RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 NOTOA8MTQ0 251 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 PRSS46E5RG02 174 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 OR6A2O95222 327 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 ZNF688P0C7X2 276 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 RNASE3P12724 160 aaKnown RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 COX4I1P13073 169 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 ACP5P13686 325 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 TPT1P13693 172 aaKnown RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 UCHL3P15374 230 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 HOXC8P31273 242 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 VGLL4Q14135 290 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 ODF1Q14990 250 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 SS18Q15532 418 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 TRAT1Q6PIZ9 186 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 H1FOOQ8IZA3 346 aaPredicted RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 OR2I1PQ8NGU4 316 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 PHLDA1Q8WV24 401 aaPredicted RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 MRGPRFQ96AM1 343 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 TMEM18Q96B42 140 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 BIRC7Q96CA5 298 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 KLF6Q99612 283 aaPredicted RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 TMEM243Q9BU79 118 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 C19orf24Q9BVV8 132 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 OR11A1Q9GZK7 315 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 IL22Q9GZX6 179 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 SDCBP2Q9H190 292 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 NMRK1Q9NWW6 199 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 COMMD8Q9NX08 183 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 SCN3BQ9NY72 215 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 RNF24Q9Y225 148 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 NDUFAF1Q9Y375 327 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 F11RQ9Y624 299 aaKnown RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 TENM1Q9UKZ4 2725 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 IGHV1-45A0A0A0MS14 117 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 EFCAB8A8MWE9 144 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 MIF4GDA9UHW6 222 aaKnown RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 MRASO14807 208 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 SSX5O60225 188 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 LYPLA1O75608 230 aaPredicted RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 SLC25A5P05141 298 aaKnown RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 SOD3P08294 240 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 HOXC4P09017 264 aaPredicted RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 OR5AC1P0C628 307 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 OR52Z1P0C646 297 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 GCSHP23434 173 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 GADD45AP24522 165 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 CASP4P49662 377 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 ANXA11P50995 505 aaKnown RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 FKBP1AP62942 108 aaKnown RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 MRPS25P82663 173 aaKnown RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 PMP22Q01453 160 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 EBI3Q14213 229 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 TRAM1Q15629 374 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 H1FX-AS1Q4G0G2 97 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 Q6YL49 198 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 CERS6Q6ZMG9 384 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 SMIM5Q71RC9 77 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 ZNF525Q8N782 197 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 NECAP1Q8NC96 275 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 TMEM35BQ8NCS4 154 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 OR7D4Q8NG98 312 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 OR1K1Q8NGR3 316 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 OR9A1PQ8NGU1 263 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 FAM216AQ8WUB2 273 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 ITLN1Q8WWA0 313 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 GGHQ92820 318 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 QKIQ96PU8 341 aaKnown RBP eCLIP1.12□□□□□ -2.232e-6■■■■□ 21.7
XRN1-214ENST00000498077 ACCSQ96QU6 501 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 METTL26Q96S19 204 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 SMIM7Q9BQ49 75 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 ABHD6Q9BV23 337 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 RNF122Q9H9V4 155 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 GIMAP2Q9UG22 337 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 SIPA1L3O60292 1781 aaPredicted RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 A6NLC8 198 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 A8MUA0 341 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 H7C2Y5 167 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 M0QZ92 97 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 PLPP3O14495 311 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 NARSO43776 548 aaKnown RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 TRAPPC6AO75865 159 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 APOA2P02652 100 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 PFN1P07737 140 aaKnown RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 LAMP1P11279 417 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 ADRB3P13945 408 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 HTN3P15516 51 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 HLA-DMBP28068 263 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 GNRHRP30968 328 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 FAUP35544 74 aaKnown RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 PNPLA4P41247 253 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 PRLHP81277 87 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 SSBP2P81877 361 aaPredicted RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 PAX5Q02548 391 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 APOFQ13790 326 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 ORMDL2Q53FV1 153 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 RBM48Q5RL73 367 aaKnown RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 OR4A47Q6IF82 309 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 IDO2Q6ZQW0 420 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 THAP8Q8NA92 274 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 OR14C36Q8NHC7 312 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms