RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 TRAV24A0A0B4J272 114 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 DEGS1O15121 323 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 SOX15O60248 233 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 VENTXO95231 258 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 MT-CO3P00414 261 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 IFNA5P01569 189 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 IGHEP01854 428 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 LCATP04180 440 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 PGA5P0DJD9 388 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 SSR4P51571 173 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 SPCS3P61009 180 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 RPL23P62829 140 aaKnown RBP3.27□□□□□ -1.89
CLTC-209ENST00000498711 RUNX1Q01196 453 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 HNF4GQ14541 408 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 SSX2Q16385 188 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 PDLIM3Q53GG5 364 aaPredicted RBP3.27□□□□□ -1.89
CLTC-209ENST00000498711 DMRTC1Q5HYR2 192 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 TMEM144Q7Z5S9 345 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 Q8N7P7 452 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 TMEM68Q96MH6 324 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 NDUFAF3Q9BU61 184 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 MAGT1Q9H0U3 335 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 ELL3Q9HB65 397 aaPredicted RBP3.27□□□□□ -1.89
CLTC-209ENST00000498711 PCSK5Q92824 1860 aa3.27□□□□□ -1.89
CLTC-209ENST00000498711 IGHV3-15A0A0B4J1V0 119 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 SYNGR2O43760 224 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 YPEL1O60688 119 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 IGKV1D-33P01593 117 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 IGKV1-33P01594 117 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 SFTPCP11686 197 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 FGF7P21781 194 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 CCKARP32238 428 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 GNB2P62879 340 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 LCN2P80188 198 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 COL10A1Q03692 680 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 TMEM241Q24JQ0 296 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 PLCXD3Q63HM9 321 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 ZNF474Q6S9Z5 364 aaPredicted RBP3.26□□□□□ -1.89
CLTC-209ENST00000498711 MEX3BQ6ZN04 569 aaKnown RBP3.26□□□□□ -1.89
CLTC-209ENST00000498711 RBPMS2Q6ZRY4 209 aaKnown RBP3.26□□□□□ -1.89
CLTC-209ENST00000498711 MOB1BQ7L9L4 216 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 AAED1Q7RTV5 226 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 ZNF664Q8N3J9 261 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 OR10V1Q8NGI7 309 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 FAM216AQ8WUB2 273 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 YPEL2Q96QA6 119 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 OR51I2Q9H344 312 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 CRLF2Q9HC73 371 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 SPTBP11277 2137 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 SMCO3A2RU48 225 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 G3V3Y1 287 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 CST7O76096 145 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 IFNA1P01562 189 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 CELA2AP08217 269 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 CARD18P57730 90 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 YPEL3P61236 119 aaPredicted RBP3.26□□□□□ -1.89
CLTC-209ENST00000498711 PAX5Q02548 391 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 CEACAM16Q2WEN9 425 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 KRTCAP3Q53RY4 240 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 ZNF497Q6ZNH5 498 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 C16orf82Q7Z2V1 217 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 STX12Q86Y82 276 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 RPP25LQ8N5L8 163 aaKnown RBP3.26□□□□□ -1.89
CLTC-209ENST00000498711 TCTEX1D1Q8N7M0 179 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 DEFB124Q8NES8 71 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 PIGCQ92535 297 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 TAF15Q92804 592 aaKnown RBP eCLIP3.26□□□□□ -1.89
CLTC-209ENST00000498711 RAB1CQ92928 201 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 POM121L2Q96KW2 1035 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 Q96MF0 132 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 JSRP1Q96MG2 331 aaPredicted RBP3.26□□□□□ -1.89
CLTC-209ENST00000498711 OR4C12Q96R67 309 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 ZPBPQ9BS86 351 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 ZNF442Q9H7R0 627 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 ZNF665Q9H7R5 613 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 AKIRIN1Q9H9L7 192 aaPredicted RBP3.26□□□□□ -1.89
CLTC-209ENST00000498711 MANBALQ9NQG1 85 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 PSENENQ9NZ42 101 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 OR6C3Q9NZP0 311 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 MPC1Q9Y5U8 109 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 NCOA6Q14686 2063 aaPredicted RBP3.26□□□□□ -1.89
CLTC-209ENST00000498711 DCHS1Q96JQ0 3298 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 TRAV9-1A0A075B6T8 112 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 KIR2DL5BA0A0G2JN68 375 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 KIR2DL5BA0A0G2JPC4 375 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 CTXND1A0A1B0GTU2 59 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 A0A1B0GV90 55 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 OR5B21A6NL26 309 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 ZNF737O75373 536 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 MBP02144 154 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 EGR2P11161 476 aaPredicted RBP3.26□□□□□ -1.89
CLTC-209ENST00000498711 PSG2P11465 335 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 NPPCP23582 126 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 NUTF2P61970 127 aaKnown RBP3.26□□□□□ -1.89
CLTC-209ENST00000498711 SELENOTP62341 195 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 PRAMEF20Q5VT98 475 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 GUSBP11Q6P575 273 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 ZDHHC23Q8IYP9 409 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 KIR2DL5AQ8N109 375 aa3.26□□□□□ -1.89
CLTC-209ENST00000498711 TMEM217Q8N7C4 229 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms