RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 GSX2Q9BZM3 304 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.53□□□□□ -1.52
MSH5-217ENST00000494458 LYRM2Q9NU23 88 aaPredicted RBP5.53□□□□□ -1.52
MSH5-217ENST00000494458 MED9Q9NWA0 146 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 KCNS2Q9ULS6 477 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 WSB1Q9Y6I7 421 aa5.53□□□□□ -1.52
MSH5-217ENST00000494458 PPIAL4CA0A0B4J2A2 164 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 MARCH11A6NNE9 402 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 INS-IGF2F8WCM5 200 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 M0R1X1 148 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 NDUFS8O00217 210 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 TXNL1O43396 289 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 PPIHO43447 177 aaKnown RBP5.52□□□□□ -1.53
MSH5-217ENST00000494458 SYNGR2O43760 224 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 CHST1O43916 411 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 TSC22D2O75157 780 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 S1PR2O95136 353 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 IGHV4-39P01824 125 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 LIPFP07098 398 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 FAM157CP0CG43 387 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 PPIAL4GP0DN37 164 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 RRASP10301 218 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 NQO2P16083 231 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 PRTN3P24158 256 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 GPR6P46095 362 aaPredicted RBP5.52□□□□□ -1.53
MSH5-217ENST00000494458 POLR2GP62487 172 aaKnown RBP eCLIP5.52□□□□□ -1.53
MSH5-217ENST00000494458 UBA52P62987 128 aaKnown RBP5.52□□□□□ -1.53
MSH5-217ENST00000494458 TNFRSF9Q07011 255 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 LTC4SQ16873 150 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 AVPI1Q5T686 147 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 SP5Q6BEB4 398 aaPredicted RBP5.52□□□□□ -1.53
MSH5-217ENST00000494458 HCP5Q6MZN7 132 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 BTNL3Q6UXE8 466 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 ABHD12Q8N2K0 398 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 OR2C3Q8N628 320 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 TMEM252Q8N6L7 170 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 OR8H1Q8NGG4 311 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 OR4S2Q8NH73 311 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 SCARB1Q8WTV0 552 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 TCTEX1D2Q8WW35 142 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 ST8SIA2Q92186 375 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 LEAP2Q969E1 77 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 C1orf159Q96HA4 380 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 NABP2Q9BQ15 211 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 HIPK2Q9H2X6 1198 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 UBTD1Q9HAC8 227 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 CACNG5Q9UF02 275 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 PRELID3BQ9Y3B1 194 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 MYO18BQ8IUG5 2567 aa5.52□□□□□ -1.53
MSH5-217ENST00000494458 SPTAN1Q13813 2472 aaKnown RBP5.51□□□□□ -1.53
MSH5-217ENST00000494458 LOC105371242A0A075B767 164 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 IGHV2-26A0A0B4J1V2 119 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 A0A1W2PPE3 182 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 KANTRA0A1W2PQU2 76 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 SRRM4A7MD48 611 aaKnown RBP5.51□□□□□ -1.53
MSH5-217ENST00000494458 PMS2P5A8MQ11 134 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 ODF3BA8MYP8 253 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 H0YJW9 148 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 FGF16O43320 207 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 KCNAB3O43448 404 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 JTBO76095 146 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 KRASP01116 189 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 NFYBP25208 207 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 ZFP36P26651 326 aaKnown RBP5.51□□□□□ -1.53
MSH5-217ENST00000494458 G6PCP35575 357 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 AP2S1P53680 142 aaPredicted RBP5.51□□□□□ -1.53
MSH5-217ENST00000494458 UBE2KP61086 200 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 RELBQ01201 579 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 BAXQ07812 192 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 ZNF816Q0VGE8 651 aaPredicted RBP5.51□□□□□ -1.53
MSH5-217ENST00000494458 IZUMO4Q1ZYL8 232 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 HLA-DRB5Q30154 266 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 THOC7Q6I9Y2 204 aaKnown RBP5.51□□□□□ -1.53
MSH5-217ENST00000494458 TMEM14EPQ6UXP3 125 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 BAP18Q8IXM2 172 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 LYG1Q8N1E2 194 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 OR4P4Q8NGL7 312 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 OSR1Q8TAX0 266 aaPredicted RBP5.51□□□□□ -1.53
MSH5-217ENST00000494458 C10orf105Q8TEF2 133 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 H1FXQ92522 213 aaKnown RBP5.51□□□□□ -1.53
MSH5-217ENST00000494458 R3HDM4Q96D70 268 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 BSCL2Q96G97 398 aaPredicted RBP5.51□□□□□ -1.53
MSH5-217ENST00000494458 PSMG3-AS1Q96PY0 264 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 RNF5Q99942 180 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 AIFM2Q9BRQ8 373 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 SSBP3Q9BWW4 388 aaPredicted RBP5.51□□□□□ -1.53
MSH5-217ENST00000494458 CLEC7AQ9BXN2 247 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 PARD6GQ9BYG4 376 aaPredicted RBP5.51□□□□□ -1.53
MSH5-217ENST00000494458 SLC25A32Q9H2D1 315 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 WFDC1Q9HC57 220 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 TMEM14BQ9NUH8 114 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 BET1LQ9NYM9 111 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 UBQLN2Q9UHD9 624 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 LSM5Q9Y4Y9 91 aaKnown RBP5.51□□□□□ -1.53
MSH5-217ENST00000494458 KPTNQ9Y664 436 aa5.51□□□□□ -1.53
MSH5-217ENST00000494458 CHD6Q8TD26 2715 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 hCG_1809904A0A1W2PP81 198 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 A0A1W2PPE2 198 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 A0A1W2PR64 198 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 A0A1W2PRV1 198 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms