RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 FKBP11Q9NYL4 201 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 RNF24Q9Y225 148 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 LOC105371242A0A075B767 164 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 SIAH2O43255 324 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 CTAG2O75638 210 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 CST7O76096 145 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 OPN1MWP04001 364 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 OPN1MW2P0DN77 364 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 OPN1MW3P0DN78 364 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 SPANXN5Q5MJ07 72 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 COL5A1-AS1Q5SY13 56 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 RPL7L1Q6DKI1 246 aaKnown RBP3.78□□□□□ -1.8
TRA2B-215ENST00000492417 RHOVQ96L33 236 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 PECRQ9BY49 303 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 MAGT1Q9H0U3 335 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 C7orf69Q9H7B7 122 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 HEYLQ9NQ87 328 aaPredicted RBP3.78□□□□□ -1.8
TRA2B-215ENST00000492417 MTCH1Q9NZJ7 389 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 SHISA3A0PJX4 238 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 LINC00587B1AMM8 73 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 SOX15O60248 233 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 EIF3GO75821 320 aaKnown RBP eCLIP3.78□□□□□ -1.8
TRA2B-215ENST00000492417 ISG15P05161 165 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 PLA2G2AP14555 144 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 GALP22466 123 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 PPP1CCP36873 323 aaKnown RBP3.78□□□□□ -1.8
TRA2B-215ENST00000492417 MDH2P40926 338 aaKnown RBP3.78□□□□□ -1.8
TRA2B-215ENST00000492417 CD200P41217 278 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 AMTP48728 403 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 EFNA4P52798 201 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 RBM11P57052 281 aaKnown RBP3.78□□□□□ -1.8
TRA2B-215ENST00000492417 HLA-DRB3P79483 266 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 ZNF816Q0VGE8 651 aaPredicted RBP3.78□□□□□ -1.8
TRA2B-215ENST00000492417 PPP1R1AQ13522 171 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 RAB32Q13637 225 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 LY6EQ16553 131 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 Q5PR19 223 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 C11orf42Q8N5U0 333 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 GPX8Q8TED1 209 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 NEIL1Q96FI4 390 aaPredicted RBP3.78□□□□□ -1.8
TRA2B-215ENST00000492417 NOL4LQ96MY1 436 aaPredicted RBP3.78□□□□□ -1.8
TRA2B-215ENST00000492417 DUX5Q96PT3 197 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 ACTR3CQ9C0K3 210 aaPredicted RBP3.78□□□□□ -1.8
TRA2B-215ENST00000492417 GAL3ST2Q9H3Q3 398 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 RASL12Q9NYN1 266 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 OR6C3Q9NZP0 311 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 LPAR3Q9UBY5 353 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 PITPNC1Q9UKF7 332 aa3.78□□□□□ -1.8
TRA2B-215ENST00000492417 YTHDF2Q9Y5A9 579 aaKnown RBP3.78□□□□□ -1.8
TRA2B-215ENST00000492417 IGKV1-9A0A0C4DH69 117 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 TRBV5-5A0A0J9YX44 114 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 BMPR1BO00238 502 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 SSSCA1O60232 199 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 RNF224P0DH78 156 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 TMEM241Q24JQ0 296 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 PRAMEF5Q5TYX0 476 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 ARRDC1Q8N5I2 433 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 RTN4IP1Q8WWV3 396 aaPredicted RBP3.77□□□□□ -1.81
TRA2B-215ENST00000492417 Q96MF0 132 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 RIMS4Q9H426 269 aaPredicted RBP3.77□□□□□ -1.81
TRA2B-215ENST00000492417 PLEKHF2Q9H8W4 249 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 PAM16Q9Y3D7 125 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 DMRT1Q9Y5R6 373 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 A6NJY4 79 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 SERPINE3A8MV23 424 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 MFNGO00587 321 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 MLNRO43193 412 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 ZNF207O43670 478 aaKnown RBP3.77□□□□□ -1.81
TRA2B-215ENST00000492417 APELAP0DMC3 54 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 PSG2P11465 335 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 SLC25A4P12235 298 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 CCL3L1P16619 93 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 ZBTB25P24278 435 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 PMELP40967 661 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 GALR1P47211 349 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 TMEM33P57088 247 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 FGF12P61328 243 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 EFNB1P98172 346 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 NHLH2Q02577 135 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 SP6Q3SY56 376 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 PRSS54Q6PEW0 395 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 WDR82Q6UXN9 313 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 DPPA3Q6W0C5 159 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 C20orf204Q6ZNR8 217 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 ZDHHC22Q8N966 263 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 OR52L2PQ8NGH6 319 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 FBLIM1Q8WUP2 373 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 GHITMQ9H3K2 345 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 HEXA-AS1Q9H8Q6 139 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 FBXL17Q9UF56 701 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 WNK1Q9H4A3 2382 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 HELZ2Q9BYK8 2649 aaKnown RBP3.77□□□□□ -1.81
TRA2B-215ENST00000492417 DMXL2Q8TDJ6 3036 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 LOC102723971A0A1B0GUV8 181 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 CEACAM18A8MTB9 384 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 F8VVB4 439 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 F8VWA3 439 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 H3BP45 60 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 J3QW42 95 aa3.77□□□□□ -1.81
TRA2B-215ENST00000492417 MGST3O14880 152 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms