RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 NDUFS8O00217 210 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 CREBL2O60519 120 aaPredicted RBP0.33□□□□□ -2.36
SMAD1-203ENST00000502342 NPPAP01160 153 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 EVX1P49640 407 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 DLX6P56179 175 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 RAB8AP61006 207 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 TMEM267Q0VDI3 215 aaPredicted RBP0.33□□□□□ -2.36
SMAD1-203ENST00000502342 OR4D1Q15615 310 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 Q1T7F1 81 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 SPATA31B1PQ5VZV4 182 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 FAM173BQ6P4H8 233 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 C1orf174Q8IYL3 243 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 CNPY4Q8N129 248 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 DYNAPQ8N1N2 210 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 ZNF675Q8TD23 568 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 Q8WTZ3 238 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 SMIM12Q96EX1 92 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 MSANTD3Q96H12 275 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 SFRP2Q96HF1 295 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 IMMP2LQ96T52 175 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 HBEGFQ99075 208 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 GNB1LQ9BYB4 327 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 EMC3Q9P0I2 261 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 NUP153P49790 1475 aaKnown RBP0.33□□□□□ -2.36
SMAD1-203ENST00000502342 LAMB4A4D0S4 1761 aa0.32□□□□□ -2.36
SMAD1-203ENST00000502342 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.32□□□□□ -2.36
SMAD1-203ENST00000502342 TRAV38-1A0A0B4J264 116 aa0.32□□□□□ -2.36
SMAD1-203ENST00000502342 A0A0D9SEW6 157 aa0.32□□□□□ -2.36
SMAD1-203ENST00000502342 H7C2G1 150 aa0.32□□□□□ -2.36
SMAD1-203ENST00000502342 M0R381 172 aa0.32□□□□□ -2.36
SMAD1-203ENST00000502342 GEMIN2O14893 280 aaKnown RBP0.32□□□□□ -2.36
SMAD1-203ENST00000502342 MPZL2O60487 215 aa0.32□□□□□ -2.36
SMAD1-203ENST00000502342 LGALS1P09382 135 aaKnown RBP0.32□□□□□ -2.36
SMAD1-203ENST00000502342 DEFA4P12838 97 aa0.32□□□□□ -2.36
SMAD1-203ENST00000502342 CCL2P13500 99 aa0.32□□□□□ -2.36
SMAD1-203ENST00000502342 TMEM33P57088 247 aa0.32□□□□□ -2.36
SMAD1-203ENST00000502342 FXYD7P58549 80 aa0.32□□□□□ -2.36
SMAD1-203ENST00000502342 TAS2R20P59543 309 aa0.32□□□□□ -2.36
SMAD1-203ENST00000502342 TBPL1P62380 186 aa0.32□□□□□ -2.36
SMAD1-203ENST00000502342 HIST1H4AP62805 103 aaKnown RBP0.32□□□□□ -2.36
SMAD1-203ENST00000502342 MIAQ16674 131 aa0.32□□□□□ -2.36
SMAD1-203ENST00000502342 C9orf64Q5T6V5 341 aa0.32□□□□□ -2.36
SMAD1-203ENST00000502342 LCN8Q6JVE9 175 aa0.32□□□□□ -2.36
SMAD1-203ENST00000502342 ATP6V1C2Q8NEY4 427 aa0.32□□□□□ -2.36
SMAD1-203ENST00000502342 DYNC2LI1Q8TCX1 351 aa0.32□□□□□ -2.36
SMAD1-203ENST00000502342 CPNE2Q96FN4 548 aaPredicted RBP0.32□□□□□ -2.36
SMAD1-203ENST00000502342 SNURFQ9Y675 71 aa0.32□□□□□ -2.36
SMAD1-203ENST00000502342 MUC5BQ9HC84 5762 aaPredicted RBP0.31□□□□□ -2.36
SMAD1-203ENST00000502342 THSD7AQ9UPZ6 1657 aa0.31□□□□□ -2.36
SMAD1-203ENST00000502342 TRAV7A0A075B6U4 112 aa0.31□□□□□ -2.36
SMAD1-203ENST00000502342 A0A087WUU8 490 aa0.31□□□□□ -2.36
SMAD1-203ENST00000502342 A0A0J9YW62 118 aa0.31□□□□□ -2.36
SMAD1-203ENST00000502342 H3BT86 120 aa0.31□□□□□ -2.36
SMAD1-203ENST00000502342 PPBPP02775 128 aa0.31□□□□□ -2.36
SMAD1-203ENST00000502342 TRGC1P0CF51 173 aa0.31□□□□□ -2.36
SMAD1-203ENST00000502342 H2BFSP57053 126 aa0.31□□□□□ -2.36
SMAD1-203ENST00000502342 CDK10Q15131 360 aa0.31□□□□□ -2.36
SMAD1-203ENST00000502342 PLPPR5Q32ZL2 321 aa0.31□□□□□ -2.36
SMAD1-203ENST00000502342 DCXRQ7Z4W1 244 aa0.31□□□□□ -2.36
SMAD1-203ENST00000502342 RORBQ92753 470 aa0.31□□□□□ -2.36
SMAD1-203ENST00000502342 RNASE6Q93091 150 aaKnown RBP0.31□□□□□ -2.36
SMAD1-203ENST00000502342 MS4A6EQ96DS6 147 aa0.31□□□□□ -2.36
SMAD1-203ENST00000502342 CYTH2Q99418 400 aa0.31□□□□□ -2.36
SMAD1-203ENST00000502342 REG4Q9BYZ8 158 aa0.31□□□□□ -2.36
SMAD1-203ENST00000502342 METTL9Q9H1A3 318 aa0.31□□□□□ -2.36
SMAD1-203ENST00000502342 POFUT2Q9Y2G5 429 aa0.31□□□□□ -2.36
SMAD1-203ENST00000502342 HDGFL3Q9Y3E1 203 aa0.31□□□□□ -2.36
SMAD1-203ENST00000502342 NUP160Q12769 1436 aa0.3□□□□□ -2.36
SMAD1-203ENST00000502342 DAPL1A0PJW8 107 aa0.3□□□□□ -2.36
SMAD1-203ENST00000502342 MEIS3P1A6NDR6 274 aa0.3□□□□□ -2.36
SMAD1-203ENST00000502342 SYNGR1O43759 233 aa0.3□□□□□ -2.36
SMAD1-203ENST00000502342 FADS2O95864 444 aaKnown RBP0.3□□□□□ -2.36
SMAD1-203ENST00000502342 APOA1P02647 267 aa0.3□□□□□ -2.36
SMAD1-203ENST00000502342 LINC00614P0C842 121 aa0.3□□□□□ -2.36
SMAD1-203ENST00000502342 SLC35E2BP0CK96 405 aa0.3□□□□□ -2.36
SMAD1-203ENST00000502342 F8A1P23610 371 aa0.3□□□□□ -2.36
SMAD1-203ENST00000502342 LCN1P31025 176 aa0.3□□□□□ -2.36
SMAD1-203ENST00000502342 RPL28P46779 137 aaKnown RBP0.3□□□□□ -2.36
SMAD1-203ENST00000502342 ETV1P50549 477 aa0.3□□□□□ -2.36
SMAD1-203ENST00000502342 SMAGPQ0VAQ4 97 aa0.3□□□□□ -2.36
SMAD1-203ENST00000502342 GNA13Q14344 377 aa0.3□□□□□ -2.36
SMAD1-203ENST00000502342 USF2Q15853 346 aaPredicted RBP0.3□□□□□ -2.36
SMAD1-203ENST00000502342 RBM48Q5RL73 367 aaKnown RBP0.3□□□□□ -2.36
SMAD1-203ENST00000502342 FAM19A2Q8N3H0 131 aa0.3□□□□□ -2.36
SMAD1-203ENST00000502342 SLC22A24Q8N4F4 322 aa0.3□□□□□ -2.36
SMAD1-203ENST00000502342 RNASEH2CQ8TDP1 164 aaKnown RBP0.3□□□□□ -2.36
SMAD1-203ENST00000502342 MRPL57Q9BQC6 102 aaKnown RBP0.3□□□□□ -2.36
SMAD1-203ENST00000502342 MED10Q9BTT4 135 aa0.3□□□□□ -2.36
SMAD1-203ENST00000502342 ASCL3Q9NQ33 180 aa0.3□□□□□ -2.36
SMAD1-203ENST00000502342 PARVAQ9NVD7 372 aa0.3□□□□□ -2.36
SMAD1-203ENST00000502342 ZNHIT6Q9NWK9 470 aaKnown RBP0.3□□□□□ -2.36
SMAD1-203ENST00000502342 RBM7Q9Y580 266 aaKnown RBP0.3□□□□□ -2.36
SMAD1-203ENST00000502342 MAP3K19Q56UN5 1328 aa0.3□□□□□ -2.36
SMAD1-203ENST00000502342 SCAF11Q99590 1463 aaKnown RBP0.29□□□□□ -2.36
SMAD1-203ENST00000502342 SIPA1L1O43166 1804 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 GLI3P10071 1580 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 PTPRSQ13332 1948 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 DICER1Q9UPY3 1922 aaKnown RBP0.29□□□□□ -2.36
SMAD1-203ENST00000502342 OR6C6A6NF89 314 aa0.29□□□□□ -2.36
SMAD1-203ENST00000502342 METTL15A6NJ78 407 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms