RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 NRASP01111 189 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 RLN1P04808 185 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 MGMTP16455 207 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 PI3P19957 117 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 KITLGP21583 273 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 SEC61GP60059 68 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 NKX6-1P78426 367 aaPredicted RBP5.21□□□□□ -1.58
SSBP1-213ENST00000496622 RNPS1Q15287 305 aaKnown RBP5.21□□□□□ -1.58
SSBP1-213ENST00000496622 GSG1Q2KHT4 349 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 ANKRD55Q3KP44 614 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 TCTEX1D4Q5JR98 221 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 OR2T2Q6IF00 324 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 ACOT7LQ6ZUV0 252 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 LRP11Q86VZ4 500 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 MTURNQ8N3F0 131 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 GBGT1Q8N5D6 347 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 GPR146Q96CH1 333 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 RAX2Q96IS3 184 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 P2RX4Q99571 388 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 C1orf43Q9BWL3 253 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 TMEM59Q9BXS4 323 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 FGF23Q9GZV9 251 aaPredicted RBP5.21□□□□□ -1.58
SSBP1-213ENST00000496622 SLC25A31Q9H0C2 315 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 TMEM231Q9H6L2 316 aa5.21□□□□□ -1.58
SSBP1-213ENST00000496622 NOTCH2Q04721 2471 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 SETD2Q9BYW2 2564 aaPredicted RBP5.2□□□□□ -1.58
SSBP1-213ENST00000496622 A0A1W2PRX2 142 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 TMEM14DPA8MWL7 114 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 SDCBPO00560 298 aaPredicted RBP5.2□□□□□ -1.58
SSBP1-213ENST00000496622 CTDSPLO15194 276 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 RBFOX2O43251 390 aaKnown RBP eCLIP5.2□□□□□ -1.58
SSBP1-213ENST00000496622 HIST1H2BKO60814 126 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 SNAPC5O75971 98 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 GCGP01275 180 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 IGHG3P01860 377 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 HIST1H2BJP06899 126 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 PSMB1P20618 241 aaKnown RBP5.2□□□□□ -1.58
SSBP1-213ENST00000496622 HIST1H2BOP23527 126 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 HIST1H2BBP33778 126 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 GPM6AP51674 278 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 HIST1H2BDP58876 126 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 HIST1H2BCP62807 126 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 GABRA6Q16445 453 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 HIST2H2BEQ16778 126 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 ZNF260Q3ZCT1 412 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.2□□□□□ -1.58
SSBP1-213ENST00000496622 FAM219AQ8IW50 185 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 SPICQ8N5J4 248 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 OR51T1Q8NGJ9 327 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 LYPD6BQ8NI32 183 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 KCNG3Q8TAE7 436 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 SSC4DQ8WTU2 575 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 HIST1H2BHQ93079 126 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 PTX4Q96A99 478 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 ZNF488Q96MN9 340 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 HIST1H2BNQ99877 126 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 HIST1H2BMQ99879 126 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 SRSF8Q9BRL6 282 aaKnown RBP5.2□□□□□ -1.58
SSBP1-213ENST00000496622 ST6GALNAC5Q9BVH7 336 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 QTRT1Q9BXR0 403 aaKnown RBP5.2□□□□□ -1.58
SSBP1-213ENST00000496622 CHIAQ9BZP6 476 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 UQCC1Q9NVA1 299 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 CLCF1Q9UBD9 225 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 CSDC2Q9Y534 153 aaKnown RBP5.2□□□□□ -1.58
SSBP1-213ENST00000496622 IGKV1D-8A0A087WSZ0 117 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 A0A1B0GU03 582 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 GEMIN2O14893 280 aaKnown RBP5.2□□□□□ -1.58
SSBP1-213ENST00000496622 VENTXO95231 258 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 AMY2AP04746 511 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 CTSDP07339 412 aaPredicted RBP5.2□□□□□ -1.58
SSBP1-213ENST00000496622 ZBTB25P24278 435 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 MPGP29372 298 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 BLVRBP30043 206 aaPredicted RBP5.2□□□□□ -1.58
SSBP1-213ENST00000496622 HRH1P35367 487 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 DVL1P1P54792 670 aaPredicted RBP5.2□□□□□ -1.58
SSBP1-213ENST00000496622 PLP1P60201 277 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 PCBD1P61457 104 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 LTC4SQ16873 150 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 C2orf68Q2NKX9 166 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 TRAPPC6BQ86SZ2 158 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 OR5D13Q8NGL4 314 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 OR1P1Q8NH06 330 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 MARCH1Q8TCQ1 289 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 MRAP2Q96G30 205 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 SIGMAR1Q99720 223 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 NRIP2Q9BQI9 281 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 PPDPFQ9H3Y8 114 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 PLK3Q9H4B4 646 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 NECAP2Q9NVZ3 263 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 CACNA1DQ01668 2161 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 SHANK1Q9Y566 2161 aa5.2□□□□□ -1.58
SSBP1-213ENST00000496622 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.19□□□□□ -1.58
SSBP1-213ENST00000496622 TNFRSF13BO14836 293 aaPredicted RBP5.19□□□□□ -1.58
SSBP1-213ENST00000496622 XRCC2O43543 280 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 TNFSF13O75888 250 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 CYB5AP00167 134 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 CA6P23280 308 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 OPRM1P35372 400 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 IL13RA1P78552 427 aa5.19□□□□□ -1.58
SSBP1-213ENST00000496622 TDRG1Q3Y452 100 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 194.6 ms