RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 RBM7Q9Y580 266 aaKnown RBP0.8□□□□□ -2.28
CCDC39-206ENST00000489868 V9GYY5 206 aaPredicted RBP0.8□□□□□ -2.28
CCDC39-206ENST00000489868 THSD7AQ9UPZ6 1657 aa0.79□□□□□ -2.28
CCDC39-206ENST00000489868 A0A087WUU8 490 aa0.79□□□□□ -2.28
CCDC39-206ENST00000489868 S100A9P06702 114 aaKnown RBP0.79□□□□□ -2.28
CCDC39-206ENST00000489868 TPM1P09493 284 aa0.79□□□□□ -2.28
CCDC39-206ENST00000489868 PVALBP20472 110 aaPredicted RBP0.79□□□□□ -2.28
CCDC39-206ENST00000489868 GRPRP30550 384 aa0.79□□□□□ -2.28
CCDC39-206ENST00000489868 RPL27AP46776 148 aaKnown RBP0.79□□□□□ -2.28
CCDC39-206ENST00000489868 ETV1P50549 477 aa0.79□□□□□ -2.28
CCDC39-206ENST00000489868 GNA12Q03113 381 aa0.79□□□□□ -2.28
CCDC39-206ENST00000489868 CDK5R1Q15078 307 aa0.79□□□□□ -2.28
CCDC39-206ENST00000489868 MOGQ16653 247 aa0.79□□□□□ -2.28
CCDC39-206ENST00000489868 C4orf26Q17RF5 130 aa0.79□□□□□ -2.28
CCDC39-206ENST00000489868 CCDC122Q5T0U0 273 aa0.79□□□□□ -2.28
CCDC39-206ENST00000489868 SPERTQ8NA61 448 aa0.79□□□□□ -2.28
CCDC39-206ENST00000489868 TLCD1Q96CP7 247 aa0.79□□□□□ -2.28
CCDC39-206ENST00000489868 NMNAT3Q96T66 252 aa0.79□□□□□ -2.28
CCDC39-206ENST00000489868 UBAP1Q9NZ09 502 aa0.79□□□□□ -2.28
CCDC39-206ENST00000489868 NOSIPQ9Y314 301 aaKnown RBP0.79□□□□□ -2.28
CCDC39-206ENST00000489868 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.79□□□□□ -2.28
CCDC39-206ENST00000489868 NAV1Q8NEY1 1877 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 METTL15A6NJ78 407 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 GOLGA8RI6L899 631 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 COPEO14579 308 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 CETN3O15182 167 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 YEATS4O95619 227 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 NPPAP01160 153 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 H2BFSP57053 126 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 SNAP25P60880 206 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 SMAGPQ0VAQ4 97 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 Q1T7F1 81 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 AADACL4Q5VUY2 407 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 FAM9CQ8IZT9 166 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 ZNF675Q8TD23 568 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 Q8WTZ3 238 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 PPCDCQ96CD2 204 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 EMC3Q9P0I2 261 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 TECTAO75443 2155 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 MAP3K19Q56UN5 1328 aa0.78□□□□□ -2.28
CCDC39-206ENST00000489868 EIF4G1Q04637 1599 aaKnown RBP0.78□□□□□ -2.29
CCDC39-206ENST00000489868 POLEQ07864 2286 aa0.77□□□□□ -2.29
CCDC39-206ENST00000489868 TRAV8-1A0A0A6YYK1 113 aa0.77□□□□□ -2.29
CCDC39-206ENST00000489868 F8VZ95 297 aa0.77□□□□□ -2.29
CCDC39-206ENST00000489868 S100A6P06703 90 aa0.77□□□□□ -2.29
CCDC39-206ENST00000489868 BLVRAP53004 296 aa0.77□□□□□ -2.29
CCDC39-206ENST00000489868 HADHBP55084 474 aaKnown RBP0.77□□□□□ -2.29
CCDC39-206ENST00000489868 SARNPP82979 210 aaKnown RBP0.77□□□□□ -2.29
CCDC39-206ENST00000489868 HPCAP84074 193 aa0.77□□□□□ -2.29
CCDC39-206ENST00000489868 SURF2Q15527 256 aaPredicted RBP0.77□□□□□ -2.29
CCDC39-206ENST00000489868 USF2Q15853 346 aaPredicted RBP0.77□□□□□ -2.29
CCDC39-206ENST00000489868 LYZL1Q6UWQ5 148 aa0.77□□□□□ -2.29
CCDC39-206ENST00000489868 C7orf65Q6ZTY9 151 aa0.77□□□□□ -2.29
CCDC39-206ENST00000489868 SLC36A1Q7Z2H8 476 aa0.77□□□□□ -2.29
CCDC39-206ENST00000489868 SPATA24Q86W54 205 aa0.77□□□□□ -2.29
CCDC39-206ENST00000489868 KRT222Q8N1A0 295 aa0.77□□□□□ -2.29
CCDC39-206ENST00000489868 Q8N2B8 174 aa0.77□□□□□ -2.29
CCDC39-206ENST00000489868 RIBC1Q8N443 379 aaPredicted RBP0.77□□□□□ -2.29
CCDC39-206ENST00000489868 STOML3Q8TAV4 291 aa0.77□□□□□ -2.29
CCDC39-206ENST00000489868 C8orf76Q96K31 380 aa0.77□□□□□ -2.29
CCDC39-206ENST00000489868 ATP6V1G3Q96LB4 118 aa0.77□□□□□ -2.29
CCDC39-206ENST00000489868 DOHHQ9BU89 302 aa0.77□□□□□ -2.29
CCDC39-206ENST00000489868 ADAT1Q9BUB4 502 aaKnown RBP0.77□□□□□ -2.29
CCDC39-206ENST00000489868 TMEM222Q9H0R3 208 aa0.77□□□□□ -2.29
CCDC39-206ENST00000489868 PARVAQ9NVD7 372 aa0.77□□□□□ -2.29
CCDC39-206ENST00000489868 ZCCHC6Q5VYS8 1495 aaKnown RBP0.77□□□□□ -2.29
CCDC39-206ENST00000489868 BRWD1Q9NSI6 2320 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 ABCC12Q96J65 1359 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 IGHV1-18A0A0C4DH31 117 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 ERICH2A1L162 156 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 OR6C6A6NF89 314 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 ZNF879B4DU55 563 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 HSBP1L1C9JCN9 74 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 YKT6O15498 198 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 KLRC4O43908 158 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 CXCL2P19875 107 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 CFL1P23528 166 aaKnown RBP0.76□□□□□ -2.29
CCDC39-206ENST00000489868 S100A5P33763 92 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 TMEM33P57088 247 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 LRRC26Q2I0M4 334 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 CD302Q8IX05 232 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 SYCE1Q8N0S2 351 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 C9orf163Q8N9P6 203 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 OR52E4Q8NGH9 312 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 DDI1Q8WTU0 396 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 LRRC45Q96CN5 670 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 C19orf60Q96EN9 201 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 ARL5BQ96KC2 179 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 IMMP2LQ96T52 175 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 MROQ9BYG7 248 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 NSRP1Q9H0G5 558 aaKnown RBP0.76□□□□□ -2.29
CCDC39-206ENST00000489868 CST9LQ9H4G1 147 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 PARVGQ9HBI0 331 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 IL20Q9NYY1 176 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 CHMP5Q9NZZ3 219 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 C15orf41Q9Y2V0 281 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 HDGFL3Q9Y3E1 203 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 GMEB1Q9Y692 573 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 MICAL3Q7RTP6 2002 aa0.76□□□□□ -2.29
CCDC39-206ENST00000489868 MYO3BQ8WXR4 1341 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms