RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 APH1BQ8WW43 257 aa9.98□□□□□ -0.81
COL1A1-209ENST00000495677 DERL3Q96Q80 235 aa9.98□□□□□ -0.81
COL1A1-209ENST00000495677 MLXQ9UH92 298 aa9.98□□□□□ -0.81
COL1A1-209ENST00000495677 A0A1W2PPK0 400 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 TMEM213A2RRL7 107 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 M0R1X1 148 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 SHOXO15266 292 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 ATP5HO75947 161 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 CD1AP06126 327 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 SCTP09683 121 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 C8orf88P0DMB2 117 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 APELAP0DMC3 54 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 UBE2KP61086 200 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 PRR20EP86478 221 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 PRR20CP86479 221 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 PRR20DP86480 221 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 PRR20BP86481 221 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 PRR20AP86496 221 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 PRSS8Q16651 343 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 KLK9Q2XQG4 91 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 C15orf32Q32M92 178 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 C1orf146Q5VVC0 180 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 OR4A47Q6IF82 309 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 LINC00336Q6ZUF6 198 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 SLC25A42Q86VD7 318 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 TMEM59Q9BXS4 323 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 CHMP1AQ9HD42 196 aaPredicted RBP9.97□□□□□ -0.81
COL1A1-209ENST00000495677 Q9N2K0 584 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 PLEKHJ1Q9NW61 149 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 KLK9Q9UKQ9 250 aa9.97□□□□□ -0.81
COL1A1-209ENST00000495677 LOC100130705A0A1B0GUX0 176 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 IRGMA1A4Y4 181 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 PPP5D1E7EU14 171 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 EBAG9O00559 213 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 PRH1P02810 166 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 CD37P11049 281 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 CBX3Q13185 183 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 TPBGQ13641 420 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 TNXAQ16473 311 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 DEFB135Q30KP9 77 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 VMA21Q3ZAQ7 101 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 FAM106AQ4KMX7 169 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 C1orf100Q5SVJ3 147 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 UXS1Q8NBZ7 420 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 SETD6Q8TBK2 473 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 MARC2Q969Z3 335 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 SPIN2AQ99865 258 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 SPIN2BQ9BPZ2 258 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 RDH8Q9NYR8 311 aa9.96□□□□□ -0.82
COL1A1-209ENST00000495677 DIMT1Q9UNQ2 313 aaKnown RBP9.96□□□□□ -0.82
COL1A1-209ENST00000495677 IGKV1-6A0A0C4DH72 117 aa9.95□□□□□ -0.82
COL1A1-209ENST00000495677 TMEM14DPA8MWL7 114 aa9.95□□□□□ -0.82
COL1A1-209ENST00000495677 MPPED1O15442 326 aa9.95□□□□□ -0.82
COL1A1-209ENST00000495677 SCAF4O95104 1147 aaKnown RBP9.95□□□□□ -0.82
COL1A1-209ENST00000495677 HLA-AP01891 365 aaKnown RBP9.95□□□□□ -0.82
COL1A1-209ENST00000495677 SRMP19623 302 aa9.95□□□□□ -0.82
COL1A1-209ENST00000495677 SERPINB10P48595 397 aa9.95□□□□□ -0.82
COL1A1-209ENST00000495677 QRFPP83859 136 aa9.95□□□□□ -0.82
COL1A1-209ENST00000495677 RTL8BQ17RB0 113 aa9.95□□□□□ -0.82
COL1A1-209ENST00000495677 OR10K2Q6IF99 312 aa9.95□□□□□ -0.82
COL1A1-209ENST00000495677 FAM89BQ8N5H3 189 aa9.95□□□□□ -0.82
COL1A1-209ENST00000495677 OR2C3Q8N628 320 aa9.95□□□□□ -0.82
COL1A1-209ENST00000495677 STPG3Q8N7X2 389 aa9.95□□□□□ -0.82
COL1A1-209ENST00000495677 CACNG8Q8WXS5 425 aa9.95□□□□□ -0.82
COL1A1-209ENST00000495677 NICN1Q9BSH3 213 aa9.95□□□□□ -0.82
COL1A1-209ENST00000495677 SDHAF2Q9NX18 166 aa9.95□□□□□ -0.82
COL1A1-209ENST00000495677 HSF4Q9ULV5 492 aa9.95□□□□□ -0.82
COL1A1-209ENST00000495677 ZNF257Q9Y2Q1 563 aa9.95□□□□□ -0.82
COL1A1-209ENST00000495677 A0A1B0GVY2 172 aa9.94□□□□□ -0.82
COL1A1-209ENST00000495677 CREBL2O60519 120 aaPredicted RBP9.94□□□□□ -0.82
COL1A1-209ENST00000495677 WBP4O75554 376 aaKnown RBP9.94□□□□□ -0.82
COL1A1-209ENST00000495677 OR2J3O76001 311 aa9.94□□□□□ -0.82
COL1A1-209ENST00000495677 DIRAS3O95661 229 aa9.94□□□□□ -0.82
COL1A1-209ENST00000495677 BPNT1O95861 308 aa9.94□□□□□ -0.82
COL1A1-209ENST00000495677 MYL12AP19105 171 aa9.94□□□□□ -0.82
COL1A1-209ENST00000495677 MAPK3P27361 379 aaPredicted RBP9.94□□□□□ -0.82
COL1A1-209ENST00000495677 TAS2R43P59537 309 aa9.94□□□□□ -0.82
COL1A1-209ENST00000495677 UNC119Q13432 240 aa9.94□□□□□ -0.82
COL1A1-209ENST00000495677 TTC23Q5W5X9 447 aa9.94□□□□□ -0.82
COL1A1-209ENST00000495677 SLC38A6Q8IZM9 456 aa9.94□□□□□ -0.82
COL1A1-209ENST00000495677 OR1L6Q8NGR2 347 aa9.94□□□□□ -0.82
COL1A1-209ENST00000495677 OSR1Q8TAX0 266 aaPredicted RBP9.94□□□□□ -0.82
COL1A1-209ENST00000495677 MFFQ9GZY8 342 aa9.94□□□□□ -0.82
COL1A1-209ENST00000495677 MRPL27Q9P0M9 148 aaKnown RBP9.94□□□□□ -0.82
COL1A1-209ENST00000495677 CLEC2DQ9UHP7 191 aa9.94□□□□□ -0.82
COL1A1-209ENST00000495677 AK3Q9UIJ7 227 aa9.94□□□□□ -0.82
COL1A1-209ENST00000495677 PKHD1P08F94 4074 aa9.93□□□□□ -0.82
COL1A1-209ENST00000495677 GALP22466 123 aa9.93□□□□□ -0.82
COL1A1-209ENST00000495677 ARL3P36405 182 aa9.93□□□□□ -0.82
COL1A1-209ENST00000495677 ELLP55199 621 aaPredicted RBP9.93□□□□□ -0.82
COL1A1-209ENST00000495677 MED21Q13503 144 aa9.93□□□□□ -0.82
COL1A1-209ENST00000495677 CDK10Q15131 360 aa9.93□□□□□ -0.82
COL1A1-209ENST00000495677 SMN1Q16637 294 aaKnown RBP9.93□□□□□ -0.82
COL1A1-209ENST00000495677 RBPMS2Q6ZRY4 209 aaKnown RBP9.93□□□□□ -0.82
COL1A1-209ENST00000495677 MMD2Q8IY49 270 aa9.93□□□□□ -0.82
COL1A1-209ENST00000495677 CBR4Q8N4T8 237 aa9.93□□□□□ -0.82
COL1A1-209ENST00000495677 ZFP41Q8N8Y5 198 aa9.93□□□□□ -0.82
COL1A1-209ENST00000495677 OR4A4PQ8NGN8 299 aa9.93□□□□□ -0.82
COL1A1-209ENST00000495677 ACOT12Q8WYK0 555 aa9.93□□□□□ -0.82
COL1A1-209ENST00000495677 ADTRPQ96IZ2 230 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms