RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 C1orf195Q5TG92 126 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 UNQ9165/PRO28630Q6UXU0 137 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 Q6ZRU5 148 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 MIR7-3HGQ8N6C7 128 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 TMEM161BQ8NDZ6 487 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 OR9I1Q8NGQ6 314 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 OR2K2Q8NGT1 345 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 JOSD2Q8TAC2 188 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 ITLN2Q8WWU7 325 aaPredicted RBP2.79□□□□□ -1.96
GTF3A-208ENST00000493903 YIPF5Q969M3 257 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 IMP4Q96G21 291 aaKnown RBP2.79□□□□□ -1.96
GTF3A-208ENST00000493903 REEP6Q96HR9 211 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 IP6K3Q96PC2 410 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 HES4Q9HCC6 221 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 NYAP2Q9P242 653 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 DKKL1Q9UK85 242 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 LSM5Q9Y4Y9 91 aaKnown RBP2.79□□□□□ -1.96
GTF3A-208ENST00000493903 NACAE9PAV3 2078 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 KMT2EQ8IZD2 1858 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 DCHS1Q96JQ0 3298 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 BRWD1Q9NSI6 2320 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 ZFHX4Q86UP3 3567 aa2.79□□□□□ -1.96
GTF3A-208ENST00000493903 C5orf42Q9H799 3197 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 MYO15AQ9UKN7 3530 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 KPNA3O00505 521 aaPredicted RBP2.78□□□□□ -1.96
GTF3A-208ENST00000493903 KCNK2O95069 426 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 CDRT1O95170 752 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 LTAP01374 205 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 OR4A8P0C604 315 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 CXCL2P19875 107 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 CXCL3P19876 107 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 SULT1A1P50225 295 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 SULT1A2P50226 295 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 TCL1AP56279 114 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 RAB5BP61020 215 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 NAA20P61599 178 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 ARF6P62330 175 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 HPCAP84074 193 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 TSPAN31Q12999 210 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 TMED2Q15363 201 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 TRMT12Q53H54 448 aaKnown RBP2.78□□□□□ -1.96
GTF3A-208ENST00000493903 FAM71E1Q6IPT2 247 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 LCN8Q6JVE9 175 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 SLC51BQ86UW2 128 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 GID4Q8IVV7 300 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 Q8N9L7 120 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 OR5B17Q8NGF7 314 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 OR8S1Q8NH09 359 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 ZNRF2Q8NHG8 242 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 ASB17Q8WXJ9 295 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 C1orf50Q9BV19 199 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 GNB1LQ9BYB4 327 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 GTSF1LQ9H1H1 148 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 VCXQ9H320 206 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 XPNPEP1Q9NQW7 623 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 CELA1Q9UNI1 258 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 SLC22A7Q9Y694 548 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 MYO10Q9HD67 2058 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 PCM1Q15154 2024 aa2.78□□□□□ -1.96
GTF3A-208ENST00000493903 PTPRSQ13332 1948 aa2.78□□□□□ -1.97
GTF3A-208ENST00000493903 NAV1Q8NEY1 1877 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 TANC1Q9C0D5 1861 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 IGLV3-16A0A075B6K0 115 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 C5orf49A4QMS7 147 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 GOLGA6L4A6NEF3 574 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 ZNF850A8MQ14 1090 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 A8MU10 97 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 FBP1P09467 338 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 UCHL3P15374 230 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 CCR7P32248 378 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 PMELP40967 661 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 PSMB3P49720 205 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 RANP62826 216 aaKnown RBP2.77□□□□□ -1.97
GTF3A-208ENST00000493903 RPS24P62847 133 aaKnown RBP2.77□□□□□ -1.97
GTF3A-208ENST00000493903 FABP5Q01469 135 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 ENDOGQ14249 297 aaKnown RBP2.77□□□□□ -1.97
GTF3A-208ENST00000493903 BATFQ16520 125 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 LRRC75BQ2VPJ9 315 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 ZCWPW2Q504Y3 356 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 MESTQ5EB52 335 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 NAA40Q86UY6 237 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 NIT1Q86X76 327 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 ZFP82Q8N141 532 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 OR1P1Q8NH06 330 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 MFSD8Q8NHS3 518 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 EEF1AKMT1Q8WVE0 214 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 RTN4IP1Q8WWV3 396 aaPredicted RBP2.77□□□□□ -1.97
GTF3A-208ENST00000493903 FRZBQ92765 325 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 APOBEC3DQ96AK3 386 aaPredicted RBP2.77□□□□□ -1.97
GTF3A-208ENST00000493903 ACY3Q96HD9 319 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 PYURFQ96I23 114 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 C9orf16Q9BUW7 83 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 OR51I2Q9H344 312 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 INIPQ9NRY2 104 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.77□□□□□ -1.97
GTF3A-208ENST00000493903 TRIOO75962 3097 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 MYH1P12882 1939 aa2.77□□□□□ -1.97
GTF3A-208ENST00000493903 MYO5AQ9Y4I1 1855 aaKnown RBP2.77□□□□□ -1.97
GTF3A-208ENST00000493903 COL11A1P12107 1806 aaPredicted RBP2.77□□□□□ -1.97
GTF3A-208ENST00000493903 DMDP11532 3685 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms