RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	YPEL1	O60688	119 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	SIX6	O95475	246 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	CD8A	P01732	235 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	RPS2	P15880	293 aa	Known RBP	4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	NDUFB7	P17568	137 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	GNRHR	P30968	328 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	SUPT4H1	P63272	117 aa	Known RBP	4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	CTAG1A	P78358	180 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	MRPS11	P82912	194 aa	Known RBP	4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	MEF2C	Q06413	473 aa	Predicted RBP	4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	TMEM187	Q14656	261 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	OPCML	Q14982	345 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	MSMO1	Q15800	293 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	PHLDA2	Q53GA4	152 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	LRRC10	Q5BKY1	277 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	FAM201A	Q5SY85	155 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	ZNF695	Q8IW36	515 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	LRTM2	Q8N967	370 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	OR10A7	Q8NGE5	316 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	OR13A1	Q8NGR1	328 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	OR1L1	Q8NH94	360 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	CORO2A	Q92828	525 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	RAB1C	Q92928	201 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	RAB39B	Q96DA2	213 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	TIMD4	Q96H15	378 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	YPEL2	Q96QA6	119 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	KRTAP2-2	Q9BYT5	123 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	NMES1	Q9C002	83 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	PLEKHF2	Q9H8W4	249 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	OR2S2	Q9NQN1	319 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	ZFP57	Q9NU63	452 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	TAS2R3	Q9NYW6	316 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	PIPOX	Q9P0Z9	390 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	OR1A1	Q9P1Q5	309 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	KAAG1	Q9UBP8	84 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	JPT1	Q9UK76	154 aa		4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	PRKDC	P78527	4128 aa	Known RBP	4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	CHD3	Q12873	2000 aa	Known RBP	4.36	□□□□□ -1.71
HMGXB4-208	ENST00000498325	IGKV1D-13	A0A0B4J2D9	117 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	KBTBD11-OT1	A0A1B0GTJ5	212 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325		A0A1W2PPH5	198 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325		A6NNC1	897 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325		A8MXK9	166 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	C15orf65	H3BRN8	121 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325		L7N2F9	121 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	F2RL2	O00254	374 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	CCS	O14618	274 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	ITGB1BP1	O14713	200 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	TNFRSF13B	O14836	293 aa	Predicted RBP	4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	PGLYRP1	O75594	196 aa	Predicted RBP	4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	ATG12	O94817	140 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	MPC2	O95563	127 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	LY86	O95711	162 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	RLN2	P04090	185 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	TFF1	P04155	84 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	HOXB5	P09067	269 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	WNT2	P09544	360 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	OR5AC1	P0C628	307 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	OR8U9	P0C7N5	309 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	IGKV1-13	P0DP09	117 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	COL8A2	P25067	703 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	F2R	P25116	425 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	PSMB6	P28072	239 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	RAB7A	P51149	207 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	H2BFS	P57053	126 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	TMEM33	P57088	247 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	S100A12	P80511	92 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	HOXA4	Q00056	320 aa	Predicted RBP	4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	FLI1	Q01543	452 aa	Predicted RBP	4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	CATR1	Q13166	79 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	ZNF273	Q14593	569 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	C2orf68	Q2NKX9	166 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325		Q5PR19	223 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	LY6G6F	Q5SQ64	297 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	PXDC1	Q5TGL8	231 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	C11orf71	Q6IPW1	123 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	ZNF818P	Q6ZRF7	136 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	C5orf24	Q7Z6I8	188 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	TBC1D26	Q86UD7	250 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	DTX2	Q86UW9	622 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	STPG2	Q8N412	459 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	ZNF645	Q8N7E2	425 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	TCTEX1D1	Q8N7M0	179 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	TPRX1	Q8N7U7	411 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	OR11H4	Q8NGC9	324 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	OR52L2P	Q8NGH6	319 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	OR52M1	Q8NGK5	317 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	OR8U1	Q8NH10	309 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	RFESD	Q8TAC1	157 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	THAP6	Q8TBB0	222 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	GLYATL2	Q8WU03	294 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	IL22RA2	Q969J5	263 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	SEC22A	Q96IW7	307 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	C2orf50	Q96LR7	162 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	SPIN2A	Q99865	258 aa		4.35	□□□□□ -1.71
HMGXB4-208	ENST00000498325	SPIN2B	Q9BPZ2	258 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms