RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 ZNF562Q6V9R5 426 aa12.58□□□□□ -0.4
DNMT3A-215ENST00000496570 LYSMD2Q8IV50 215 aa12.58□□□□□ -0.4
DNMT3A-215ENST00000496570 LINC00482Q8N8I6 264 aa12.58□□□□□ -0.4
DNMT3A-215ENST00000496570 KLHL30-AS1Q8NEE0 82 aa12.58□□□□□ -0.4
DNMT3A-215ENST00000496570 GPX8Q8TED1 209 aa12.58□□□□□ -0.4
DNMT3A-215ENST00000496570 HARBI1Q96MB7 349 aa12.58□□□□□ -0.4
DNMT3A-215ENST00000496570 GPHA2Q96T91 129 aa12.58□□□□□ -0.4
DNMT3A-215ENST00000496570 FAM103A1Q9BTL3 118 aaKnown RBP12.58□□□□□ -0.4
DNMT3A-215ENST00000496570 NOTCH3Q9UM47 2321 aa12.58□□□□□ -0.4
DNMT3A-215ENST00000496570 SLC22A5O76082 557 aa12.57□□□□□ -0.4
DNMT3A-215ENST00000496570 PPYP01298 95 aa12.57□□□□□ -0.4
DNMT3A-215ENST00000496570 RRASP10301 218 aa12.57□□□□□ -0.4
DNMT3A-215ENST00000496570 PRSS3P35030 304 aa12.57□□□□□ -0.4
DNMT3A-215ENST00000496570 CDX1P47902 265 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-215ENST00000496570 CDK10Q15131 360 aa12.57□□□□□ -0.4
DNMT3A-215ENST00000496570 RTL8BQ17RB0 113 aa12.57□□□□□ -0.4
DNMT3A-215ENST00000496570 CXorf66Q5JRM2 361 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-215ENST00000496570 PPP1R27Q86WC6 154 aa12.57□□□□□ -0.4
DNMT3A-215ENST00000496570 CLVS1Q8IUQ0 354 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-215ENST00000496570 ZNF695Q8IW36 515 aa12.57□□□□□ -0.4
DNMT3A-215ENST00000496570 MRPL41Q8IXM3 137 aaKnown RBP12.57□□□□□ -0.4
DNMT3A-215ENST00000496570 GIMAP1Q8WWP7 306 aa12.57□□□□□ -0.4
DNMT3A-215ENST00000496570 RAX2Q96IS3 184 aa12.57□□□□□ -0.4
DNMT3A-215ENST00000496570 P2RX4Q99571 388 aa12.57□□□□□ -0.4
DNMT3A-215ENST00000496570 CCL28Q9NRJ3 127 aa12.57□□□□□ -0.4
DNMT3A-215ENST00000496570 CRYZL1O95825 349 aa12.56□□□□□ -0.4
DNMT3A-215ENST00000496570 PF4P02776 101 aa12.56□□□□□ -0.4
DNMT3A-215ENST00000496570 SLC6A1P30531 599 aa12.56□□□□□ -0.4
DNMT3A-215ENST00000496570 RFX2P48378 723 aa12.56□□□□□ -0.4
DNMT3A-215ENST00000496570 MSMO1Q15800 293 aa12.56□□□□□ -0.4
DNMT3A-215ENST00000496570 ECSCRQ19T08 205 aa12.56□□□□□ -0.4
DNMT3A-215ENST00000496570 DHRS11Q6UWP2 260 aa12.56□□□□□ -0.4
DNMT3A-215ENST00000496570 KCTD9Q7L273 389 aa12.56□□□□□ -0.4
DNMT3A-215ENST00000496570 DUX3Q96PT4 197 aa12.56□□□□□ -0.4
DNMT3A-215ENST00000496570 MIXL1Q9H2W2 232 aa12.56□□□□□ -0.4
DNMT3A-215ENST00000496570 IFT46Q9NQC8 304 aa12.56□□□□□ -0.4
DNMT3A-215ENST00000496570 SHOXO15266 292 aa12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 FCGR3BO75015 233 aa12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 IGLL1P15814 213 aa12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 RPL5P46777 297 aaKnown RBP12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 TMBIM6P55061 237 aa12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 UBE2KP61086 200 aa12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 DYRK1AQ13627 763 aa12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 FXYD3Q14802 87 aa12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 DEFB136Q30KP8 78 aa12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 OR2B11Q5JQS5 317 aa12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 MZT2AQ6P582 158 aa12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 SNX29P2Q8IUI4 249 aa12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 MFSD4AQ8N468 514 aa12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 ZNF491Q8N8L2 437 aa12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 OSR1Q8TAX0 266 aaPredicted RBP12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 SECTM1Q8WVN6 248 aa12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 HSD17B10Q99714 261 aaKnown RBP12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 GNB4Q9HAV0 340 aa12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 ADAM30Q9UKF2 790 aa12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 MRPS7Q9Y2R9 242 aaKnown RBP12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 A3GALT2U3KPV4 340 aa12.55□□□□□ -0.4
DNMT3A-215ENST00000496570 NUDT19A8MXV4 375 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 I3L521 148 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 PMP2P02689 132 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 CD33P20138 364 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 MYCNOSP40205 109 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 RAB9AP51151 201 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 AKIRIN2Q53H80 203 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 ASPHD1Q5U4P2 390 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 ZNF66Q6ZN08 573 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 IDO2Q6ZQW0 420 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 ZNF818PQ6ZRF7 136 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 TEX45Q8NA69 505 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 LFNGQ8NES3 379 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 DYNC2LI1Q8TCX1 351 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 CASTOR1Q8WTX7 329 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 RAB2BQ8WUD1 216 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 C4orf3Q8WVX3 66 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 AP3S1Q92572 193 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 ARPC1AQ92747 370 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 BCL7BQ9BQE9 202 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 SCPEP1Q9HB40 452 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 TAS2R8Q9NYW2 309 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 EHFQ9NZC4 300 aa12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 FOXA2Q9Y261 457 aaPredicted RBP12.54□□□□□ -0.4
DNMT3A-215ENST00000496570 SMIM31A0A1B0GVY4 71 aa12.53□□□□□ -0.4
DNMT3A-215ENST00000496570 A0A1W2PN81 502 aa12.53□□□□□ -0.4
DNMT3A-215ENST00000496570 CTDSP2O14595 271 aa12.53□□□□□ -0.4
DNMT3A-215ENST00000496570 TNFSF12O43508 249 aa12.53□□□□□ -0.4
DNMT3A-215ENST00000496570 SAA1P0DJI8 122 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-215ENST00000496570 CHRNA7P36544 502 aa12.53□□□□□ -0.4
DNMT3A-215ENST00000496570 FXYD4P59646 89 aa12.53□□□□□ -0.4
DNMT3A-215ENST00000496570 CBX3Q13185 183 aa12.53□□□□□ -0.4
DNMT3A-215ENST00000496570 UNQ5815/PRO19632Q6UWF5 114 aa12.53□□□□□ -0.4
DNMT3A-215ENST00000496570 TCTEX1D1Q8N7M0 179 aa12.53□□□□□ -0.4
DNMT3A-215ENST00000496570 UBE2E2Q96LR5 201 aa12.53□□□□□ -0.4
DNMT3A-215ENST00000496570 ABHD1Q96SE0 405 aa12.53□□□□□ -0.4
DNMT3A-215ENST00000496570 SLC5A7Q9GZV3 580 aa12.53□□□□□ -0.4
DNMT3A-215ENST00000496570 TNCP24821 2201 aa12.52□□□□□ -0.41
DNMT3A-215ENST00000496570 FAM25AB3EWG3 89 aa12.52□□□□□ -0.41
DNMT3A-215ENST00000496570 FAM25CB3EWG5 89 aa12.52□□□□□ -0.41
DNMT3A-215ENST00000496570 FAM25GB3EWG6 89 aa12.52□□□□□ -0.41
DNMT3A-215ENST00000496570 H3BMQ9 156 aa12.52□□□□□ -0.41
DNMT3A-215ENST00000496570 CCL24O00175 119 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms