RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 FOLR2P14207 255 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 MYL12AP19105 171 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 HTR2CP28335 458 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 RASSF2P50749 326 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 TAS2R43P59537 309 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 RHOGP84095 191 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 EWSR1Q01844 656 aaKnown RBP eCLIP6.13□□□□□ -1.43
USP39-216ENST00000490193 TAGLNQ01995 201 aaKnown RBP6.13□□□□□ -1.43
USP39-216ENST00000490193 PMS2P11Q13670 270 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 EXOSC2Q13868 293 aaKnown RBP6.13□□□□□ -1.43
USP39-216ENST00000490193 SMN1Q16637 294 aaKnown RBP6.13□□□□□ -1.43
USP39-216ENST00000490193 TMEM177Q53S58 311 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 C1orf100Q5SVJ3 147 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 SLC16A13Q7RTY0 426 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 SVIPQ8NHG7 77 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 KCNG3Q8TAE7 436 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 PYDC1Q8WXC3 89 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 HARBI1Q96MB7 349 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 TMEM59Q9BXS4 323 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 CHMP1AQ9HD42 196 aaPredicted RBP6.13□□□□□ -1.43
USP39-216ENST00000490193 AKIP1Q9NQ31 210 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 ZNF221Q9UK13 617 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 KLK5Q9Y337 293 aaPredicted RBP6.13□□□□□ -1.43
USP39-216ENST00000490193 DMRT1Q9Y5R6 373 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 VPS13DQ5THJ4 4388 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 LOC102724200A0A096LPH7 203 aaPredicted RBP6.12□□□□□ -1.43
USP39-216ENST00000490193 A0A0J9YWU9 116 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 MSGN1A6NI15 193 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 TMEM14DPA8MWL7 114 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 M0R1X1 148 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 TUSC2O75896 110 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 CD37P11049 281 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 MAPK3P27361 379 aaPredicted RBP6.12□□□□□ -1.43
USP39-216ENST00000490193 QRFPP83859 136 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 ZNF45Q02386 682 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 UNC119Q13432 240 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 GUCA2BQ16661 112 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 LGALS9CQ6DKI2 356 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 OR10K2Q6IF99 312 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 Q6ZWC4 215 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 ZFP41Q8N8Y5 198 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 TEX45Q8NA69 505 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 NECAP1Q8NC96 275 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 SETD6Q8TBK2 473 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 WDR89Q96FK6 387 aaPredicted RBP6.12□□□□□ -1.43
USP39-216ENST00000490193 NICN1Q9BSH3 213 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 Q9N2K0 584 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 CLEC2DQ9UHP7 191 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 HSF4Q9ULV5 492 aa6.12□□□□□ -1.43
USP39-216ENST00000490193 A0A0A6YYD4 124 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 IGKV1-6A0A0C4DH72 117 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 SRRM4A7MD48 611 aaKnown RBP6.11□□□□□ -1.43
USP39-216ENST00000490193 FOXI3A8MTJ6 420 aaPredicted RBP6.11□□□□□ -1.43
USP39-216ENST00000490193 A8MWP6 167 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 GGCTO75223 188 aaKnown RBP6.11□□□□□ -1.43
USP39-216ENST00000490193 CIB2O75838 187 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 ATP5HO75947 161 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 SCTP09683 121 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 RRASP10301 218 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 SRMP19623 302 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 EDN2P20800 178 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 CBLN1P23435 193 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 BMI1P35226 326 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 UBE2KP61086 200 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 ATP5G2Q06055 141 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 MED21Q13503 144 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 PRSS8Q16651 343 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 TTC23Q5W5X9 447 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 GLT8D1Q68CQ7 371 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 ZFP1Q6P2D0 407 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 LYG2Q86SG7 212 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 GPHB5Q86YW7 130 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 TMEM61Q8N0U2 210 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 FAM89BQ8N5H3 189 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 GATAD1Q8WUU5 269 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 SRSF12Q8WXF0 261 aaKnown RBP6.11□□□□□ -1.43
USP39-216ENST00000490193 TMEM80Q96HE8 168 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 PHB2Q99623 299 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 HDHD3Q9BSH5 251 aaPredicted RBP6.11□□□□□ -1.43
USP39-216ENST00000490193 C9orf16Q9BUW7 83 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 LPAR5Q9H1C0 372 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 C12orf4Q9NQ89 552 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 PLEKHJ1Q9NW61 149 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 RDH8Q9NYR8 311 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 AK3Q9UIJ7 227 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 ABCA13Q86UQ4 5058 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 DNAH6Q9C0G6 4158 aa6.11□□□□□ -1.43
USP39-216ENST00000490193 TRAV25A0A0B4J276 109 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 TMEM213A2RRL7 107 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 SHOXO15266 292 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 DEDDO75618 318 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 DIRAS3O95661 229 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 BPNT1O95861 308 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 PRH1P02810 166 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 APELAP0DMC3 54 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 CELP19835 753 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 VAMP1P23763 118 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 MAP2K4P45985 399 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 SERPINB10P48595 397 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 CBX3Q13185 183 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms