RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 THRSPQ92748 146 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 GGHQ92820 318 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 FAM46BQ96A09 425 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 SDSLQ96GA7 329 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 CEP19Q96LK0 163 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 OPALINQ96PE5 141 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 OR5B12Q96R08 314 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 SDHCQ99643 169 aaPredicted RBP2.17□□□□□ -2.06
PTCD3-218ENST00000493430 NRIP2Q9BQI9 281 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 HDHD3Q9BSH5 251 aaPredicted RBP2.17□□□□□ -2.06
PTCD3-218ENST00000493430 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 YIPF3Q9GZM5 350 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 CHST5Q9GZS9 411 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 BANF2Q9H503 90 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 PLEKHA1Q9HB21 404 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 HES4Q9HCC6 221 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 FAM212BQ9NTI7 297 aaPredicted RBP2.17□□□□□ -2.06
PTCD3-218ENST00000493430 PAK1IP1Q9NWT1 392 aaPredicted RBP2.17□□□□□ -2.06
PTCD3-218ENST00000493430 CLN6Q9NWW5 311 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 ENPP5Q9UJA9 477 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 BAIAP2Q9UQB8 552 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 TRAV18A0A075B6X5 111 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 A0A0A6YYD4 124 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 IGHV2-26A0A0B4J1V2 119 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 A0A0U1RQV5 110 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 DAPL1A0PJW8 107 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 A6NDX4 124 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 METTL15A6NJ78 407 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 OR5B21A6NL26 309 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 TMEM210A6NLX4 147 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 H0YJX3 145 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 K7N7A8 449 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 ATP6V1G1O75348 118 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 SCGB2A1O75556 95 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 CIB2O75838 187 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 CLPXO76031 633 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 NDUFA7O95182 113 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 HMGN1P05114 100 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 CRYBA1P05813 215 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 HTR1AP08908 422 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 FBP1P09467 338 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 CD3GP09693 182 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 ZNF728P0DKX0 622 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 APELAP0DMC3 54 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 IGHV1-8P0DP01 117 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 ANXA8P13928 327 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 ZNF44P15621 663 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 MUC1P15941 1255 aaPredicted RBP2.16□□□□□ -2.06
PTCD3-218ENST00000493430 PCMT1P22061 227 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 PAX7P23759 505 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 CDK2P24941 298 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 MAP2K4P45985 399 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 GBX2P52951 348 aaPredicted RBP2.16□□□□□ -2.06
PTCD3-218ENST00000493430 AQP4P55087 323 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 CLDN12P56749 244 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 ACTR3P61158 418 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 RPS11P62280 158 aaKnown RBP eCLIP2.16□□□□□ -2.06
PTCD3-218ENST00000493430 ADARB1P78563 741 aaKnown RBP2.16□□□□□ -2.06
PTCD3-218ENST00000493430 IL5RAQ01344 420 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 SMIM21Q3B7S5 101 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 ABCA11PQ4W5N1 156 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 CLVS2Q5SYC1 327 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 DDI2Q5TDH0 399 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 C19orf35Q6ZS72 473 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 AHSA2Q719I0 299 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 FAM220AQ7Z4H9 259 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 EGFL6Q8IUX8 553 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 FAM58AQ8N1B3 248 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 DRAM1Q8N682 238 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 ZSCAN4Q8NAM6 433 aaPredicted RBP2.16□□□□□ -2.06
PTCD3-218ENST00000493430 TMEM104Q8NE00 496 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 OR56B1Q8NGI3 324 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 OR4D6Q8NGJ1 314 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 OR10Z1Q8NGY1 313 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 OR4F5Q8NH21 305 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 OR4K15Q8NH41 348 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 OR1L1Q8NH94 360 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 C8orf46Q8TAG6 207 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 NDNFQ8TB73 568 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 TNFAIP8L1Q8WVP5 186 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 MAFIPQ8WZ33 124 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 BORCS8Q96FH0 119 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 CENPNQ96H22 339 aaPredicted RBP2.16□□□□□ -2.06
PTCD3-218ENST00000493430 ZNF714Q96N38 554 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 RDH12Q96NR8 316 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 HSPB9Q9BQS6 159 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 NICN1Q9BSH3 213 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 TPPP3Q9BW30 176 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 MROQ9BYG7 248 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 ALX4Q9H161 411 aaPredicted RBP2.16□□□□□ -2.06
PTCD3-218ENST00000493430 RIMS4Q9H426 269 aaPredicted RBP2.16□□□□□ -2.06
PTCD3-218ENST00000493430 S100A14Q9HCY8 104 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 IMPAD1Q9NX62 359 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 CNOT2Q9NZN8 540 aaKnown RBP2.16□□□□□ -2.06
PTCD3-218ENST00000493430 KAAG1Q9UBP8 84 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 FBXO7Q9Y3I1 522 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 GMPPBQ9Y5P6 360 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 MPC1Q9Y5U8 109 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 KPTNQ9Y664 436 aa2.16□□□□□ -2.06
PTCD3-218ENST00000493430 HUWE1Q7Z6Z7 4374 aaKnown RBP2.15□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms