RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 CMTM3Q96MX0 182 aa12.89□□□□□ -0.35
PDLIM2-217ENST00000491330 OR4C12Q96R67 309 aa12.89□□□□□ -0.35
PDLIM2-217ENST00000491330 PHB2Q99623 299 aa12.89□□□□□ -0.35
PDLIM2-217ENST00000491330 DCUN1D5Q9BTE7 237 aa12.89□□□□□ -0.35
PDLIM2-217ENST00000491330 ZNF256Q9Y2P7 627 aaPredicted RBP12.89□□□□□ -0.35
PDLIM2-217ENST00000491330 MRPS7Q9Y2R9 242 aaKnown RBP12.89□□□□□ -0.35
PDLIM2-217ENST00000491330 A0A0B4J203 849 aa12.88□□□□□ -0.35
PDLIM2-217ENST00000491330 IGKV1-6A0A0C4DH72 117 aa12.88□□□□□ -0.35
PDLIM2-217ENST00000491330 SAP30O75446 220 aa12.88□□□□□ -0.35
PDLIM2-217ENST00000491330 IGKV1-16P04430 117 aa12.88□□□□□ -0.35
PDLIM2-217ENST00000491330 HSPB1P04792 205 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-217ENST00000491330 SNRPBP14678 240 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-217ENST00000491330 ZP3P21754 424 aa12.88□□□□□ -0.35
PDLIM2-217ENST00000491330 CBX5P45973 191 aa12.88□□□□□ -0.35
PDLIM2-217ENST00000491330 CNIH2Q6PI25 160 aa12.88□□□□□ -0.35
PDLIM2-217ENST00000491330 CYYR1Q96J86 154 aa12.88□□□□□ -0.35
PDLIM2-217ENST00000491330 MS4A10Q96PG2 267 aa12.88□□□□□ -0.35
PDLIM2-217ENST00000491330 GNB4Q9HAV0 340 aa12.88□□□□□ -0.35
PDLIM2-217ENST00000491330 RANGRFQ9HD47 186 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-217ENST00000491330 SDHAF2Q9NX18 166 aa12.88□□□□□ -0.35
PDLIM2-217ENST00000491330 ZNF230Q9UIE0 474 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-217ENST00000491330 FCN1O00602 326 aa12.87□□□□□ -0.35
PDLIM2-217ENST00000491330 MPPED1O15442 326 aa12.87□□□□□ -0.35
PDLIM2-217ENST00000491330 AADACP22760 399 aa12.87□□□□□ -0.35
PDLIM2-217ENST00000491330 POC5Q8NA72 575 aa12.87□□□□□ -0.35
PDLIM2-217ENST00000491330 BVESQ8NE79 360 aa12.87□□□□□ -0.35
PDLIM2-217ENST00000491330 OR6Q1Q8NGQ2 317 aa12.87□□□□□ -0.35
PDLIM2-217ENST00000491330 OSR1Q8TAX0 266 aaPredicted RBP12.87□□□□□ -0.35
PDLIM2-217ENST00000491330 S100A16Q96FQ6 103 aaKnown RBP12.87□□□□□ -0.35
PDLIM2-217ENST00000491330 FAM103A1Q9BTL3 118 aaKnown RBP12.87□□□□□ -0.35
PDLIM2-217ENST00000491330 SMIM30A4D0T7 59 aa12.86□□□□□ -0.35
PDLIM2-217ENST00000491330 ARPC4P59998 168 aa12.86□□□□□ -0.35
PDLIM2-217ENST00000491330 TMEM177Q53S58 311 aa12.86□□□□□ -0.35
PDLIM2-217ENST00000491330 UBE2NLQ5JXB2 153 aa12.86□□□□□ -0.35
PDLIM2-217ENST00000491330 H1FOOQ8IZA3 346 aaPredicted RBP12.86□□□□□ -0.35
PDLIM2-217ENST00000491330 TEX45Q8NA69 505 aa12.86□□□□□ -0.35
PDLIM2-217ENST00000491330 OR13F1Q8NGS4 319 aa12.86□□□□□ -0.35
PDLIM2-217ENST00000491330 ACOT12Q8WYK0 555 aa12.86□□□□□ -0.35
PDLIM2-217ENST00000491330 MAFIPQ8WZ33 124 aa12.86□□□□□ -0.35
PDLIM2-217ENST00000491330 DCUN1D4Q92564 292 aa12.86□□□□□ -0.35
PDLIM2-217ENST00000491330 SLC25A46Q96AG3 418 aa12.86□□□□□ -0.35
PDLIM2-217ENST00000491330 RBMXL1Q96E39 390 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-217ENST00000491330 AIFM2Q9BRQ8 373 aa12.86□□□□□ -0.35
PDLIM2-217ENST00000491330 NDPQ00604 133 aa12.85□□□□□ -0.35
PDLIM2-217ENST00000491330 MSMO1Q15800 293 aa12.85□□□□□ -0.35
PDLIM2-217ENST00000491330 VSTM2AQ8TAG5 236 aa12.85□□□□□ -0.35
PDLIM2-217ENST00000491330 SLC25A38Q96DW6 304 aa12.85□□□□□ -0.35
PDLIM2-217ENST00000491330 FUNDC2Q9BWH2 189 aa12.85□□□□□ -0.35
PDLIM2-217ENST00000491330 RNF167Q9H6Y7 350 aa12.85□□□□□ -0.35
PDLIM2-217ENST00000491330 ANXA10Q9UJ72 324 aa12.85□□□□□ -0.35
PDLIM2-217ENST00000491330 OR2W1Q9Y3N9 320 aa12.85□□□□□ -0.35
PDLIM2-217ENST00000491330 TMEM235A6NFC5 223 aa12.84□□□□□ -0.35
PDLIM2-217ENST00000491330 XRCC3O43542 346 aa12.84□□□□□ -0.35
PDLIM2-217ENST00000491330 PROP1O75360 226 aa12.84□□□□□ -0.35
PDLIM2-217ENST00000491330 IGHV3-11P01762 117 aa12.84□□□□□ -0.35
PDLIM2-217ENST00000491330 CLEC2LP0C7M8 214 aa12.84□□□□□ -0.35
PDLIM2-217ENST00000491330 UBE2KP61086 200 aa12.84□□□□□ -0.35
PDLIM2-217ENST00000491330 KIAA0141Q14154 515 aaPredicted RBP12.84□□□□□ -0.35
PDLIM2-217ENST00000491330 ZNF645Q8N7E2 425 aa12.84□□□□□ -0.35
PDLIM2-217ENST00000491330 OR5T1Q8NG75 326 aa12.84□□□□□ -0.35
PDLIM2-217ENST00000491330 USMG5Q96IX5 58 aa12.84□□□□□ -0.35
PDLIM2-217ENST00000491330 PRR25Q96S07 402 aa12.84□□□□□ -0.35
PDLIM2-217ENST00000491330 MRPS26Q9BYN8 205 aaKnown RBP12.84□□□□□ -0.35
PDLIM2-217ENST00000491330 COA4Q9NYJ1 87 aa12.84□□□□□ -0.35
PDLIM2-217ENST00000491330 FBXO7Q9Y3I1 522 aa12.84□□□□□ -0.35
PDLIM2-217ENST00000491330 SMAD5-AS1Q9Y6J3 95 aa12.84□□□□□ -0.35
PDLIM2-217ENST00000491330 SOX15O60248 233 aa12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 TUSC2O75896 110 aa12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 CRYZL1O95825 349 aa12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 HLA-DQB1P01920 261 aa12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 EGR2P11161 476 aaPredicted RBP12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 DUTP33316 252 aaKnown RBP12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 RPS19P39019 145 aaKnown RBP12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 TNXAQ16473 311 aa12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 C19orf54Q5BKX5 351 aa12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 FAM209BQ5JX69 171 aa12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 KCTD9Q7L273 389 aa12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 SLC25A42Q86VD7 318 aa12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 ANKRD13BQ86YJ7 626 aa12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 OR5H6Q8NGV6 325 aa12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 AP3S1Q92572 193 aa12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 DLX4Q92988 240 aaPredicted RBP12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 BORCS5Q969J3 196 aa12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 RHOVQ96L33 236 aa12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 HSD17B10Q99714 261 aaKnown RBP12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 SPIN2AQ99865 258 aa12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 SPIN2BQ9BPZ2 258 aa12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 AUNIPQ9H7T9 357 aa12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 SCOCQ9UIL1 159 aa12.83□□□□□ -0.36
PDLIM2-217ENST00000491330 TRAV18A0A075B6X5 111 aa12.82□□□□□ -0.36
PDLIM2-217ENST00000491330 J3QRK9 145 aa12.82□□□□□ -0.36
PDLIM2-217ENST00000491330 HOGA1Q86XE5 327 aa12.82□□□□□ -0.36
PDLIM2-217ENST00000491330 MMD2Q8IY49 270 aa12.82□□□□□ -0.36
PDLIM2-217ENST00000491330 BEST4Q8NFU0 473 aa12.82□□□□□ -0.36
PDLIM2-217ENST00000491330 CASTOR1Q8WTX7 329 aa12.82□□□□□ -0.36
PDLIM2-217ENST00000491330 NUDCD2Q8WVJ2 157 aa12.82□□□□□ -0.36
PDLIM2-217ENST00000491330 IGHV4OR15-8A0A075B7B6 117 aa12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 A0A087WW49 117 aa12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 DPPA5A6NC42 116 aa12.81□□□□□ -0.36
PDLIM2-217ENST00000491330 MSGN1A6NI15 193 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms