RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TXNL4BQ9NX01 149 aaKnown RBP1.44□□□□□ -2.18
RFC4-213ENST00000489028 KIF15Q9NS87 1388 aa1.44□□□□□ -2.18
RFC4-213ENST00000489028 CHD2O14647 1828 aaKnown RBP1.43□□□□□ -2.18
RFC4-213ENST00000489028 PLCH2O75038 1416 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 TMED7-TICAM2A0A0A6YYA0 188 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 A0A1W2PNM2 257 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 TMEM210A6NLX4 147 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 EVPLLA8MZ36 301 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 NDUFB2O95178 105 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 CTSGP08311 255 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 RPS17P08708 135 aaKnown RBP1.43□□□□□ -2.18
RFC4-213ENST00000489028 OR5G3P0C626 314 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 CRYBB3P26998 211 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 CD200P41217 278 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 REG1BP48304 166 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 CDK9P50750 372 aaKnown RBP1.43□□□□□ -2.18
RFC4-213ENST00000489028 RWDD2BP57060 319 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 GNA12Q03113 381 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 FABP9Q0Z7S8 132 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 PRDX4Q13162 271 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 AKIRIN2Q53H80 203 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 TMEM31Q5JXX7 168 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 SYPL2Q5VXT5 272 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 ZNF322Q6U7Q0 402 aaPredicted RBP1.43□□□□□ -2.18
RFC4-213ENST00000489028 OR10D4PQ8NGN7 298 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 OR2T27Q8NH04 317 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 CHMP6Q96FZ7 201 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 CCL13Q99616 98 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 TMEM222Q9H0R3 208 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 VPS29Q9UBQ0 182 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 HSPE1-MOB4S4R3N1 261 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 ZSWIM8A7E2V4 1837 aa1.43□□□□□ -2.18
RFC4-213ENST00000489028 IGLV10-54A0A075B6I4 117 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 IGHV1-69-2A0A0G2JMI3 117 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 TMEM235A6NFC5 223 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 OR4C45A6NMZ5 311 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 C17orf98A8MV24 154 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 OR11H12B2RN74 326 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 TMEM114B3SHH9 223 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 E7EQL1 145 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 H3BPC8 53 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 LYPLA2O95372 231 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 CD79AP11912 226 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 CPMP14384 443 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 ALOX5APP20292 161 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 MAP2K4P45985 399 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 IDH3GP51553 393 aaPredicted RBP1.42□□□□□ -2.18
RFC4-213ENST00000489028 AP3S2P59780 193 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 SPCS3P61009 180 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 TBPL1P62380 186 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 FKBP1AP62942 108 aaKnown RBP1.42□□□□□ -2.18
RFC4-213ENST00000489028 PSG4Q00888 419 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 CAV1Q03135 178 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 AESQ08117 197 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 SAPCD1Q5SSQ6 148 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 SFXN4Q6P4A7 337 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 GLT6D1Q7Z4J2 308 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 MSRB3Q8IXL7 192 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 DEFB125Q8N687 156 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 DAND5Q8N907 189 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 OR11H2Q8NH07 326 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 RAB2BQ8WUD1 216 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 GNPNAT1Q96EK6 184 aaPredicted RBP1.42□□□□□ -2.18
RFC4-213ENST00000489028 OR52E6Q96RD3 313 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 AICDAQ9GZX7 198 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 GPR84Q9NQS5 396 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 AK3Q9UIJ7 227 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 ANAPC10Q9UM13 185 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 SLC22A13Q9Y226 551 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 KLK5Q9Y337 293 aaPredicted RBP1.42□□□□□ -2.18
RFC4-213ENST00000489028 PXMP4Q9Y6I8 212 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 CACNA1DQ01668 2161 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 SNAPC4Q5SXM2 1469 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 THSD7AQ9UPZ6 1657 aa1.42□□□□□ -2.18
RFC4-213ENST00000489028 A0A1W2PQL4 384 aaPredicted RBP1.41□□□□□ -2.18
RFC4-213ENST00000489028 C19orf71A6NCJ1 209 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 EEF1E1-BLOC1S5C9J1V9 151 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 C9JCJ5 164 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 COX7A2LO14548 114 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 ATP5HO75947 161 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 SOD1P00441 154 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 IGHV1-69P01742 117 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 GZMBP10144 247 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 CCL3P10147 92 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 RPL27AP46776 148 aaKnown RBP1.41□□□□□ -2.18
RFC4-213ENST00000489028 GABRA2P47869 451 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 SERPINB10P48595 397 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 ZNF140P52738 457 aaPredicted RBP1.41□□□□□ -2.18
RFC4-213ENST00000489028 TAS2R30P59541 319 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 POLR2GP62487 172 aaKnown RBP eCLIP1.41□□□□□ -2.18
RFC4-213ENST00000489028 REEP5Q00765 189 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 PMAIP1Q13794 54 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 SPA17Q15506 151 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 FAM229BQ4G0N7 80 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 FAM201AQ5SY85 155 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 HCP5Q6MZN7 132 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 C1orf158Q8N1D5 194 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 SLC22A24Q8N4F4 322 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 OR51D1Q8NGF3 324 aa1.41□□□□□ -2.18
RFC4-213ENST00000489028 OR13C8Q8NGS7 320 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms