RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 RHEBQ15382 184 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 ZNF674Q2M3X9 581 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 C3orf36Q3SXR2 165 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 AKR1C8PQ5T2L2 129 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 METRNQ9UJH8 293 aa11.53□□□□□ -0.56
VCP-207ENST00000493886 PIGBOS1A0A0B4J2F0 54 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 OOEPA6NGQ2 149 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 C12orf77C9JDV5 145 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 UBE2KP61086 200 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 ID3Q02535 119 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 LFNGQ8NES3 379 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 GALMQ96C23 342 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 VPS25Q9BRG1 176 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 RSG1Q9BU20 258 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 SLC25A31Q9H0C2 315 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 APC2O95996 2303 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 IGHV3-13P01766 116 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 GLRXP35754 106 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 GABRA2P47869 451 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 TDGF1P3P51864 188 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 NCR3LG1Q68D85 454 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 DIRC2Q96SL1 478 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 SSUH2Q9Y2M2 353 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 LAMA5O15230 3695 aa11.52□□□□□ -0.57
VCP-207ENST00000493886 BMP5P22003 454 aa11.51□□□□□ -0.57
VCP-207ENST00000493886 IL2RGP31785 369 aa11.51□□□□□ -0.57
VCP-207ENST00000493886 NKX6-1P78426 367 aaPredicted RBP11.51□□□□□ -0.57
VCP-207ENST00000493886 FAM27E3Q08E93 113 aa11.51□□□□□ -0.57
VCP-207ENST00000493886 OR5T1Q8NG75 326 aa11.51□□□□□ -0.57
VCP-207ENST00000493886 FAM216AQ8WUB2 273 aa11.51□□□□□ -0.57
VCP-207ENST00000493886 GPR146Q96CH1 333 aa11.51□□□□□ -0.57
VCP-207ENST00000493886 ACACAQ13085 2346 aa11.51□□□□□ -0.57
VCP-207ENST00000493886 ZFP92A6NM28 416 aa11.51□□□□□ -0.57
VCP-207ENST00000493886 HBZP02008 142 aa11.51□□□□□ -0.57
VCP-207ENST00000493886 KLF3P57682 345 aaPredicted RBP11.51□□□□□ -0.57
VCP-207ENST00000493886 SPACA3Q8IXA5 215 aa11.51□□□□□ -0.57
VCP-207ENST00000493886 DRAM1Q8N682 238 aa11.51□□□□□ -0.57
VCP-207ENST00000493886 MRGPRDQ8TDS7 321 aa11.51□□□□□ -0.57
VCP-207ENST00000493886 GNG13Q9P2W3 67 aa11.51□□□□□ -0.57
VCP-207ENST00000493886 WSB1Q9Y6I7 421 aa11.51□□□□□ -0.57
VCP-207ENST00000493886 IGKV1-39P01597 117 aa11.5□□□□□ -0.57
VCP-207ENST00000493886 IGKV1D-39P04432 117 aa11.5□□□□□ -0.57
VCP-207ENST00000493886 SRP19P09132 144 aaKnown RBP11.5□□□□□ -0.57
VCP-207ENST00000493886 EGR1P18146 543 aa11.5□□□□□ -0.57
VCP-207ENST00000493886 PAX9P55771 341 aa11.5□□□□□ -0.57
VCP-207ENST00000493886 RPL23AP62750 156 aaKnown RBP11.5□□□□□ -0.57
VCP-207ENST00000493886 DLK1P80370 383 aa11.5□□□□□ -0.57
VCP-207ENST00000493886 KIAA0141Q14154 515 aaPredicted RBP11.5□□□□□ -0.57
VCP-207ENST00000493886 ICAM4Q14773 271 aa11.5□□□□□ -0.57
VCP-207ENST00000493886 Q6ZRM9 215 aa11.5□□□□□ -0.57
VCP-207ENST00000493886 ZNF429Q86V71 674 aa11.5□□□□□ -0.57
VCP-207ENST00000493886 CD177Q8N6Q3 437 aa11.5□□□□□ -0.57
VCP-207ENST00000493886 VSIRQ9H7M9 311 aa11.5□□□□□ -0.57
VCP-207ENST00000493886 LIN7CQ9NUP9 197 aaKnown RBP11.5□□□□□ -0.57
VCP-207ENST00000493886 A0A1B0GU03 582 aa11.5□□□□□ -0.57
VCP-207ENST00000493886 CXCL1P09341 107 aa11.5□□□□□ -0.57
VCP-207ENST00000493886 STAG3L3P0CL85 134 aa11.5□□□□□ -0.57
VCP-207ENST00000493886 SLC25A6P12236 298 aa11.5□□□□□ -0.57
VCP-207ENST00000493886 GLIPR1P48060 266 aa11.5□□□□□ -0.57
VCP-207ENST00000493886 LCN15Q6UWW0 184 aa11.5□□□□□ -0.57
VCP-207ENST00000493886 CISD2Q8N5K1 135 aaKnown RBP11.5□□□□□ -0.57
VCP-207ENST00000493886 TPRX1Q8N7U7 411 aa11.5□□□□□ -0.57
VCP-207ENST00000493886 OR52L2PQ8NGH6 319 aa11.5□□□□□ -0.57
VCP-207ENST00000493886 ANKRD11Q6UB99 2663 aaPredicted RBP11.5□□□□□ -0.57
VCP-207ENST00000493886 SRRM5B3KS81 715 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 PRRG2O14669 202 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 METTL15P1P0C7V9 234 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 MMP9P14780 707 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 PRDX2P32119 198 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 UBE2G2P60604 165 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 C22orf34Q6ZV56 151 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 DOLPP1Q86YN1 238 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 OR2V2Q96R30 315 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 ELOVL1Q9BW60 279 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 SCNM1Q9BWG6 230 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 COL25A1Q9BXS0 654 aaPredicted RBP11.49□□□□□ -0.57
VCP-207ENST00000493886 TUBA4BQ9H853 241 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 KIAA1456Q9P272 454 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 CACNG5Q9UF02 275 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 ICE1Q9Y2F5 2266 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 TGIF2-C20orf24A0A0A6YYL0 155 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 ZNF585BQ52M93 769 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 FAM53AQ6NSI3 398 aaPredicted RBP11.49□□□□□ -0.57
VCP-207ENST00000493886 Q8NA96 180 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 Q8WTZ3 238 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 LSM10Q969L4 123 aaKnown RBP11.49□□□□□ -0.57
VCP-207ENST00000493886 RNF115Q9Y4L5 304 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 IGLV3-9A0A075B6K5 115 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 CFHR2P36980 270 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 NDUFA6P56556 154 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 ERVFRD-1P60508 538 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 RAB11AP62491 216 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 SPRNQ5BIV9 151 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 HEPN1Q6WQI6 88 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 ZNF295-AS1Q8N0V1 137 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 ZNF645Q8N7E2 425 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 OR13A1Q8NGR1 328 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 NINJ1Q92982 152 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 ATP5SQ99766 215 aa11.49□□□□□ -0.57
VCP-207ENST00000493886 ZNF665Q9H7R5 613 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms