RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 CT45A6P0DMU7 189 aa11.25□□□□□ -0.61
CXCL12-208ENST00000496375 CT45A5P0DMU8 189 aa11.25□□□□□ -0.61
CXCL12-208ENST00000496375 CT45A7P0DMV0 189 aa11.25□□□□□ -0.61
CXCL12-208ENST00000496375 CDX1P47902 265 aaPredicted RBP11.25□□□□□ -0.61
CXCL12-208ENST00000496375 F2RL1P55085 397 aa11.25□□□□□ -0.61
CXCL12-208ENST00000496375 MRPS10P82664 201 aaKnown RBP11.25□□□□□ -0.61
CXCL12-208ENST00000496375 MSMO1Q15800 293 aa11.25□□□□□ -0.61
CXCL12-208ENST00000496375 OVCH2Q7RTZ1 564 aa11.25□□□□□ -0.61
CXCL12-208ENST00000496375 MFSD4AQ8N468 514 aa11.25□□□□□ -0.61
CXCL12-208ENST00000496375 FAM71E2Q8N5Q1 922 aa11.25□□□□□ -0.61
CXCL12-208ENST00000496375 C5orf30Q96GV9 206 aa11.25□□□□□ -0.61
CXCL12-208ENST00000496375 OR2D2Q9H210 308 aa11.25□□□□□ -0.61
CXCL12-208ENST00000496375 IFT46Q9NQC8 304 aa11.25□□□□□ -0.61
CXCL12-208ENST00000496375 SDHAF2Q9NX18 166 aa11.25□□□□□ -0.61
CXCL12-208ENST00000496375 TENM3Q9P273 2699 aa11.25□□□□□ -0.61
CXCL12-208ENST00000496375 H0YJW9 148 aa11.24□□□□□ -0.61
CXCL12-208ENST00000496375 CTDSPLO15194 276 aa11.24□□□□□ -0.61
CXCL12-208ENST00000496375 RGS5O15539 181 aa11.24□□□□□ -0.61
CXCL12-208ENST00000496375 SLC22A5O76082 557 aa11.24□□□□□ -0.61
CXCL12-208ENST00000496375 VDAC1P21796 283 aa11.24□□□□□ -0.61
CXCL12-208ENST00000496375 MC5RP33032 325 aa11.24□□□□□ -0.61
CXCL12-208ENST00000496375 RCVRNP35243 200 aa11.24□□□□□ -0.61
CXCL12-208ENST00000496375 LUMP51884 338 aaPredicted RBP11.24□□□□□ -0.61
CXCL12-208ENST00000496375 TAS2R46P59540 309 aa11.24□□□□□ -0.61
CXCL12-208ENST00000496375 ARPC4P59998 168 aa11.24□□□□□ -0.61
CXCL12-208ENST00000496375 CFHR3Q02985 330 aa11.24□□□□□ -0.61
CXCL12-208ENST00000496375 CDK10Q15131 360 aa11.24□□□□□ -0.61
CXCL12-208ENST00000496375 ZNF660Q6AZW8 331 aaPredicted RBP11.24□□□□□ -0.61
CXCL12-208ENST00000496375 RNF152Q8N8N0 203 aa11.24□□□□□ -0.61
CXCL12-208ENST00000496375 OR5M8Q8NGP6 311 aa11.24□□□□□ -0.61
CXCL12-208ENST00000496375 GIMAP1Q8WWP7 306 aa11.24□□□□□ -0.61
CXCL12-208ENST00000496375 ABHD1Q96SE0 405 aa11.24□□□□□ -0.61
CXCL12-208ENST00000496375 SOSTQ9BQB4 213 aa11.24□□□□□ -0.61
CXCL12-208ENST00000496375 MRPS7Q9Y2R9 242 aaKnown RBP11.24□□□□□ -0.61
CXCL12-208ENST00000496375 HUWE1Q7Z6Z7 4374 aaKnown RBP11.24□□□□□ -0.61
CXCL12-208ENST00000496375 DNAH7Q8WXX0 4024 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 MEIS3P1A6NDR6 274 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 RAMP3O60896 148 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 PFDN1O60925 122 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 RBBP9O75884 186 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 IGLV2-14P01704 120 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 IGHG4P01861 327 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 OR5H8P0DN80 308 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 NFYAP23511 347 aaPredicted RBP11.23□□□□□ -0.61
CXCL12-208ENST00000496375 ETV6P41212 452 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 TAGLNQ01995 201 aaKnown RBP11.23□□□□□ -0.61
CXCL12-208ENST00000496375 SSBP1Q04837 148 aaKnown RBP11.23□□□□□ -0.61
CXCL12-208ENST00000496375 DYRK1AQ13627 763 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 PYHIN1Q6K0P9 492 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 DHRS11Q6UWP2 260 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 SNX29P2Q8IUI4 249 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 LYSMD2Q8IV50 215 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 ZNF645Q8N7E2 425 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 WWC2-AS2Q96NR7 200 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 RNF5Q99942 180 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 MTFP1Q9UDX5 166 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 RNF150Q9ULK6 438 aa11.23□□□□□ -0.61
CXCL12-208ENST00000496375 IGKV1D-13A0A0B4J2D9 117 aa11.22□□□□□ -0.61
CXCL12-208ENST00000496375 GABARAPH6UMI1 98 aa11.22□□□□□ -0.61
CXCL12-208ENST00000496375 NDUFA3O95167 84 aa11.22□□□□□ -0.61
CXCL12-208ENST00000496375 PPYP01298 95 aa11.22□□□□□ -0.61
CXCL12-208ENST00000496375 IGF1P05019 195 aa11.22□□□□□ -0.61
CXCL12-208ENST00000496375 IGKV1-13P0DP09 117 aa11.22□□□□□ -0.61
CXCL12-208ENST00000496375 ACTBP60709 375 aa11.22□□□□□ -0.61
CXCL12-208ENST00000496375 EIF4EBP1Q13541 118 aaPredicted RBP11.22□□□□□ -0.61
CXCL12-208ENST00000496375 MMDQ15546 238 aa11.22□□□□□ -0.61
CXCL12-208ENST00000496375 C9orf66Q5T8R8 295 aa11.22□□□□□ -0.61
CXCL12-208ENST00000496375 FAM131AQ6UXB0 335 aa11.22□□□□□ -0.61
CXCL12-208ENST00000496375 PDPNQ86YL7 162 aa11.22□□□□□ -0.61
CXCL12-208ENST00000496375 CENPSQ8N2Z9 138 aa11.22□□□□□ -0.61
CXCL12-208ENST00000496375 ZNF383Q8NA42 475 aa11.22□□□□□ -0.61
CXCL12-208ENST00000496375 NPBQ8NG41 125 aa11.22□□□□□ -0.61
CXCL12-208ENST00000496375 SMIM4Q8WVI0 70 aa11.22□□□□□ -0.61
CXCL12-208ENST00000496375 C4orf3Q8WVX3 66 aa11.22□□□□□ -0.61
CXCL12-208ENST00000496375 DDB2Q92466 427 aa11.22□□□□□ -0.61
CXCL12-208ENST00000496375 C6orf62Q9GZU0 229 aaPredicted RBP11.22□□□□□ -0.61
CXCL12-208ENST00000496375 ZNF107Q9UII5 783 aaPredicted RBP11.22□□□□□ -0.61
CXCL12-208ENST00000496375 RBMX2Q9Y388 322 aaKnown RBP11.22□□□□□ -0.61
CXCL12-208ENST00000496375 WASHC3Q9Y3C0 194 aa11.22□□□□□ -0.61
CXCL12-208ENST00000496375 M0R1X1 148 aa11.21□□□□□ -0.61
CXCL12-208ENST00000496375 TBPP20226 339 aa11.21□□□□□ -0.61
CXCL12-208ENST00000496375 PSMB8P28062 276 aa11.21□□□□□ -0.61
CXCL12-208ENST00000496375 FCGR2CP31995 323 aa11.21□□□□□ -0.61
CXCL12-208ENST00000496375 TNFSF8P32971 234 aa11.21□□□□□ -0.61
CXCL12-208ENST00000496375 DUTP33316 252 aaKnown RBP11.21□□□□□ -0.61
CXCL12-208ENST00000496375 TRIM16LQ309B1 348 aa11.21□□□□□ -0.61
CXCL12-208ENST00000496375 ACTBL2Q562R1 376 aa11.21□□□□□ -0.61
CXCL12-208ENST00000496375 SPANXN2Q5MJ10 180 aa11.21□□□□□ -0.61
CXCL12-208ENST00000496375 OR52I2Q8NH67 350 aa11.21□□□□□ -0.61
CXCL12-208ENST00000496375 DIRAS2Q96HU8 199 aa11.21□□□□□ -0.61
CXCL12-208ENST00000496375 ADTRPQ96IZ2 230 aa11.21□□□□□ -0.61
CXCL12-208ENST00000496375 PRR25Q96S07 402 aa11.21□□□□□ -0.61
CXCL12-208ENST00000496375 ZNF580Q9UK33 172 aa11.21□□□□□ -0.61
CXCL12-208ENST00000496375 SEC14L6B5MCN3 397 aa11.2□□□□□ -0.62
CXCL12-208ENST00000496375 GSTZ1O43708 216 aaPredicted RBP11.2□□□□□ -0.62
CXCL12-208ENST00000496375 AADACP22760 399 aa11.2□□□□□ -0.62
CXCL12-208ENST00000496375 ECI1P42126 302 aa11.2□□□□□ -0.62
CXCL12-208ENST00000496375 FHL3Q13643 280 aa11.2□□□□□ -0.62
CXCL12-208ENST00000496375 OR5H2Q8NGV7 314 aa11.2□□□□□ -0.62
CXCL12-208ENST00000496375 MOB3AQ96BX8 217 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms