC35B1P78383 322 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 SPEM2Q0P670 501 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 COL5A1-AS1Q5SY13 56 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 VASH2Q86V25 355 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 GBGT1Q8N5D6 347 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 OR4P4Q8NGL7 312 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 OR1P1Q8NH06 330 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 OR4C12Q96R67 309 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 TIMP4Q99727 224 aa4.04□□□□□ -1.76
NDFIP1-202ENST00000503388 TRBV24-1A0A075B6N3 115 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 OR2W5A6NFC9 320 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 F2RL2O00254 374 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 ZNF207O43670 478 aaKnown RBP4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 LTBRP36941 435 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 DSCR9P59020 149 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 LSM11P83369 360 aaKnown RBP eCLIP4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 TNXAQ16473 311 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 OR2B11Q5JQS5 317 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 SPATA46Q5T0L3 261 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 LAMTOR1Q6IAA8 161 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 ZNF497Q6ZNH5 498 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 TCF24Q7RTU0 167 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 TMEM183AQ8IXX5 376 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 DRAM1Q8N682 238 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 SYT8Q8NBV8 401 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 UBALD1Q8TB05 177 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 MISP3Q96FF7 219 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 MEGF10Q96KG7 1140 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 WFIKKN1Q96NZ8 548 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 RTBDNQ9BSG5 229 aaPredicted RBP4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 OSTCQ9NRP0 149 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 TMEM140Q9NV12 185 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 FUT9Q9Y231 359 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 KBTBD11-OT1A0A1B0GTJ5 212 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 SH2D7A6NKC9 451 aaPredicted RBP4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 PPIHO43447 177 aaKnown RBP4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 ZG16O60844 167 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 RBP4P02753 201 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 FABP4P15090 132 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 ZNF250P15622 560 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 CLDN18P56856 261 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 ZP1P60852 638 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 KLRB1Q12918 225 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 ZNF385CQ66K41 422 aaPredicted RBP4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 CLEC9AQ6UXN8 241 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 FMC1Q96HJ9 113 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 UQCR10Q9UDW1 63 aa4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 RALYQ9UKM9 306 aaKnown RBP4.03□□□□□ -1.76
NDFIP1-202ENST00000503388 RPH3ALQ9UNE2 315 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms