RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 FAM106CPP0CH98 169 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 OR5H8P0DN80 308 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 HLA-GP17693 338 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 TMEM95Q3KNT9 176 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 TMEM128Q5BJH2 165 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 DHRS11Q6UWP2 260 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 Q6ZPA2 131 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 C11orf44Q8N8P7 122 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 CHMP1AQ9HD42 196 aaPredicted RBP10.52□□□□□ -0.73
ERCC3-209ENST00000494464 Q9N2K0 584 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 MBNL3Q9NUK0 354 aaKnown RBP10.52□□□□□ -0.73
ERCC3-209ENST00000494464 MOB4Q9Y3A3 225 aa10.52□□□□□ -0.73
ERCC3-209ENST00000494464 A0A0B4J2A0 478 aa10.51□□□□□ -0.73
ERCC3-209ENST00000494464 G3V3Q6 166 aa10.51□□□□□ -0.73
ERCC3-209ENST00000494464 GOSR2O14653 212 aa10.51□□□□□ -0.73
ERCC3-209ENST00000494464 HSD17B6O14756 317 aa10.51□□□□□ -0.73
ERCC3-209ENST00000494464 SPINT2O43291 252 aa10.51□□□□□ -0.73
ERCC3-209ENST00000494464 SNAPC5O75971 98 aa10.51□□□□□ -0.73
ERCC3-209ENST00000494464 CTSDP07339 412 aaPredicted RBP10.51□□□□□ -0.73
ERCC3-209ENST00000494464 KIR2DS1Q14954 304 aa10.51□□□□□ -0.73
ERCC3-209ENST00000494464 ZNF880Q6PDB4 577 aa10.51□□□□□ -0.73
ERCC3-209ENST00000494464 MOB1BQ7L9L4 216 aa10.51□□□□□ -0.73
ERCC3-209ENST00000494464 NDUFA11Q86Y39 141 aa10.51□□□□□ -0.73
ERCC3-209ENST00000494464 C9orf62Q8N4C0 152 aa10.51□□□□□ -0.73
ERCC3-209ENST00000494464 ADAD2Q8NCV1 583 aaKnown RBP10.51□□□□□ -0.73
ERCC3-209ENST00000494464 OR5M8Q8NGP6 311 aa10.51□□□□□ -0.73
ERCC3-209ENST00000494464 OR2T35Q8NGX2 323 aa10.51□□□□□ -0.73
ERCC3-209ENST00000494464 TMEM230Q96A57 120 aa10.51□□□□□ -0.73
ERCC3-209ENST00000494464 PHB2Q99623 299 aa10.51□□□□□ -0.73
ERCC3-209ENST00000494464 ZNF2Q9BSG1 426 aaPredicted RBP10.51□□□□□ -0.73
ERCC3-209ENST00000494464 SHPKQ9UHJ6 478 aa10.51□□□□□ -0.73
ERCC3-209ENST00000494464 TRAPPC2LQ9UL33 140 aa10.51□□□□□ -0.73
ERCC3-209ENST00000494464 A0A1W2PPE3 182 aa10.5□□□□□ -0.73
ERCC3-209ENST00000494464 OPN1MWP04001 364 aa10.5□□□□□ -0.73
ERCC3-209ENST00000494464 SNRNP70P08621 437 aaKnown RBP10.5□□□□□ -0.73
ERCC3-209ENST00000494464 OPN1MW2P0DN77 364 aa10.5□□□□□ -0.73
ERCC3-209ENST00000494464 OPN1MW3P0DN78 364 aa10.5□□□□□ -0.73
ERCC3-209ENST00000494464 CD28P10747 220 aa10.5□□□□□ -0.73
ERCC3-209ENST00000494464 IL3RAP26951 378 aa10.5□□□□□ -0.73
ERCC3-209ENST00000494464 ZNF137PP52743 207 aa10.5□□□□□ -0.73
ERCC3-209ENST00000494464 UCP3P55916 312 aa10.5□□□□□ -0.73
ERCC3-209ENST00000494464 H2BFSP57053 126 aa10.5□□□□□ -0.73
ERCC3-209ENST00000494464 DIAPH2-AS1Q14236 149 aa10.5□□□□□ -0.73
ERCC3-209ENST00000494464 ABCA11PQ4W5N1 156 aa10.5□□□□□ -0.73
ERCC3-209ENST00000494464 DRAM1Q8N682 238 aa10.5□□□□□ -0.73
ERCC3-209ENST00000494464 ZNF439Q8NDP4 499 aa10.5□□□□□ -0.73
ERCC3-209ENST00000494464 FAM110DQ8TAY7 271 aaPredicted RBP10.5□□□□□ -0.73
ERCC3-209ENST00000494464 UBALD1Q8TB05 177 aa10.5□□□□□ -0.73
ERCC3-209ENST00000494464 MRPL30Q8TCC3 161 aaKnown RBP10.5□□□□□ -0.73
ERCC3-209ENST00000494464 RTBDNQ9BSG5 229 aaPredicted RBP10.5□□□□□ -0.73
ERCC3-209ENST00000494464 FXYD6Q9H0Q3 95 aa10.5□□□□□ -0.73
ERCC3-209ENST00000494464 PAIP2BQ9ULR5 123 aaKnown RBP10.5□□□□□ -0.73
ERCC3-209ENST00000494464 MGAT4AQ9UM21 535 aa10.5□□□□□ -0.73
ERCC3-209ENST00000494464 C14orf166Q9Y224 244 aaKnown RBP10.5□□□□□ -0.73
ERCC3-209ENST00000494464 IGHV3-43A0A0B4J1X8 118 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 IGHV1-3A0A0C4DH29 117 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 DBX1A6NMT0 343 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 TRDCB7Z8K6 153 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 FGF16O43320 207 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 TXNL1O43396 289 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 KCNAB3O43448 404 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 SLC22A5O76082 557 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 SFT2D2O95562 160 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 HBZP02008 142 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 GAPDHP04406 335 aaKnown RBP10.49□□□□□ -0.73
ERCC3-209ENST00000494464 CTXN2P0C2S0 81 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 IGHV3-43DP0DP04 118 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 PGAM2P15259 253 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 RCC1P18754 421 aaPredicted RBP10.49□□□□□ -0.73
ERCC3-209ENST00000494464 IFITM2Q01629 132 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 EBI3Q14213 229 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 LY6G6FQ5SQ64 297 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 LAMTOR1Q6IAA8 161 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 SLC25A48Q6ZT89 311 aaKnown RBP10.49□□□□□ -0.73
ERCC3-209ENST00000494464 ST6GALNAC6Q969X2 333 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 MOB3AQ96BX8 217 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 CITED2Q99967 270 aaPredicted RBP10.49□□□□□ -0.73
ERCC3-209ENST00000494464 GON7Q9BXV9 100 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 SLA2Q9H6Q3 261 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 GNG12Q9UBI6 72 aa10.49□□□□□ -0.73
ERCC3-209ENST00000494464 ADARB2-AS1A8MUL3 147 aa10.48□□□□□ -0.73
ERCC3-209ENST00000494464 IGKV1D-33P01593 117 aa10.48□□□□□ -0.73
ERCC3-209ENST00000494464 IGKV1-33P01594 117 aa10.48□□□□□ -0.73
ERCC3-209ENST00000494464 TMEM11P17152 192 aa10.48□□□□□ -0.73
ERCC3-209ENST00000494464 AKR1C4P17516 323 aa10.48□□□□□ -0.73
ERCC3-209ENST00000494464 VAMP1P23763 118 aa10.48□□□□□ -0.73
ERCC3-209ENST00000494464 HLA-DRB3P79483 266 aa10.48□□□□□ -0.73
ERCC3-209ENST00000494464 DEFA6Q01524 100 aa10.48□□□□□ -0.73
ERCC3-209ENST00000494464 HES1Q14469 280 aa10.48□□□□□ -0.73
ERCC3-209ENST00000494464 HIST2H2BDQ6DRA6 164 aa10.48□□□□□ -0.73
ERCC3-209ENST00000494464 LIN54Q6MZP7 749 aa10.48□□□□□ -0.73
ERCC3-209ENST00000494464 C5orf56Q8N8D9 126 aa10.48□□□□□ -0.73
ERCC3-209ENST00000494464 OR11H4Q8NGC9 324 aa10.48□□□□□ -0.73
ERCC3-209ENST00000494464 COQ8AQ8NI60 647 aa10.48□□□□□ -0.73
ERCC3-209ENST00000494464 RTN4IP1Q8WWV3 396 aaPredicted RBP10.48□□□□□ -0.73
ERCC3-209ENST00000494464 CABLES2Q9BTV7 478 aa10.48□□□□□ -0.73
ERCC3-209ENST00000494464 TAF9BQ9HBM6 251 aa10.48□□□□□ -0.73
ERCC3-209ENST00000494464 JPT1Q9UK76 154 aa10.48□□□□□ -0.73
ERCC3-209ENST00000494464 SLC31A2O15432 143 aa10.47□□□□□ -0.73
ERCC3-209ENST00000494464 DIRAS3O95661 229 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms