RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 CAPSLQ8WWF8 208 aa14.97□□□□□ -0.01
MCF2L-230ENST00000491028 ZDHHC16Q969W1 377 aa14.97□□□□□ -0.01
MCF2L-230ENST00000491028 ZNF48Q96MX3 618 aaPredicted RBP14.97□□□□□ -0.01
MCF2L-230ENST00000491028 TP53RKQ96S44 253 aa14.97□□□□□ -0.01
MCF2L-230ENST00000491028 SSX3Q99909 188 aa14.97□□□□□ -0.01
MCF2L-230ENST00000491028 NAV3Q8IVL0 2385 aa14.96□□□□□ -0.01
MCF2L-230ENST00000491028 SFT2D2O95562 160 aa14.96□□□□□ -0.01
MCF2L-230ENST00000491028 IFNA2P01563 188 aa14.96□□□□□ -0.01
MCF2L-230ENST00000491028 HLA-AP01891 365 aaKnown RBP14.96□□□□□ -0.01
MCF2L-230ENST00000491028 SNRNP70P08621 437 aaKnown RBP14.96□□□□□ -0.01
MCF2L-230ENST00000491028 FAM106CPP0CH98 169 aa14.96□□□□□ -0.01
MCF2L-230ENST00000491028 RPA2P15927 270 aa14.96□□□□□ -0.01
MCF2L-230ENST00000491028 VAMP1P23763 118 aa14.96□□□□□ -0.01
MCF2L-230ENST00000491028 UCP1P25874 307 aa14.96□□□□□ -0.01
MCF2L-230ENST00000491028 BRWD1-AS2P59051 145 aa14.96□□□□□ -0.01
MCF2L-230ENST00000491028 C4orf46Q504U0 113 aa14.96□□□□□ -0.01
MCF2L-230ENST00000491028 LYG2Q86SG7 212 aa14.96□□□□□ -0.01
MCF2L-230ENST00000491028 OR4C13Q8NGP0 309 aa14.96□□□□□ -0.01
MCF2L-230ENST00000491028 OR2T10Q8NGZ9 312 aa14.96□□□□□ -0.01
MCF2L-230ENST00000491028 RNF5Q99942 180 aa14.96□□□□□ -0.01
MCF2L-230ENST00000491028 PIGBOS1A0A0B4J2F0 54 aa14.95□□□□□ -0.02
MCF2L-230ENST00000491028 C9orf170A2RU37 121 aa14.95□□□□□ -0.02
MCF2L-230ENST00000491028 CRLF1O75462 422 aa14.95□□□□□ -0.02
MCF2L-230ENST00000491028 HPRT1P00492 218 aa14.95□□□□□ -0.02
MCF2L-230ENST00000491028 MOSP00540 346 aa14.95□□□□□ -0.02
MCF2L-230ENST00000491028 IGKV1D-33P01593 117 aa14.95□□□□□ -0.02
MCF2L-230ENST00000491028 IGKV1-33P01594 117 aa14.95□□□□□ -0.02
MCF2L-230ENST00000491028 SERPINE2P07093 398 aa14.95□□□□□ -0.02
MCF2L-230ENST00000491028 RAB25P57735 213 aa14.95□□□□□ -0.02
MCF2L-230ENST00000491028 SRPXP78539 464 aa14.95□□□□□ -0.02
MCF2L-230ENST00000491028 TMEM177Q53S58 311 aa14.95□□□□□ -0.02
MCF2L-230ENST00000491028 OR5R1Q8NH85 324 aa14.95□□□□□ -0.02
MCF2L-230ENST00000491028 OSR1Q8TAX0 266 aaPredicted RBP14.95□□□□□ -0.02
MCF2L-230ENST00000491028 FLYWCH2Q96CP2 140 aaKnown RBP14.95□□□□□ -0.02
MCF2L-230ENST00000491028 TMEM222Q9H0R3 208 aa14.95□□□□□ -0.02
MCF2L-230ENST00000491028 PLEKHA2Q9HB19 425 aa14.95□□□□□ -0.02
MCF2L-230ENST00000491028 BEX1Q9HBH7 125 aa14.95□□□□□ -0.02
MCF2L-230ENST00000491028 COMMD9Q9P000 198 aa14.95□□□□□ -0.02
MCF2L-230ENST00000491028 BTBD17A6NE02 478 aa14.94□□□□□ -0.02
MCF2L-230ENST00000491028 H3BUX3 64 aa14.94□□□□□ -0.02
MCF2L-230ENST00000491028 RAMP3O60896 148 aa14.94□□□□□ -0.02
MCF2L-230ENST00000491028 CRYZL1O95825 349 aa14.94□□□□□ -0.02
MCF2L-230ENST00000491028 IGKV1-16P04430 117 aa14.94□□□□□ -0.02
MCF2L-230ENST00000491028 FAM157CP0CG43 387 aa14.94□□□□□ -0.02
MCF2L-230ENST00000491028 IER3P46695 156 aa14.94□□□□□ -0.02
MCF2L-230ENST00000491028 DHRS2Q13268 280 aa14.94□□□□□ -0.02
MCF2L-230ENST00000491028 HES1Q14469 280 aa14.94□□□□□ -0.02
MCF2L-230ENST00000491028 TMEM187Q14656 261 aa14.94□□□□□ -0.02
MCF2L-230ENST00000491028 SLC9A3R2Q15599 337 aa14.94□□□□□ -0.02
MCF2L-230ENST00000491028 ZNF585BQ52M93 769 aa14.94□□□□□ -0.02
MCF2L-230ENST00000491028 RBMS3Q6XE24 437 aaKnown RBP14.94□□□□□ -0.02
MCF2L-230ENST00000491028 PIFOQ8TCI5 191 aa14.94□□□□□ -0.02
MCF2L-230ENST00000491028 GLYATL2Q8WU03 294 aa14.94□□□□□ -0.02
MCF2L-230ENST00000491028 SSMEM1Q8WWF3 244 aa14.94□□□□□ -0.02
MCF2L-230ENST00000491028 GPN1Q9HCN4 374 aaPredicted RBP14.94□□□□□ -0.02
MCF2L-230ENST00000491028 PITPNC1Q9UKF7 332 aa14.94□□□□□ -0.02
MCF2L-230ENST00000491028 TCF19Q9Y242 345 aa14.94□□□□□ -0.02
MCF2L-230ENST00000491028 SONP18583 2426 aaKnown RBP14.93□□□□□ -0.02
MCF2L-230ENST00000491028 S1PR2O95136 353 aa14.93□□□□□ -0.02
MCF2L-230ENST00000491028 DUS4LO95620 317 aaKnown RBP14.93□□□□□ -0.02
MCF2L-230ENST00000491028 TMEM11P17152 192 aa14.93□□□□□ -0.02
MCF2L-230ENST00000491028 LPAR6P43657 344 aa14.93□□□□□ -0.02
MCF2L-230ENST00000491028 LGALS7P47929 136 aa14.93□□□□□ -0.02
MCF2L-230ENST00000491028 SP6Q3SY56 376 aa14.93□□□□□ -0.02
MCF2L-230ENST00000491028 LIAT1Q6ZQX7 453 aa14.93□□□□□ -0.02
MCF2L-230ENST00000491028 Q8N6K4 173 aa14.93□□□□□ -0.02
MCF2L-230ENST00000491028 SIGLECL1Q8N7X8 197 aa14.93□□□□□ -0.02
MCF2L-230ENST00000491028 OR8H1Q8NGG4 311 aa14.93□□□□□ -0.02
MCF2L-230ENST00000491028 ZNF431Q8TF32 576 aaPredicted RBP14.93□□□□□ -0.02
MCF2L-230ENST00000491028 IL22RA2Q969J5 263 aa14.93□□□□□ -0.02
MCF2L-230ENST00000491028 EAF1Q96JC9 268 aaPredicted RBP14.93□□□□□ -0.02
MCF2L-230ENST00000491028 HARBI1Q96MB7 349 aa14.93□□□□□ -0.02
MCF2L-230ENST00000491028 AIFM2Q9BRQ8 373 aa14.93□□□□□ -0.02
MCF2L-230ENST00000491028 POMT1Q9Y6A1 747 aa14.93□□□□□ -0.02
MCF2L-230ENST00000491028 SNRPGP15A8MWD9 76 aa14.92□□□□□ -0.02
MCF2L-230ENST00000491028 SHOXO15266 292 aa14.92□□□□□ -0.02
MCF2L-230ENST00000491028 ATG12O94817 140 aa14.92□□□□□ -0.02
MCF2L-230ENST00000491028 CDS2O95674 445 aa14.92□□□□□ -0.02
MCF2L-230ENST00000491028 HRASP01112 189 aa14.92□□□□□ -0.02
MCF2L-230ENST00000491028 IGHV4-59P01825 116 aa14.92□□□□□ -0.02
MCF2L-230ENST00000491028 CD24P25063 80 aa14.92□□□□□ -0.02
MCF2L-230ENST00000491028 RPS16P62249 146 aaKnown RBP14.92□□□□□ -0.02
MCF2L-230ENST00000491028 LGI3Q8N145 548 aa14.92□□□□□ -0.02
MCF2L-230ENST00000491028 TMEM86BQ8N661 226 aa14.92□□□□□ -0.02
MCF2L-230ENST00000491028 LRTM2Q8N967 370 aa14.92□□□□□ -0.02
MCF2L-230ENST00000491028 COQ8AQ8NI60 647 aa14.92□□□□□ -0.02
MCF2L-230ENST00000491028 CASTOR1Q8WTX7 329 aa14.92□□□□□ -0.02
MCF2L-230ENST00000491028 TMEM56Q96MV1 263 aa14.92□□□□□ -0.02
MCF2L-230ENST00000491028 TSNAXQ99598 290 aaKnown RBP14.92□□□□□ -0.02
MCF2L-230ENST00000491028 SEC22CQ9BRL7 303 aa14.92□□□□□ -0.02
MCF2L-230ENST00000491028 TMEM56-RWDD3S4R434 201 aa14.92□□□□□ -0.02
MCF2L-230ENST00000491028 ANK3Q12955 4377 aaKnown RBP14.91□□□□□ -0.02
MCF2L-230ENST00000491028 A0A0B4J2A0 478 aa14.91□□□□□ -0.02
MCF2L-230ENST00000491028 C7orf66A4D0T2 115 aa14.91□□□□□ -0.02
MCF2L-230ENST00000491028 A6NDX4 124 aa14.91□□□□□ -0.02
MCF2L-230ENST00000491028 CREBL2O60519 120 aaPredicted RBP14.91□□□□□ -0.02
MCF2L-230ENST00000491028 SPDEFO95238 335 aa14.91□□□□□ -0.02
MCF2L-230ENST00000491028 NQO2P16083 231 aa14.91□□□□□ -0.02
MCF2L-230ENST00000491028 POU2AF1Q16633 256 aa14.91□□□□□ -0.02
MCF2L-230ENST00000491028 TATDN3Q17R31 274 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms