RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 OR10G9Q8NGN4 311 aa13.74□□□□□ -0.21
COL6A1-206ENST00000498614 OR10G7Q8NGN6 311 aa13.74□□□□□ -0.21
COL6A1-206ENST00000498614 WFIKKN1Q96NZ8 548 aa13.74□□□□□ -0.21
COL6A1-206ENST00000498614 ZDHHC11Q9H8X9 412 aa13.74□□□□□ -0.21
COL6A1-206ENST00000498614 WASF3Q9UPY6 502 aa13.74□□□□□ -0.21
COL6A1-206ENST00000498614 GGCTO75223 188 aaKnown RBP13.73□□□□□ -0.21
COL6A1-206ENST00000498614 TMEM178AQ8NBL3 297 aa13.73□□□□□ -0.21
COL6A1-206ENST00000498614 OR5T1Q8NG75 326 aa13.73□□□□□ -0.21
COL6A1-206ENST00000498614 SLC25A40Q8TBP6 338 aa13.73□□□□□ -0.21
COL6A1-206ENST00000498614 OR6C3Q9NZP0 311 aa13.73□□□□□ -0.21
COL6A1-206ENST00000498614 TCAPO15273 167 aa13.73□□□□□ -0.21
COL6A1-206ENST00000498614 KLK10O43240 276 aa13.73□□□□□ -0.21
COL6A1-206ENST00000498614 PAGE4O60829 102 aa13.73□□□□□ -0.21
COL6A1-206ENST00000498614 NXPH2O95156 264 aa13.73□□□□□ -0.21
COL6A1-206ENST00000498614 GRPP07492 148 aa13.73□□□□□ -0.21
COL6A1-206ENST00000498614 DEFA4P12838 97 aa13.73□□□□□ -0.21
COL6A1-206ENST00000498614 CEBPDP49716 269 aaPredicted RBP13.73□□□□□ -0.21
COL6A1-206ENST00000498614 FFAR4Q5NUL3 377 aa13.73□□□□□ -0.21
COL6A1-206ENST00000498614 ZNF497Q6ZNH5 498 aa13.73□□□□□ -0.21
COL6A1-206ENST00000498614 GMPPAQ96IJ6 420 aaPredicted RBP13.73□□□□□ -0.21
COL6A1-206ENST00000498614 NEU1Q99519 415 aa13.73□□□□□ -0.21
COL6A1-206ENST00000498614 CLN8Q9UBY8 286 aa13.73□□□□□ -0.21
COL6A1-206ENST00000498614 RAMP3O60896 148 aa13.72□□□□□ -0.21
COL6A1-206ENST00000498614 WISP2O76076 250 aa13.72□□□□□ -0.21
COL6A1-206ENST00000498614 TFF3Q07654 80 aa13.72□□□□□ -0.21
COL6A1-206ENST00000498614 MRPL49Q13405 166 aaKnown RBP13.72□□□□□ -0.21
COL6A1-206ENST00000498614 MRPL41Q8IXM3 137 aaKnown RBP13.72□□□□□ -0.21
COL6A1-206ENST00000498614 TMEM18Q96B42 140 aa13.72□□□□□ -0.21
COL6A1-206ENST00000498614 ANAPC16Q96DE5 110 aa13.72□□□□□ -0.21
COL6A1-206ENST00000498614 IGF2RP11717 2491 aa13.72□□□□□ -0.21
COL6A1-206ENST00000498614 C1QTNF9BB2RNN3 333 aa13.72□□□□□ -0.21
COL6A1-206ENST00000498614 FAM90A26D6RGX4 464 aa13.72□□□□□ -0.21
COL6A1-206ENST00000498614 NPPCP23582 126 aa13.72□□□□□ -0.21
COL6A1-206ENST00000498614 CHRNA7P36544 502 aa13.72□□□□□ -0.21
COL6A1-206ENST00000498614 ERVK11-1P61568 191 aa13.72□□□□□ -0.21
COL6A1-206ENST00000498614 HOXA4Q00056 320 aaPredicted RBP13.72□□□□□ -0.21
COL6A1-206ENST00000498614 MANBALQ9NQG1 85 aa13.72□□□□□ -0.21
COL6A1-206ENST00000498614 POLDIP2Q9Y2S7 368 aa13.72□□□□□ -0.21
COL6A1-206ENST00000498614 TYMSP04818 313 aa13.71□□□□□ -0.21
COL6A1-206ENST00000498614 TNFSF10P50591 281 aa13.71□□□□□ -0.21
COL6A1-206ENST00000498614 SOX8P57073 446 aa13.71□□□□□ -0.21
COL6A1-206ENST00000498614 NUTF2P61970 127 aaKnown RBP13.71□□□□□ -0.21
COL6A1-206ENST00000498614 PAX5Q02548 391 aa13.71□□□□□ -0.21
COL6A1-206ENST00000498614 ACOT6Q3I5F7 207 aaPredicted RBP13.71□□□□□ -0.21
COL6A1-206ENST00000498614 CXorf67Q86X51 503 aaPredicted RBP13.71□□□□□ -0.21
COL6A1-206ENST00000498614 NEIL1Q96FI4 390 aaPredicted RBP13.71□□□□□ -0.21
COL6A1-206ENST00000498614 TRIB1Q96RU8 372 aa13.71□□□□□ -0.21
COL6A1-206ENST00000498614 ATG101Q9BSB4 218 aa13.71□□□□□ -0.21
COL6A1-206ENST00000498614 TMEM147Q9BVK8 224 aa13.71□□□□□ -0.21
COL6A1-206ENST00000498614 HSPB7Q9UBY9 170 aa13.71□□□□□ -0.21
COL6A1-206ENST00000498614 BSNQ9UPA5 3926 aa13.71□□□□□ -0.21
COL6A1-206ENST00000498614 KRASP01116 189 aa13.71□□□□□ -0.22
COL6A1-206ENST00000498614 G6PCP35575 357 aa13.71□□□□□ -0.22
COL6A1-206ENST00000498614 SRP14P37108 136 aaKnown RBP13.71□□□□□ -0.22
COL6A1-206ENST00000498614 PSG7Q13046 419 aa13.71□□□□□ -0.22
COL6A1-206ENST00000498614 MOB1BQ7L9L4 216 aa13.71□□□□□ -0.22
COL6A1-206ENST00000498614 Q8IYB0 196 aa13.71□□□□□ -0.22
COL6A1-206ENST00000498614 CISD2Q8N5K1 135 aaKnown RBP13.71□□□□□ -0.22
COL6A1-206ENST00000498614 MRPL37Q9BZE1 423 aaKnown RBP13.71□□□□□ -0.22
COL6A1-206ENST00000498614 PMS2P5A8MQ11 134 aa13.7□□□□□ -0.22
COL6A1-206ENST00000498614 MPV17P39210 176 aa13.7□□□□□ -0.22
COL6A1-206ENST00000498614 CCL11P51671 97 aa13.7□□□□□ -0.22
COL6A1-206ENST00000498614 TGFBR3Q03167 851 aa13.7□□□□□ -0.22
COL6A1-206ENST00000498614 TEX38Q6PEX7 206 aa13.7□□□□□ -0.22
COL6A1-206ENST00000498614 GBGT1Q8N5D6 347 aa13.7□□□□□ -0.22
COL6A1-206ENST00000498614 AURKAIP1Q9NWT8 199 aaPredicted RBP13.7□□□□□ -0.22
COL6A1-206ENST00000498614 CHD8Q9HCK8 2581 aa13.7□□□□□ -0.22
COL6A1-206ENST00000498614 GTF3C1Q12789 2109 aa13.7□□□□□ -0.22
COL6A1-206ENST00000498614 SH2D1BO14796 132 aa13.69□□□□□ -0.22
COL6A1-206ENST00000498614 AGFG2O95081 481 aa13.69□□□□□ -0.22
COL6A1-206ENST00000498614 EGR1P18146 543 aa13.69□□□□□ -0.22
COL6A1-206ENST00000498614 IL3RAP26951 378 aa13.69□□□□□ -0.22
COL6A1-206ENST00000498614 CCKARP32238 428 aa13.69□□□□□ -0.22
COL6A1-206ENST00000498614 ZNF816Q0VGE8 651 aaPredicted RBP13.69□□□□□ -0.22
COL6A1-206ENST00000498614 FAM78BQ5VT40 261 aa13.69□□□□□ -0.22
COL6A1-206ENST00000498614 FAM53AQ6NSI3 398 aaPredicted RBP13.69□□□□□ -0.22
COL6A1-206ENST00000498614 CNEP1R1Q8N9A8 125 aa13.69□□□□□ -0.22
COL6A1-206ENST00000498614 A0A1B0GUS0 222 aa13.69□□□□□ -0.22
COL6A1-206ENST00000498614 J3QW42 95 aa13.69□□□□□ -0.22
COL6A1-206ENST00000498614 MBP02144 154 aa13.69□□□□□ -0.22
COL6A1-206ENST00000498614 CNN1P51911 297 aaKnown RBP13.69□□□□□ -0.22
COL6A1-206ENST00000498614 RPL30P62888 115 aaKnown RBP13.69□□□□□ -0.22
COL6A1-206ENST00000498614 GABRA6Q16445 453 aa13.69□□□□□ -0.22
COL6A1-206ENST00000498614 DEFB109BQ30KR1 87 aa13.69□□□□□ -0.22
COL6A1-206ENST00000498614 OR1L1Q8NH94 360 aa13.69□□□□□ -0.22
COL6A1-206ENST00000498614 C5orf30Q96GV9 206 aa13.69□□□□□ -0.22
COL6A1-206ENST00000498614 SNHG12Q9BXW3 62 aa13.69□□□□□ -0.22
COL6A1-206ENST00000498614 OBP2BQ9NPH6 170 aa13.69□□□□□ -0.22
COL6A1-206ENST00000498614 CLCF1Q9UBD9 225 aa13.69□□□□□ -0.22
COL6A1-206ENST00000498614 ODAMA1E959 279 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 WNT9BO14905 357 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 VENTXO95231 258 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 CRYAAP02489 173 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 RAC2P15153 192 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 COX5AP20674 150 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 BMP5P22003 454 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 ZNF146Q15072 292 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 ATP6V1FQ16864 119 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 IQCJQ1A5X6 159 aa13.68□□□□□ -0.22
COL6A1-206ENST00000498614 ZNF826PQ6ZT77 177 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms