RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 PPP1R27Q86WC6 154 aa8.49□□□□□ -1.05
CLCNKA-206ENST00000491433 MRPS24Q96EL2 167 aaKnown RBP8.49□□□□□ -1.05
CLCNKA-206ENST00000491433 DIRAS2Q96HU8 199 aa8.49□□□□□ -1.05
CLCNKA-206ENST00000491433 FAM110AQ9BQ89 295 aa8.49□□□□□ -1.05
CLCNKA-206ENST00000491433 THAP7Q9BT49 309 aaPredicted RBP8.49□□□□□ -1.05
CLCNKA-206ENST00000491433 TM2D1Q9BX74 207 aa8.49□□□□□ -1.05
CLCNKA-206ENST00000491433 SRRQ9GZT4 340 aa8.49□□□□□ -1.05
CLCNKA-206ENST00000491433 RETNQ9HD89 108 aa8.49□□□□□ -1.05
CLCNKA-206ENST00000491433 RHBDL2Q9NX52 303 aa8.49□□□□□ -1.05
CLCNKA-206ENST00000491433 SLC2A8Q9NY64 477 aa8.49□□□□□ -1.05
CLCNKA-206ENST00000491433 ETAA1Q9NY74 926 aa8.49□□□□□ -1.05
CLCNKA-206ENST00000491433 ADAM30Q9UKF2 790 aa8.49□□□□□ -1.05
CLCNKA-206ENST00000491433 RAB22AQ9UL26 194 aa8.49□□□□□ -1.05
CLCNKA-206ENST00000491433 TRAPPC2LQ9UL33 140 aa8.49□□□□□ -1.05
CLCNKA-206ENST00000491433 H3BUA1 57 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 RAB27BO00194 218 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 RRHO14718 337 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 XRCC3O43542 346 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 ZNF780AO75290 641 aaPredicted RBP8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 TRGV3P03979 118 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 CX3CL1P78423 397 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 KLF5Q13887 457 aaPredicted RBP8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 GPR176Q14439 515 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 GLIPR1L1Q6UWM5 242 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 OR10V1Q8NGI7 309 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 OR10K1Q8NGX5 313 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 KCNG3Q8TAE7 436 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 UBALD1Q8TB05 177 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 S100A16Q96FQ6 103 aaKnown RBP8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 MS4A10Q96PG2 267 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 ABHD1Q96SE0 405 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 NABP2Q9BQ15 211 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 ABHD14AQ9BUJ0 271 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 LPAR5Q9H1C0 372 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 OR2S2Q9NQN1 319 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 PEMTQ9UBM1 199 aa8.48□□□□□ -1.05
CLCNKA-206ENST00000491433 FABP12A6NFH5 140 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 MCRIP1C9JLW8 97 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 GEMIN2O14893 280 aaKnown RBP8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 GSTZ1O43708 216 aaPredicted RBP8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 CA11O75493 328 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 RBBP9O75884 186 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 HBZP02008 142 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 CD81P60033 236 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 RPS27AP62979 156 aaKnown RBP8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 NDPQ00604 133 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 IFITM3Q01628 133 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 MORN2Q502X0 79 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 SPANXN2Q5MJ10 180 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 FAM71F2Q6NXP2 309 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 ZNF554Q86TJ5 538 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 PRR18Q8N4B5 295 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 RPP25LQ8N5L8 163 aaKnown RBP8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 GDPD1Q8N9F7 314 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 CASTOR1Q8WTX7 329 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 BORCS5Q969J3 196 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 MRPL20Q9BYC9 149 aaKnown RBP8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 KCNK15Q9H427 330 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 PLEKHA3Q9HB20 300 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 ZNF355PQ9NSJ1 428 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 KCNIP1Q9NZI2 227 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 EXTL2Q9UBQ6 330 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 ING4Q9UNL4 249 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 KLK5Q9Y337 293 aaPredicted RBP8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 FBXO7Q9Y3I1 522 aa8.47□□□□□ -1.05
CLCNKA-206ENST00000491433 A0A0A6YYD4 124 aa8.46□□□□□ -1.06
CLCNKA-206ENST00000491433 A0A1W2PP11 408 aa8.46□□□□□ -1.06
CLCNKA-206ENST00000491433 CXorf65A6NEN9 183 aa8.46□□□□□ -1.06
CLCNKA-206ENST00000491433 GTF2F2P13984 249 aa8.46□□□□□ -1.06
CLCNKA-206ENST00000491433 AADACP22760 399 aa8.46□□□□□ -1.06
CLCNKA-206ENST00000491433 MC5RP33032 325 aa8.46□□□□□ -1.06
CLCNKA-206ENST00000491433 TMEM50BP56557 158 aa8.46□□□□□ -1.06
CLCNKA-206ENST00000491433 LY6G6FQ5SQ64 297 aa8.46□□□□□ -1.06
CLCNKA-206ENST00000491433 AWAT2Q6E213 333 aa8.46□□□□□ -1.06
CLCNKA-206ENST00000491433 OR10K2Q6IF99 312 aa8.46□□□□□ -1.06
CLCNKA-206ENST00000491433 ZNF562Q6V9R5 426 aa8.46□□□□□ -1.06
CLCNKA-206ENST00000491433 RITA1Q96K30 269 aa8.46□□□□□ -1.06
CLCNKA-206ENST00000491433 Q96M66 194 aa8.46□□□□□ -1.06
CLCNKA-206ENST00000491433 RNF5Q99942 180 aa8.46□□□□□ -1.06
CLCNKA-206ENST00000491433 NEURL2Q9BR09 285 aa8.46□□□□□ -1.06
CLCNKA-206ENST00000491433 CCDC32Q9BV29 185 aa8.46□□□□□ -1.06
CLCNKA-206ENST00000491433 FBXL15Q9H469 300 aa8.46□□□□□ -1.06
CLCNKA-206ENST00000491433 JPT1Q9UK76 154 aa8.46□□□□□ -1.06
CLCNKA-206ENST00000491433 DNAH10Q8IVF4 4471 aa8.45□□□□□ -1.06
CLCNKA-206ENST00000491433 OR5H14A6NHG9 310 aa8.45□□□□□ -1.06
CLCNKA-206ENST00000491433 FAM90A7PA6NKC0 464 aa8.45□□□□□ -1.06
CLCNKA-206ENST00000491433 FAM90A23PA8MXZ1 464 aa8.45□□□□□ -1.06
CLCNKA-206ENST00000491433 FAM25AB3EWG3 89 aa8.45□□□□□ -1.06
CLCNKA-206ENST00000491433 FAM25CB3EWG5 89 aa8.45□□□□□ -1.06
CLCNKA-206ENST00000491433 FAM25GB3EWG6 89 aa8.45□□□□□ -1.06
CLCNKA-206ENST00000491433 J3QRK9 145 aa8.45□□□□□ -1.06
CLCNKA-206ENST00000491433 YPEL1O60688 119 aa8.45□□□□□ -1.06
CLCNKA-206ENST00000491433 SCGNO76038 276 aa8.45□□□□□ -1.06
CLCNKA-206ENST00000491433 OR2A4O95047 310 aa8.45□□□□□ -1.06
CLCNKA-206ENST00000491433 GSTP1P09211 210 aaKnown RBP8.45□□□□□ -1.06
CLCNKA-206ENST00000491433 EGR2P11161 476 aaPredicted RBP8.45□□□□□ -1.06
CLCNKA-206ENST00000491433 MGMTP16455 207 aa8.45□□□□□ -1.06
CLCNKA-206ENST00000491433 SERPINA2P20848 420 aa8.45□□□□□ -1.06
CLCNKA-206ENST00000491433 SYNJ2BPP57105 145 aa8.45□□□□□ -1.06
CLCNKA-206ENST00000491433 HTD2P86397 168 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms