RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 ZNF525Q8N782 197 aa13.36□□□□□ -0.27
HLA-A-208ENST00000496081 OR4S2Q8NH73 311 aa13.36□□□□□ -0.27
HLA-A-208ENST00000496081 SSBP3Q9BWW4 388 aaPredicted RBP13.36□□□□□ -0.27
HLA-A-208ENST00000496081 TENM4Q6N022 2769 aa13.36□□□□□ -0.27
HLA-A-208ENST00000496081 A1L4Q6 167 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 SYNGR2O43760 224 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 RBP4P02753 201 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 LIPFP07098 398 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 DLX1P56177 255 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 EWSR1Q01844 656 aaKnown RBP eCLIP13.35□□□□□ -0.27
HLA-A-208ENST00000496081 NHLH2Q02577 135 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 OR10X1Q8NGY0 326 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 PCNPQ8WW12 178 aaKnown RBP13.35□□□□□ -0.27
HLA-A-208ENST00000496081 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.35□□□□□ -0.27
HLA-A-208ENST00000496081 HELZ2Q9BYK8 2649 aaKnown RBP13.35□□□□□ -0.27
HLA-A-208ENST00000496081 IGSF23A1L1A6 192 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 FAM90A26D6RGX4 464 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 CRYZL1O95825 349 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 IGHV4-39P01824 125 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 TPT1P13693 172 aaKnown RBP13.35□□□□□ -0.27
HLA-A-208ENST00000496081 NQO2P16083 231 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 CLLU1Q5K131 121 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 RPL7L1Q6DKI1 246 aaKnown RBP13.35□□□□□ -0.27
HLA-A-208ENST00000496081 SSX9Q7RTT3 188 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 BAP18Q8IXM2 172 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 VKORC1L1Q8N0U8 176 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 TMEM252Q8N6L7 170 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 ST6GALNAC6Q969X2 333 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 RBMXL1Q96E39 390 aaKnown RBP13.35□□□□□ -0.27
HLA-A-208ENST00000496081 PHYHIPLQ96FC7 376 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 RAB40CQ96S21 281 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 CCL19Q99731 98 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 SMIM3Q9BZL3 60 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 HSPB7Q9UBY9 170 aa13.35□□□□□ -0.27
HLA-A-208ENST00000496081 LRRK2Q5S007 2527 aa13.34□□□□□ -0.27
HLA-A-208ENST00000496081 LOC105371242A0A075B767 164 aa13.34□□□□□ -0.27
HLA-A-208ENST00000496081 IGHV2-26A0A0B4J1V2 119 aa13.34□□□□□ -0.27
HLA-A-208ENST00000496081 OR9G9P0C7N8 305 aa13.34□□□□□ -0.27
HLA-A-208ENST00000496081 TNFRSF9Q07011 255 aa13.34□□□□□ -0.27
HLA-A-208ENST00000496081 DIAPH2-AS1Q14236 149 aa13.34□□□□□ -0.27
HLA-A-208ENST00000496081 TMEM186Q96B77 213 aa13.34□□□□□ -0.27
HLA-A-208ENST00000496081 MRPL20Q9BYC9 149 aaKnown RBP13.34□□□□□ -0.27
HLA-A-208ENST00000496081 ONECUT1Q9UBC0 465 aa13.34□□□□□ -0.27
HLA-A-208ENST00000496081 ARHGAP32A7KAX9 2087 aa13.34□□□□□ -0.27
HLA-A-208ENST00000496081 REG1BP48304 166 aa13.33□□□□□ -0.28
HLA-A-208ENST00000496081 ZNF137PP52743 207 aa13.33□□□□□ -0.28
HLA-A-208ENST00000496081 UBE2KP61086 200 aa13.33□□□□□ -0.28
HLA-A-208ENST00000496081 RAB14P61106 215 aa13.33□□□□□ -0.28
HLA-A-208ENST00000496081 PRB3Q04118 309 aaPredicted RBP13.33□□□□□ -0.28
HLA-A-208ENST00000496081 FAM71F2Q6NXP2 309 aa13.33□□□□□ -0.28
HLA-A-208ENST00000496081 TNFRSF14Q92956 283 aa13.33□□□□□ -0.28
HLA-A-208ENST00000496081 BPESC1Q9GZL8 116 aa13.33□□□□□ -0.28
HLA-A-208ENST00000496081 SLC25A31Q9H0C2 315 aa13.33□□□□□ -0.28
HLA-A-208ENST00000496081 WFDC1Q9HC57 220 aa13.33□□□□□ -0.28
HLA-A-208ENST00000496081 SLC35D1Q9NTN3 355 aa13.33□□□□□ -0.28
HLA-A-208ENST00000496081 WSB1Q9Y6I7 421 aa13.33□□□□□ -0.28
HLA-A-208ENST00000496081 hCG_1809904A0A1W2PP81 198 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 A0A1W2PPE2 198 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 A0A1W2PR64 198 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 A0A1W2PRV1 198 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 FAM90A9PA6NNJ1 464 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 IGLV1-47P01700 117 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 IGHV2-5P01817 119 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 IAPPP10997 89 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 ERVK-16P61578 105 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 RPL23AP62750 156 aaKnown RBP13.32□□□□□ -0.28
HLA-A-208ENST00000496081 SP5Q6BEB4 398 aaPredicted RBP13.32□□□□□ -0.28
HLA-A-208ENST00000496081 Q8N7P7 452 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 RBKSQ9H477 322 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 H3BP45 60 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 TXNL1O43396 289 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 GAPDHP04406 335 aaKnown RBP13.32□□□□□ -0.28
HLA-A-208ENST00000496081 IGKV1-16P04430 117 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 ARHGDIBP52566 201 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 ARF6P62330 175 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 RTL8BQ17RB0 113 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 FAM74A1Q5RGS3 127 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 OR5AN1Q8NGI8 311 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 SMIM8Q96KF7 97 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 RHOVQ96L33 236 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 CLEC7AQ9BXN2 247 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 TMEM140Q9NV12 185 aa13.32□□□□□ -0.28
HLA-A-208ENST00000496081 GCN1Q92616 2671 aaKnown RBP13.31□□□□□ -0.28
HLA-A-208ENST00000496081 FASNP49327 2511 aaKnown RBP13.31□□□□□ -0.28
HLA-A-208ENST00000496081 H0YJW9 148 aa13.31□□□□□ -0.28
HLA-A-208ENST00000496081 RBMXL2O75526 392 aaKnown RBP13.31□□□□□ -0.28
HLA-A-208ENST00000496081 JTBO76095 146 aa13.31□□□□□ -0.28
HLA-A-208ENST00000496081 NMBP08949 121 aa13.31□□□□□ -0.28
HLA-A-208ENST00000496081 ZFP36P26651 326 aaKnown RBP13.31□□□□□ -0.28
HLA-A-208ENST00000496081 PRRX1P54821 245 aa13.31□□□□□ -0.28
HLA-A-208ENST00000496081 TAS2R30P59541 319 aa13.31□□□□□ -0.28
HLA-A-208ENST00000496081 HLA-DRB5Q30154 266 aa13.31□□□□□ -0.28
HLA-A-208ENST00000496081 AARDQ4LEZ3 155 aa13.31□□□□□ -0.28
HLA-A-208ENST00000496081 DHRS7BQ6IAN0 325 aaPredicted RBP13.31□□□□□ -0.28
HLA-A-208ENST00000496081 OR13D1Q8NGV5 346 aa13.31□□□□□ -0.28
HLA-A-208ENST00000496081 NABP2Q9BQ15 211 aa13.31□□□□□ -0.28
HLA-A-208ENST00000496081 QTRT1Q9BXR0 403 aaKnown RBP13.31□□□□□ -0.28
HLA-A-208ENST00000496081 PSENENQ9NZ42 101 aa13.31□□□□□ -0.28
HLA-A-208ENST00000496081 TRAV3A0A0B4J244 114 aa13.3□□□□□ -0.28
HLA-A-208ENST00000496081 MED6O75586 246 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms