RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 TAGLNQ01995 201 aaKnown RBP13.88□□□□□ -0.19
HMGN1-219ENST00000491183 SFXN4Q6P4A7 337 aa13.88□□□□□ -0.19
HMGN1-219ENST00000491183 OR5T1Q8NG75 326 aa13.88□□□□□ -0.19
HMGN1-219ENST00000491183 HARBI1Q96MB7 349 aa13.88□□□□□ -0.19
HMGN1-219ENST00000491183 CENPOQ9BU64 300 aa13.88□□□□□ -0.19
HMGN1-219ENST00000491183 ZNF256Q9Y2P7 627 aaPredicted RBP13.88□□□□□ -0.19
HMGN1-219ENST00000491183 TMEM235A6NFC5 223 aa13.87□□□□□ -0.19
HMGN1-219ENST00000491183 LINC00473A8K010 186 aa13.87□□□□□ -0.19
HMGN1-219ENST00000491183 J3QRK9 145 aa13.87□□□□□ -0.19
HMGN1-219ENST00000491183 SHOXO15266 292 aa13.87□□□□□ -0.19
HMGN1-219ENST00000491183 CNIH1O95406 144 aa13.87□□□□□ -0.19
HMGN1-219ENST00000491183 HSPB1P04792 205 aaKnown RBP13.87□□□□□ -0.19
HMGN1-219ENST00000491183 ZNF429Q86V71 674 aa13.87□□□□□ -0.19
HMGN1-219ENST00000491183 LGALS14Q8TCE9 139 aa13.87□□□□□ -0.19
HMGN1-219ENST00000491183 NUDCD2Q8WVJ2 157 aa13.87□□□□□ -0.19
HMGN1-219ENST00000491183 DCSTAMPQ9H295 470 aa13.87□□□□□ -0.19
HMGN1-219ENST00000491183 SLA2Q9H6Q3 261 aa13.87□□□□□ -0.19
HMGN1-219ENST00000491183 SSX5O60225 188 aa13.86□□□□□ -0.19
HMGN1-219ENST00000491183 TRGV3P03979 118 aa13.86□□□□□ -0.19
HMGN1-219ENST00000491183 RRASP10301 218 aa13.86□□□□□ -0.19
HMGN1-219ENST00000491183 CD40LGP29965 261 aa13.86□□□□□ -0.19
HMGN1-219ENST00000491183 MXD1Q05195 221 aa13.86□□□□□ -0.19
HMGN1-219ENST00000491183 RTL8BQ17RB0 113 aa13.86□□□□□ -0.19
HMGN1-219ENST00000491183 POC5Q8NA72 575 aa13.86□□□□□ -0.19
HMGN1-219ENST00000491183 ADTRPQ96IZ2 230 aa13.86□□□□□ -0.19
HMGN1-219ENST00000491183 SORL1Q92673 2214 aa13.86□□□□□ -0.19
HMGN1-219ENST00000491183 HLA-DQB1P01920 261 aa13.85□□□□□ -0.19
HMGN1-219ENST00000491183 CTXN2P0C2S0 81 aa13.85□□□□□ -0.19
HMGN1-219ENST00000491183 NFYAP23511 347 aaPredicted RBP13.85□□□□□ -0.19
HMGN1-219ENST00000491183 PITPNAQ00169 270 aa13.85□□□□□ -0.19
HMGN1-219ENST00000491183 CBX3Q13185 183 aa13.85□□□□□ -0.19
HMGN1-219ENST00000491183 ACSM6Q6P461 480 aa13.85□□□□□ -0.19
HMGN1-219ENST00000491183 OR5H6Q8NGV6 325 aa13.85□□□□□ -0.19
HMGN1-219ENST00000491183 ZNF355PQ9NSJ1 428 aa13.85□□□□□ -0.19
HMGN1-219ENST00000491183 OR2W1Q9Y3N9 320 aa13.85□□□□□ -0.19
HMGN1-219ENST00000491183 H3BUA1 57 aa13.84□□□□□ -0.19
HMGN1-219ENST00000491183 SAP30O75446 220 aa13.84□□□□□ -0.19
HMGN1-219ENST00000491183 CRYZL1O95825 349 aa13.84□□□□□ -0.19
HMGN1-219ENST00000491183 IGLV2-14P01704 120 aa13.84□□□□□ -0.19
HMGN1-219ENST00000491183 UBE2KP61086 200 aa13.84□□□□□ -0.19
HMGN1-219ENST00000491183 CNIH2Q6PI25 160 aa13.84□□□□□ -0.19
HMGN1-219ENST00000491183 ZNF645Q8N7E2 425 aa13.84□□□□□ -0.19
HMGN1-219ENST00000491183 TEX45Q8NA69 505 aa13.84□□□□□ -0.19
HMGN1-219ENST00000491183 RHBDL2Q9NX52 303 aa13.84□□□□□ -0.19
HMGN1-219ENST00000491183 TNCP24821 2201 aa13.84□□□□□ -0.19
HMGN1-219ENST00000491183 IGKV1D-13A0A0B4J2D9 117 aa13.83□□□□□ -0.2
HMGN1-219ENST00000491183 LOC100506127A0A0U1RQW1 187 aa13.83□□□□□ -0.2
HMGN1-219ENST00000491183 MSGN1A6NI15 193 aa13.83□□□□□ -0.2
HMGN1-219ENST00000491183 SCGNO76038 276 aa13.83□□□□□ -0.2
HMGN1-219ENST00000491183 BRI3O95415 125 aa13.83□□□□□ -0.2
HMGN1-219ENST00000491183 LY86O95711 162 aa13.83□□□□□ -0.2
HMGN1-219ENST00000491183 NHLRC4P0CG21 123 aaPredicted RBP13.83□□□□□ -0.2
HMGN1-219ENST00000491183 IGKV1-13P0DP09 117 aa13.83□□□□□ -0.2
HMGN1-219ENST00000491183 SPNP16150 400 aa13.83□□□□□ -0.2
HMGN1-219ENST00000491183 CD36P16671 472 aa13.83□□□□□ -0.2
HMGN1-219ENST00000491183 GNG2P59768 71 aa13.83□□□□□ -0.2
HMGN1-219ENST00000491183 RPL30P62888 115 aaKnown RBP13.83□□□□□ -0.2
HMGN1-219ENST00000491183 NEDD8Q15843 81 aa13.83□□□□□ -0.2
HMGN1-219ENST00000491183 PRSS8Q16651 343 aa13.83□□□□□ -0.2
HMGN1-219ENST00000491183 IDO2Q6ZQW0 420 aa13.83□□□□□ -0.2
HMGN1-219ENST00000491183 SLC25A38Q96DW6 304 aa13.83□□□□□ -0.2
HMGN1-219ENST00000491183 TMEM68Q96MH6 324 aa13.83□□□□□ -0.2
HMGN1-219ENST00000491183 ANXA10Q9UJ72 324 aa13.83□□□□□ -0.2
HMGN1-219ENST00000491183 APELAP0DMC3 54 aa13.82□□□□□ -0.2
HMGN1-219ENST00000491183 DEFA5Q01523 94 aa13.82□□□□□ -0.2
HMGN1-219ENST00000491183 VMA21Q3ZAQ7 101 aa13.82□□□□□ -0.2
HMGN1-219ENST00000491183 KCTD21Q4G0X4 260 aa13.82□□□□□ -0.2
HMGN1-219ENST00000491183 IDNKQ5T6J7 187 aa13.82□□□□□ -0.2
HMGN1-219ENST00000491183 OSR1Q8TAX0 266 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-219ENST00000491183 ASCL2Q99929 193 aa13.82□□□□□ -0.2
HMGN1-219ENST00000491183 TINAGL1Q9GZM7 467 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-219ENST00000491183 RBMX2Q9Y388 322 aaKnown RBP13.82□□□□□ -0.2
HMGN1-219ENST00000491183 TRAV18A0A075B6X5 111 aa13.81□□□□□ -0.2
HMGN1-219ENST00000491183 C13orf42A0A1B0GVH6 325 aa13.81□□□□□ -0.2
HMGN1-219ENST00000491183 ANKRD34BA5PLL1 514 aa13.81□□□□□ -0.2
HMGN1-219ENST00000491183 FCGR3BO75015 233 aa13.81□□□□□ -0.2
HMGN1-219ENST00000491183 RBMXL2O75526 392 aaKnown RBP13.81□□□□□ -0.2
HMGN1-219ENST00000491183 TUSC2O75896 110 aa13.81□□□□□ -0.2
HMGN1-219ENST00000491183 SCAND1P57086 179 aa13.81□□□□□ -0.2
HMGN1-219ENST00000491183 EIF4EBP1Q13541 118 aaPredicted RBP13.81□□□□□ -0.2
HMGN1-219ENST00000491183 TNXAQ16473 311 aa13.81□□□□□ -0.2
HMGN1-219ENST00000491183 RANGRFQ9HD47 186 aaPredicted RBP13.81□□□□□ -0.2
HMGN1-219ENST00000491183 ETV7Q9Y603 341 aa13.81□□□□□ -0.2
HMGN1-219ENST00000491183 A0A0G2JLM5 398 aa13.8□□□□□ -0.2
HMGN1-219ENST00000491183 SAA1P0DJI8 122 aaPredicted RBP13.8□□□□□ -0.2
HMGN1-219ENST00000491183 OR2B11Q5JQS5 317 aa13.8□□□□□ -0.2
HMGN1-219ENST00000491183 KCTD9Q7L273 389 aa13.8□□□□□ -0.2
HMGN1-219ENST00000491183 GVQW1Q8N7I0 195 aa13.8□□□□□ -0.2
HMGN1-219ENST00000491183 ADAD2Q8NCV1 583 aaKnown RBP13.8□□□□□ -0.2
HMGN1-219ENST00000491183 SRSF12Q8WXF0 261 aaKnown RBP13.8□□□□□ -0.2
HMGN1-219ENST00000491183 WWC2-AS2Q96NR7 200 aa13.8□□□□□ -0.2
HMGN1-219ENST00000491183 OR4C12Q96R67 309 aa13.8□□□□□ -0.2
HMGN1-219ENST00000491183 DCUN1D5Q9BTE7 237 aa13.8□□□□□ -0.2
HMGN1-219ENST00000491183 ZNF430Q9H8G1 570 aaPredicted RBP13.8□□□□□ -0.2
HMGN1-219ENST00000491183 SMAD5-AS1Q9Y6J3 95 aa13.8□□□□□ -0.2
HMGN1-219ENST00000491183 SLC22A5O76082 557 aa13.79□□□□□ -0.2
HMGN1-219ENST00000491183 PTHLHP12272 177 aa13.79□□□□□ -0.2
HMGN1-219ENST00000491183 GP9P14770 177 aa13.79□□□□□ -0.2
HMGN1-219ENST00000491183 AADACP22760 399 aa13.79□□□□□ -0.2
HMGN1-219ENST00000491183 BRWD1-AS2P59051 145 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms