RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 SEC14L6B5MCN3 397 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 PDCD5O14737 125 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 SLC25A17O43808 307 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 RBMXL2O75526 392 aaKnown RBP5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 PTHLHP12272 177 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 HIST1H1DP16402 221 aaKnown RBP5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 PSMA1P25786 263 aaKnown RBP5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 PSMB9P28065 219 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 TGFBR1P36897 503 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 CRIP2P52943 208 aaPredicted RBP5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 DGCR2P98153 550 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 PLGLAQ15195 96 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 CDNFQ49AH0 187 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 UBE2UQ5VVX9 321 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 FAM71F2Q6NXP2 309 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 TMEM65Q6PI78 240 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 UNQ5815/PRO19632Q6UWF5 114 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 MOB1BQ7L9L4 216 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 HAPLN4Q86UW8 402 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 OR4A4PQ8NGN8 299 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 OR5M8Q8NGP6 311 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 OR5H6Q8NGV6 325 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 ABHD5Q8WTS1 349 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 RHOVQ96L33 236 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 UBE2E2Q96LR5 201 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 MCRIP2Q9BUT9 160 aaKnown RBP5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 GON7Q9BXV9 100 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 ATG5Q9H1Y0 275 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 C12orf4Q9NQ89 552 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 SLC35D1Q9NTN3 355 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 NDUFB11Q9NX14 153 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 ZNF221Q9UK13 617 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 ZNF580Q9UK33 172 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 VSIG4Q9Y279 399 aa5.64□□□□□ -1.51
PRPF4B-208ENST00000490653 TNCP24821 2201 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 OR5H14A6NHG9 310 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 LINC00473A8K010 186 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 SSX5O60225 188 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 TFAP2AP05549 437 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 FCER2P06734 321 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 APELAP0DMC3 54 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 MYL9P24844 172 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 SLC6A1P30531 599 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 MC5RP33032 325 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 HSPA13P48723 471 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 PSMD7P51665 324 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 RPL30P62888 115 aaKnown RBP5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 RUNX1Q01196 453 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 MXD1Q05195 221 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 ZNF616Q08AN1 781 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 ARFRP1Q13795 201 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 FXYD3Q14802 87 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 C9orf66Q5T8R8 295 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 ZNF562Q6V9R5 426 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 FLYWCH2Q96CP2 140 aaKnown RBP5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 GPHA2Q96T91 129 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 CHCHD6Q9BRQ6 235 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 CABLES2Q9BTV7 478 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 ST6GALNAC5Q9BVH7 336 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 OR2D2Q9H210 308 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 VCX3BQ9H321 246 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 DAPK2Q9UIK4 370 aa5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 FOXA2Q9Y261 457 aaPredicted RBP5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 RRP15Q9Y3B9 282 aaKnown RBP5.63□□□□□ -1.51
PRPF4B-208ENST00000490653 SORL1Q92673 2214 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 IGKV1D-13A0A0B4J2D9 117 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 ANKRD34BA5PLL1 514 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 IGLV2-14P01704 120 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 OR5H8P0DN80 308 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 IGKV1-13P0DP09 117 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 NFYAP23511 347 aaPredicted RBP5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 GADD45AP24522 165 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 FGF9P31371 208 aaPredicted RBP5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 DUTP33316 252 aaKnown RBP5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 SDC2P34741 201 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 GABARAPL2P60520 117 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 TAGLNQ01995 201 aaKnown RBP5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 CD69Q07108 199 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 AKIRIN2Q53H80 203 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 ACTBL2Q562R1 376 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 H1FOOQ8IZA3 346 aaPredicted RBP5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 OR10J5Q8NHC4 309 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 GRPEL2Q8TAA5 225 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 NUDCD2Q8WVJ2 157 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 DDB2Q92466 427 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 DPF1Q92782 380 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 RNF5Q99942 180 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 B9D2Q9BPU9 175 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 BLOC1S6Q9UL45 172 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 MGAT4AQ9UM21 535 aa5.62□□□□□ -1.51
PRPF4B-208ENST00000490653 HYDINQ4G0P3 5121 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 TMEM235A6NFC5 223 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 E7EUB6 86 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 LINC01619G3V211 115 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 OVOL1O14753 267 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 MRPS14O60783 128 aaKnown RBP5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 RBBP9O75884 186 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 LY86O95711 162 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 TRBV12-3P01733 135 aa5.61□□□□□ -1.51
PRPF4B-208ENST00000490653 PRH1P02810 166 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms