RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 ACANP16112 2415 aa9.61□□□□□ -0.87
TRIM40-208ENST00000489892 PPIAL4CA0A0B4J2A2 164 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 TSPAN4O14817 238 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 MPPED1O15442 326 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 OR5AC1P0C628 307 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 OR8U9P0C7N5 309 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 PPIAL4GP0DN37 164 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 ATF4P18848 351 aaPredicted RBP9.6□□□□□ -0.87
TRIM40-208ENST00000489892 IL3RAP26951 378 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 GNRHRP30968 328 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 PPP1CCP36873 323 aaKnown RBP9.6□□□□□ -0.87
TRIM40-208ENST00000489892 GPR12P47775 334 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 CAV2P51636 162 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 ERVFRD-1P60508 538 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 DEFA5Q01523 94 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 GNMTQ14749 295 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 ZNF66Q6ZN08 573 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 C1orf122Q6ZSJ8 110 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 TCF23Q7RTU1 214 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.6□□□□□ -0.87
TRIM40-208ENST00000489892 LY6G5BQ8NDX9 201 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 OR8U1Q8NH10 309 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 C10orf105Q8TEF2 133 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 PERPQ96FX8 193 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 ADTRPQ96IZ2 230 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 HSD17B10Q99714 261 aaKnown RBP9.6□□□□□ -0.87
TRIM40-208ENST00000489892 AIFM2Q9BRQ8 373 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 OR2D2Q9H210 308 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 FBXL17Q9UF56 701 aa9.6□□□□□ -0.87
TRIM40-208ENST00000489892 A0A087X0M5 115 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 A0A1B0GX30 115 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 C17orf98A8MV24 154 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 H0Y980 276 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 DNASE2O00115 360 aaPredicted RBP9.59□□□□□ -0.87
TRIM40-208ENST00000489892 HSD17B6O14756 317 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 RAB29O14966 203 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 CTRB1P17538 263 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 NFYBP25208 207 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 KIR2DS2P43631 304 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 FLI1Q01543 452 aaPredicted RBP9.59□□□□□ -0.87
TRIM40-208ENST00000489892 ZNF266Q14584 549 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 DEFB113Q30KQ7 82 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 PHLDA2Q53GA4 152 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 CTRB2Q6GPI1 263 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 BTNL3Q6UXE8 466 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 ZNF818PQ6ZRF7 136 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 LDLRAD3Q86YD5 345 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 LFNGQ8NES3 379 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 LYPD6BQ8NI32 183 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 UBALD1Q8TB05 177 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 CD300LFQ8TDQ1 290 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 MSI2Q96DH6 328 aaKnown RBP9.59□□□□□ -0.87
TRIM40-208ENST00000489892 GINS3Q9BRX5 216 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 SLC25A31Q9H0C2 315 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 SMDT1Q9H4I9 107 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 CCL28Q9NRJ3 127 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 PSG11Q9UQ72 335 aa9.59□□□□□ -0.87
TRIM40-208ENST00000489892 LSM5Q9Y4Y9 91 aaKnown RBP9.59□□□□□ -0.87
TRIM40-208ENST00000489892 IGHV3-43A0A0B4J1X8 118 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 IGKV1D-13A0A0B4J2D9 117 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 C3orf85A0A1B0GTC6 90 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 VWC2LB2RUY7 222 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 F8W036 122 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 TRIM77I1YAP6 450 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 TOR1AO14656 332 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 FBXO24O75426 580 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 MED6O75586 246 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 PGLYRP1O75594 196 aaPredicted RBP9.58□□□□□ -0.88
TRIM40-208ENST00000489892 SERPINE2P07093 398 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 H2AFB1P0C5Y9 115 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 IGHV1-8P0DP01 117 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 IGHV3-43DP0DP04 118 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 IGKV1-13P0DP09 117 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 SLC25A6P12236 298 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 F2RP25116 425 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 PRRX1P54821 245 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 BAXQ07812 192 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 LTC4SQ16873 150 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 PXDC1Q5TGL8 231 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 PRAMEF5Q5TYX0 476 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 RPL7L1Q6DKI1 246 aaKnown RBP9.58□□□□□ -0.88
TRIM40-208ENST00000489892 DHRS7BQ6IAN0 325 aaPredicted RBP9.58□□□□□ -0.88
TRIM40-208ENST00000489892 FAM71F2Q6NXP2 309 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 PRSS57Q6UWY2 283 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 BTNL8Q6UX41 500 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 SLC25A48Q6ZT89 311 aaKnown RBP9.58□□□□□ -0.88
TRIM40-208ENST00000489892 TBC1D26Q86UD7 250 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 LINC00311Q8N616 119 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 OR4D5Q8NGN0 318 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 OR13D1Q8NGV5 346 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 OR9G1Q8NH87 305 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 CLDND2Q8NHS1 167 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 TMEM56Q96MV1 263 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 S1PR3Q99500 378 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 TMEM222Q9H0R3 208 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 TREM1Q9NP99 234 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 UQCC1Q9NVA1 299 aa9.58□□□□□ -0.88
TRIM40-208ENST00000489892 POLR3KQ9Y2Y1 108 aaPredicted RBP9.58□□□□□ -0.88
TRIM40-208ENST00000489892 AMMECR1Q9Y4X0 333 aaPredicted RBP9.58□□□□□ -0.88
TRIM40-208ENST00000489892 KPTNQ9Y664 436 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms