RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 KCTD12Q96CX2 325 aaKnown RBP12.43□□□□□ -0.42
VIM-208ENST00000497849 NICN1Q9BSH3 213 aa12.43□□□□□ -0.42
VIM-208ENST00000497849 SRD5A3Q9H8P0 318 aa12.43□□□□□ -0.42
VIM-208ENST00000497849 GHRLQ9UBU3 117 aa12.43□□□□□ -0.42
VIM-208ENST00000497849 TMEM127O75204 238 aa12.42□□□□□ -0.42
VIM-208ENST00000497849 OR3A3P47888 321 aa12.42□□□□□ -0.42
VIM-208ENST00000497849 GNMTQ14749 295 aa12.42□□□□□ -0.42
VIM-208ENST00000497849 CEMP1Q6PRD7 247 aaPredicted RBP12.42□□□□□ -0.42
VIM-208ENST00000497849 LINC00299Q6ZSB3 139 aa12.42□□□□□ -0.42
VIM-208ENST00000497849 OR4K15Q8NH41 348 aa12.42□□□□□ -0.42
VIM-208ENST00000497849 KCNG3Q8TAE7 436 aa12.42□□□□□ -0.42
VIM-208ENST00000497849 NEK7Q8TDX7 302 aa12.42□□□□□ -0.42
VIM-208ENST00000497849 ACOT12Q8WYK0 555 aa12.42□□□□□ -0.42
VIM-208ENST00000497849 Q96M66 194 aa12.42□□□□□ -0.42
VIM-208ENST00000497849 ABHD14AQ9BUJ0 271 aa12.42□□□□□ -0.42
VIM-208ENST00000497849 LPAR5Q9H1C0 372 aa12.42□□□□□ -0.42
VIM-208ENST00000497849 PEX16Q9Y5Y5 336 aa12.42□□□□□ -0.42
VIM-208ENST00000497849 ZNF785A8K8V0 405 aa12.41□□□□□ -0.42
VIM-208ENST00000497849 SOCS1O15524 211 aa12.41□□□□□ -0.42
VIM-208ENST00000497849 CD40LGP29965 261 aa12.41□□□□□ -0.42
VIM-208ENST00000497849 S100A5P33763 92 aa12.41□□□□□ -0.42
VIM-208ENST00000497849 RPS27AP62979 156 aaKnown RBP12.41□□□□□ -0.42
VIM-208ENST00000497849 SIGIRRQ6IA17 410 aa12.41□□□□□ -0.42
VIM-208ENST00000497849 C5orf24Q7Z6I8 188 aa12.41□□□□□ -0.42
VIM-208ENST00000497849 LGALS14Q8TCE9 139 aa12.41□□□□□ -0.42
VIM-208ENST00000497849 OVOL2Q9BRP0 275 aa12.41□□□□□ -0.42
VIM-208ENST00000497849 TMEM59Q9BXS4 323 aa12.41□□□□□ -0.42
VIM-208ENST00000497849 OR2S2Q9NQN1 319 aa12.41□□□□□ -0.42
VIM-208ENST00000497849 TRAPPC2LQ9UL33 140 aa12.41□□□□□ -0.42
VIM-208ENST00000497849 PKHD1P08F94 4074 aa12.41□□□□□ -0.42
VIM-208ENST00000497849 MUC4Q99102 2169 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 C13orf42A0A1B0GVH6 325 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 RGS5O15539 181 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 TRBV12-3P01733 135 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 RCC1P18754 421 aaPredicted RBP12.4□□□□□ -0.42
VIM-208ENST00000497849 DYRK1AQ13627 763 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 PLGLAQ15195 96 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 MPV17LQ2QL34 196 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 MOGAT2Q3SYC2 334 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 C6orf183Q5T699 404 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 FAM131AQ6UXB0 335 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 LINC00596Q86U02 117 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 LAX1Q8IWV1 398 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 GAPTQ8N292 157 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 OR52L2PQ8NGH6 319 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 OR2K2Q8NGT1 345 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 MRPS24Q96EL2 167 aaKnown RBP12.4□□□□□ -0.42
VIM-208ENST00000497849 CLCC1Q96S66 551 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 RAB9BQ9NP90 201 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 ABRACLQ9P1F3 81 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 COMMD3Q9UBI1 195 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 SLC23A1Q9UHI7 598 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 RAB22AQ9UL26 194 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 FAT2Q9NYQ8 4349 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 DNAH6Q9C0G6 4158 aa12.4□□□□□ -0.42
VIM-208ENST00000497849 SAA2-SAA4A0A096LPE2 208 aa12.39□□□□□ -0.43
VIM-208ENST00000497849 UBE2QL1A1L167 161 aa12.39□□□□□ -0.43
VIM-208ENST00000497849 OR11H12B2RN74 326 aa12.39□□□□□ -0.43
VIM-208ENST00000497849 CTDSP2O14595 271 aa12.39□□□□□ -0.43
VIM-208ENST00000497849 SAA2P0DJI9 122 aaPredicted RBP12.39□□□□□ -0.43
VIM-208ENST00000497849 PPP1CCP36873 323 aaKnown RBP12.39□□□□□ -0.43
VIM-208ENST00000497849 CD300EQ496F6 205 aaPredicted RBP12.39□□□□□ -0.43
VIM-208ENST00000497849 ZNF562Q6V9R5 426 aa12.39□□□□□ -0.43
VIM-208ENST00000497849 POC5Q8NA72 575 aa12.39□□□□□ -0.43
VIM-208ENST00000497849 TM2D1Q9BX74 207 aa12.39□□□□□ -0.43
VIM-208ENST00000497849 ZNF355PQ9NSJ1 428 aa12.39□□□□□ -0.43
VIM-208ENST00000497849 SLC2A8Q9NY64 477 aa12.39□□□□□ -0.43
VIM-208ENST00000497849 RCC2Q9P258 522 aaKnown RBP12.39□□□□□ -0.43
VIM-208ENST00000497849 DYNC1H1Q14204 4646 aaKnown RBP12.39□□□□□ -0.43
VIM-208ENST00000497849 DNAH2Q9P225 4427 aa12.38□□□□□ -0.43
VIM-208ENST00000497849 CA2P00918 260 aa12.38□□□□□ -0.43
VIM-208ENST00000497849 RANBP1P43487 201 aa12.38□□□□□ -0.43
VIM-208ENST00000497849 TMEM50BP56557 158 aa12.38□□□□□ -0.43
VIM-208ENST00000497849 LGALS9CQ6DKI2 356 aa12.38□□□□□ -0.43
VIM-208ENST00000497849 RAB12Q6IQ22 244 aa12.38□□□□□ -0.43
VIM-208ENST00000497849 URM1Q9BTM9 101 aaKnown RBP12.38□□□□□ -0.43
VIM-208ENST00000497849 FAAP24Q9BTP7 215 aa12.38□□□□□ -0.43
VIM-208ENST00000497849 ATG5Q9H1Y0 275 aa12.38□□□□□ -0.43
VIM-208ENST00000497849 TAF9BQ9HBM6 251 aa12.38□□□□□ -0.43
VIM-208ENST00000497849 PEF1Q9UBV8 284 aaKnown RBP12.38□□□□□ -0.43
VIM-208ENST00000497849 A0A0G2JLM5 398 aa12.37□□□□□ -0.43
VIM-208ENST00000497849 A0A0J9YWU9 116 aa12.37□□□□□ -0.43
VIM-208ENST00000497849 H3BUA1 57 aa12.37□□□□□ -0.43
VIM-208ENST00000497849 FUT3P21217 361 aa12.37□□□□□ -0.43
VIM-208ENST00000497849 DEFA5Q01523 94 aa12.37□□□□□ -0.43
VIM-208ENST00000497849 C6orf201Q7Z4U5 140 aa12.37□□□□□ -0.43
VIM-208ENST00000497849 FAM89BQ8N5H3 189 aa12.37□□□□□ -0.43
VIM-208ENST00000497849 OR5T1Q8NG75 326 aa12.37□□□□□ -0.43
VIM-208ENST00000497849 S100ZQ8WXG8 99 aa12.37□□□□□ -0.43
VIM-208ENST00000497849 SULT4A1Q9BR01 284 aa12.37□□□□□ -0.43
VIM-208ENST00000497849 JPT1Q9UK76 154 aa12.37□□□□□ -0.43
VIM-208ENST00000497849 SPATA2Q9UM82 520 aa12.37□□□□□ -0.43
VIM-208ENST00000497849 FOXI3A8MTJ6 420 aaPredicted RBP12.36□□□□□ -0.43
VIM-208ENST00000497849 MCRIP1C9JLW8 97 aa12.36□□□□□ -0.43
VIM-208ENST00000497849 YPEL1O60688 119 aa12.36□□□□□ -0.43
VIM-208ENST00000497849 HPGDSO60760 199 aa12.36□□□□□ -0.43
VIM-208ENST00000497849 PDCD6O75340 191 aa12.36□□□□□ -0.43
VIM-208ENST00000497849 OR2A4O95047 310 aa12.36□□□□□ -0.43
VIM-208ENST00000497849 CT45A6P0DMU7 189 aa12.36□□□□□ -0.43
VIM-208ENST00000497849 CT45A5P0DMU8 189 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms