RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 INPP1P49441 399 aa12.07□□□□□ -0.48
NUP50-219ENST00000497960 TSPAN5P62079 268 aa12.07□□□□□ -0.48
NUP50-219ENST00000497960 ZNF45Q02386 682 aa12.07□□□□□ -0.48
NUP50-219ENST00000497960 VAX1Q5SQQ9 334 aa12.07□□□□□ -0.48
NUP50-219ENST00000497960 STEAP1BQ6NZ63 245 aa12.07□□□□□ -0.48
NUP50-219ENST00000497960 LYSMD2Q8IV50 215 aa12.07□□□□□ -0.48
NUP50-219ENST00000497960 ZNF645Q8N7E2 425 aa12.07□□□□□ -0.48
NUP50-219ENST00000497960 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.07□□□□□ -0.48
NUP50-219ENST00000497960 SECTM1Q8WVN6 248 aa12.07□□□□□ -0.48
NUP50-219ENST00000497960 TRIM63Q969Q1 353 aa12.07□□□□□ -0.48
NUP50-219ENST00000497960 RBMXL1Q96E39 390 aaKnown RBP12.07□□□□□ -0.48
NUP50-219ENST00000497960 AGMATQ9BSE5 352 aa12.07□□□□□ -0.48
NUP50-219ENST00000497960 KIAA1456Q9P272 454 aa12.07□□□□□ -0.48
NUP50-219ENST00000497960 RBMX2Q9Y388 322 aaKnown RBP12.07□□□□□ -0.48
NUP50-219ENST00000497960 IGKV1D-13A0A0B4J2D9 117 aa12.06□□□□□ -0.48
NUP50-219ENST00000497960 M0R1X1 148 aa12.06□□□□□ -0.48
NUP50-219ENST00000497960 NBR2O15453 112 aa12.06□□□□□ -0.48
NUP50-219ENST00000497960 RAB3DO95716 219 aa12.06□□□□□ -0.48
NUP50-219ENST00000497960 AKAIN1P0CW23 69 aa12.06□□□□□ -0.48
NUP50-219ENST00000497960 IGKV1-13P0DP09 117 aa12.06□□□□□ -0.48
NUP50-219ENST00000497960 VDAC1P21796 283 aa12.06□□□□□ -0.48
NUP50-219ENST00000497960 SLC6A1P30531 599 aa12.06□□□□□ -0.48
NUP50-219ENST00000497960 CXorf66Q5JRM2 361 aaPredicted RBP12.06□□□□□ -0.48
NUP50-219ENST00000497960 TRIQKQ629K1 86 aa12.06□□□□□ -0.48
NUP50-219ENST00000497960 LINC00299Q6ZSB3 139 aa12.06□□□□□ -0.48
NUP50-219ENST00000497960 GDPD1Q8N9F7 314 aa12.06□□□□□ -0.48
NUP50-219ENST00000497960 OR6F1Q8NGZ6 308 aa12.06□□□□□ -0.48
NUP50-219ENST00000497960 GIMAP1Q8WWP7 306 aa12.06□□□□□ -0.48
NUP50-219ENST00000497960 S100ZQ8WXG8 99 aa12.06□□□□□ -0.48
NUP50-219ENST00000497960 HSPB9Q9BQS6 159 aa12.06□□□□□ -0.48
NUP50-219ENST00000497960 THAP7Q9BT49 309 aaPredicted RBP12.06□□□□□ -0.48
NUP50-219ENST00000497960 TINAGL1Q9GZM7 467 aaPredicted RBP12.06□□□□□ -0.48
NUP50-219ENST00000497960 FXYD6Q9H0Q3 95 aa12.06□□□□□ -0.48
NUP50-219ENST00000497960 AKIP1Q9NQ31 210 aa12.06□□□□□ -0.48
NUP50-219ENST00000497960 ANKRD20A5PA0PJZ0 165 aa12.05□□□□□ -0.48
NUP50-219ENST00000497960 OR5H14A6NHG9 310 aa12.05□□□□□ -0.48
NUP50-219ENST00000497960 CD74P04233 296 aa12.05□□□□□ -0.48
NUP50-219ENST00000497960 CT45A6P0DMU7 189 aa12.05□□□□□ -0.48
NUP50-219ENST00000497960 CT45A5P0DMU8 189 aa12.05□□□□□ -0.48
NUP50-219ENST00000497960 CT45A7P0DMV0 189 aa12.05□□□□□ -0.48
NUP50-219ENST00000497960 MC5RP33032 325 aa12.05□□□□□ -0.48
NUP50-219ENST00000497960 AP3S2P59780 193 aa12.05□□□□□ -0.48
NUP50-219ENST00000497960 MEF2DQ14814 521 aa12.05□□□□□ -0.48
NUP50-219ENST00000497960 FAAP20Q6NZ36 180 aa12.05□□□□□ -0.48
NUP50-219ENST00000497960 REC114Q7Z4M0 266 aa12.05□□□□□ -0.48
NUP50-219ENST00000497960 MFSD4AQ8N468 514 aa12.05□□□□□ -0.48
NUP50-219ENST00000497960 TOMM5Q8N4H5 51 aa12.05□□□□□ -0.48
NUP50-219ENST00000497960 ARRDC1Q8N5I2 433 aa12.05□□□□□ -0.48
NUP50-219ENST00000497960 KLHL30-AS1Q8NEE0 82 aa12.05□□□□□ -0.48
NUP50-219ENST00000497960 RITA1Q96K30 269 aa12.05□□□□□ -0.48
NUP50-219ENST00000497960 SLC5A7Q9GZV3 580 aa12.05□□□□□ -0.48
NUP50-219ENST00000497960 SDHAF2Q9NX18 166 aa12.05□□□□□ -0.48
NUP50-219ENST00000497960 DISC1C4P0D8 188 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 H7C2Y5 167 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 SLC22A5O76082 557 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 HLA-DRB1P01911 266 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 IGF1P05019 195 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 ELANEP08246 267 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 IGLL1P15814 213 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 CNTFRP26992 372 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 FAUP35544 74 aaKnown RBP12.04□□□□□ -0.48
NUP50-219ENST00000497960 FOXE3Q13461 319 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 C5orf64Q2M2E5 130 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 SCGB2B2Q4G0G5 96 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 ZNF57Q68EA5 555 aaPredicted RBP12.04□□□□□ -0.48
NUP50-219ENST00000497960 LIN54Q6MZP7 749 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 GLDNQ6ZMI3 551 aaPredicted RBP12.04□□□□□ -0.48
NUP50-219ENST00000497960 ZNF695Q8IW36 515 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 NPBQ8NG41 125 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 OR4D10Q8NGI6 311 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 OR4C16Q8NGL9 310 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 MOB3AQ96BX8 217 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 C5orf30Q96GV9 206 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 RCC1LQ96I51 464 aaKnown RBP12.04□□□□□ -0.48
NUP50-219ENST00000497960 WDR12Q9GZL7 423 aaKnown RBP12.04□□□□□ -0.48
NUP50-219ENST00000497960 ZNF580Q9UK33 172 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 WASHC3Q9Y3C0 194 aa12.04□□□□□ -0.48
NUP50-219ENST00000497960 H0YJW9 148 aa12.03□□□□□ -0.48
NUP50-219ENST00000497960 DUS4LO95620 317 aaKnown RBP12.03□□□□□ -0.48
NUP50-219ENST00000497960 APOA2P02652 100 aa12.03□□□□□ -0.48
NUP50-219ENST00000497960 MYCNOSP40205 109 aa12.03□□□□□ -0.48
NUP50-219ENST00000497960 PPP5CP53041 499 aa12.03□□□□□ -0.48
NUP50-219ENST00000497960 ZNF660Q6AZW8 331 aaPredicted RBP12.03□□□□□ -0.48
NUP50-219ENST00000497960 C18orf65Q6ZTR6 163 aa12.03□□□□□ -0.48
NUP50-219ENST00000497960 C8orf86Q6ZUL3 223 aa12.03□□□□□ -0.48
NUP50-219ENST00000497960 DRAXINQ8NBI3 349 aaPredicted RBP12.03□□□□□ -0.48
NUP50-219ENST00000497960 OR5AN1Q8NGI8 311 aa12.03□□□□□ -0.48
NUP50-219ENST00000497960 OR51J1Q9H342 316 aa12.03□□□□□ -0.48
NUP50-219ENST00000497960 MCUBQ9NWR8 336 aa12.03□□□□□ -0.48
NUP50-219ENST00000497960 NDUFA3O95167 84 aa12.02□□□□□ -0.49
NUP50-219ENST00000497960 IGHG4P01861 327 aa12.02□□□□□ -0.49
NUP50-219ENST00000497960 PRB2P02812 416 aaPredicted RBP12.02□□□□□ -0.49
NUP50-219ENST00000497960 RPLP1P05386 114 aaKnown RBP12.02□□□□□ -0.49
NUP50-219ENST00000497960 PGAM2P15259 253 aa12.02□□□□□ -0.49
NUP50-219ENST00000497960 THBS3P49746 956 aa12.02□□□□□ -0.49
NUP50-219ENST00000497960 CBX3Q13185 183 aa12.02□□□□□ -0.49
NUP50-219ENST00000497960 KLF9Q13886 244 aaPredicted RBP12.02□□□□□ -0.49
NUP50-219ENST00000497960 ZNF846Q147U1 533 aa12.02□□□□□ -0.49
NUP50-219ENST00000497960 PLGLAQ15195 96 aa12.02□□□□□ -0.49
NUP50-219ENST00000497960 DHRS11Q6UWP2 260 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms