RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 STPG2Q8N412 459 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 TMEM229BQ8NBD8 167 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 CHPT1Q8WUD6 406 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 FCAMRQ8WWV6 532 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 NOL4LQ96MY1 436 aaPredicted RBP14.69□□□□□ -0.06
PTCD3-217ENST00000488801 TSNAXQ99598 290 aaKnown RBP14.69□□□□□ -0.06
PTCD3-217ENST00000488801 FBXL15Q9H469 300 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 KIAA1456Q9P272 454 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 NBEAL1Q6ZS30 2694 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 SRRM4A7MD48 611 aaKnown RBP14.68□□□□□ -0.06
PTCD3-217ENST00000488801 CD3DP04234 171 aa14.68□□□□□ -0.06
PTCD3-217ENST00000488801 CD28P10747 220 aa14.68□□□□□ -0.06
PTCD3-217ENST00000488801 LGALS7P47929 136 aa14.68□□□□□ -0.06
PTCD3-217ENST00000488801 HERV-K104P61576 105 aa14.68□□□□□ -0.06
PTCD3-217ENST00000488801 SSBP2P81877 361 aaPredicted RBP14.68□□□□□ -0.06
PTCD3-217ENST00000488801 CD83Q01151 205 aa14.68□□□□□ -0.06
PTCD3-217ENST00000488801 ZNF79Q15937 498 aa14.68□□□□□ -0.06
PTCD3-217ENST00000488801 MRGPRG-AS1Q2M3A8 158 aa14.68□□□□□ -0.06
PTCD3-217ENST00000488801 C19orf54Q5BKX5 351 aa14.68□□□□□ -0.06
PTCD3-217ENST00000488801 PRR31Q5SQ13 230 aa14.68□□□□□ -0.06
PTCD3-217ENST00000488801 AADACL3Q5VUY0 350 aa14.68□□□□□ -0.06
PTCD3-217ENST00000488801 TMEM17Q86X19 198 aa14.68□□□□□ -0.06
PTCD3-217ENST00000488801 FOXRED2Q8IWF2 684 aa14.68□□□□□ -0.06
PTCD3-217ENST00000488801 MFSD4AQ8N468 514 aa14.68□□□□□ -0.06
PTCD3-217ENST00000488801 SGMS2Q8NHU3 365 aa14.68□□□□□ -0.06
PTCD3-217ENST00000488801 OSR1Q8TAX0 266 aaPredicted RBP14.68□□□□□ -0.06
PTCD3-217ENST00000488801 HARBI1Q96MB7 349 aa14.68□□□□□ -0.06
PTCD3-217ENST00000488801 TINAGL1Q9GZM7 467 aaPredicted RBP14.68□□□□□ -0.06
PTCD3-217ENST00000488801 TPSG1Q9NRR2 321 aa14.68□□□□□ -0.06
PTCD3-217ENST00000488801 M0QYG6 137 aa14.67□□□□□ -0.06
PTCD3-217ENST00000488801 ETV6P41212 452 aa14.67□□□□□ -0.06
PTCD3-217ENST00000488801 RPS16P62249 146 aaKnown RBP14.67□□□□□ -0.06
PTCD3-217ENST00000488801 ARRDC1Q8N5I2 433 aa14.67□□□□□ -0.06
PTCD3-217ENST00000488801 OR5AU1Q8NGC0 362 aa14.67□□□□□ -0.06
PTCD3-217ENST00000488801 OR6F1Q8NGZ6 308 aa14.67□□□□□ -0.06
PTCD3-217ENST00000488801 GPHA2Q96T91 129 aa14.67□□□□□ -0.06
PTCD3-217ENST00000488801 OR51J1Q9H342 316 aa14.67□□□□□ -0.06
PTCD3-217ENST00000488801 TAS2R8Q9NYW2 309 aa14.67□□□□□ -0.06
PTCD3-217ENST00000488801 PSMB11A5LHX3 300 aa14.66□□□□□ -0.06
PTCD3-217ENST00000488801 RBFOX2O43251 390 aaKnown RBP eCLIP14.66□□□□□ -0.06
PTCD3-217ENST00000488801 SLC25A17O43808 307 aa14.66□□□□□ -0.06
PTCD3-217ENST00000488801 PEX14O75381 377 aa14.66□□□□□ -0.06
PTCD3-217ENST00000488801 CRYZL1O95825 349 aa14.66□□□□□ -0.06
PTCD3-217ENST00000488801 UCP3P55916 312 aa14.66□□□□□ -0.06
PTCD3-217ENST00000488801 TAS2R19P59542 299 aa14.66□□□□□ -0.06
PTCD3-217ENST00000488801 RNASE10Q5GAN6 216 aaKnown RBP14.66□□□□□ -0.06
PTCD3-217ENST00000488801 HIST2H2BDQ6DRA6 164 aa14.66□□□□□ -0.06
PTCD3-217ENST00000488801 LIN54Q6MZP7 749 aa14.66□□□□□ -0.06
PTCD3-217ENST00000488801 OR4D10Q8NGI6 311 aa14.66□□□□□ -0.06
PTCD3-217ENST00000488801 BORCS5Q969J3 196 aa14.66□□□□□ -0.06
PTCD3-217ENST00000488801 TRIM63Q969Q1 353 aa14.66□□□□□ -0.06
PTCD3-217ENST00000488801 METTL1Q9UBP6 276 aaKnown RBP14.66□□□□□ -0.06
PTCD3-217ENST00000488801 LINC00527Q9UJ94 153 aa14.66□□□□□ -0.06
PTCD3-217ENST00000488801 PRELID3BQ9Y3B1 194 aa14.66□□□□□ -0.06
PTCD3-217ENST00000488801 FBXO7Q9Y3I1 522 aa14.66□□□□□ -0.06
PTCD3-217ENST00000488801 FBN3Q75N90 2809 aa14.65□□□□□ -0.06
PTCD3-217ENST00000488801 FABP12A6NFH5 140 aa14.65□□□□□ -0.06
PTCD3-217ENST00000488801 FCN1O00602 326 aa14.65□□□□□ -0.06
PTCD3-217ENST00000488801 SHOXO15266 292 aa14.65□□□□□ -0.06
PTCD3-217ENST00000488801 ATP6V0E1O15342 81 aa14.65□□□□□ -0.06
PTCD3-217ENST00000488801 FCGR3BO75015 233 aa14.65□□□□□ -0.06
PTCD3-217ENST00000488801 ZNF735P0CB33 412 aa14.65□□□□□ -0.06
PTCD3-217ENST00000488801 PTBP1P26599 531 aaKnown RBP eCLIP14.65□□□□□ -0.06
PTCD3-217ENST00000488801 KIR2DS2P43631 304 aa14.65□□□□□ -0.06
PTCD3-217ENST00000488801 CX3CL1P78423 397 aa14.65□□□□□ -0.06
PTCD3-217ENST00000488801 CBX3Q13185 183 aa14.65□□□□□ -0.06
PTCD3-217ENST00000488801 RNF152Q8N8N0 203 aa14.65□□□□□ -0.06
PTCD3-217ENST00000488801 C11orf44Q8N8P7 122 aa14.65□□□□□ -0.06
PTCD3-217ENST00000488801 OR6Q1Q8NGQ2 317 aa14.65□□□□□ -0.06
PTCD3-217ENST00000488801 OR4S2Q8NH73 311 aa14.65□□□□□ -0.06
PTCD3-217ENST00000488801 TCTEX1D2Q8WW35 142 aa14.65□□□□□ -0.06
PTCD3-217ENST00000488801 CITED2Q99967 270 aaPredicted RBP14.65□□□□□ -0.06
PTCD3-217ENST00000488801 RSRP1Q9BUV0 290 aa14.65□□□□□ -0.06
PTCD3-217ENST00000488801 ANKRD20A5PA0PJZ0 165 aa14.64□□□□□ -0.07
PTCD3-217ENST00000488801 A6NHS1 94 aa14.64□□□□□ -0.07
PTCD3-217ENST00000488801 TNFSF12O43508 249 aa14.64□□□□□ -0.07
PTCD3-217ENST00000488801 CSF1P09603 554 aa14.64□□□□□ -0.07
PTCD3-217ENST00000488801 EGR2P11161 476 aaPredicted RBP14.64□□□□□ -0.07
PTCD3-217ENST00000488801 PPIFP30405 207 aaKnown RBP14.64□□□□□ -0.07
PTCD3-217ENST00000488801 S100A5P33763 92 aa14.64□□□□□ -0.07
PTCD3-217ENST00000488801 UBE2KP61086 200 aa14.64□□□□□ -0.07
PTCD3-217ENST00000488801 STEAP1BQ6NZ63 245 aa14.64□□□□□ -0.07
PTCD3-217ENST00000488801 CENPVQ7Z7K6 275 aaPredicted RBP14.64□□□□□ -0.07
PTCD3-217ENST00000488801 PPP1R27Q86WC6 154 aa14.64□□□□□ -0.07
PTCD3-217ENST00000488801 NDUFA11Q86Y39 141 aa14.64□□□□□ -0.07
PTCD3-217ENST00000488801 MRGPRFQ96AM1 343 aa14.64□□□□□ -0.07
PTCD3-217ENST00000488801 GPR31O00270 319 aa14.63□□□□□ -0.07
PTCD3-217ENST00000488801 RAMP3O60896 148 aa14.63□□□□□ -0.07
PTCD3-217ENST00000488801 CA2P00918 260 aa14.63□□□□□ -0.07
PTCD3-217ENST00000488801 SAA1P0DJI8 122 aaPredicted RBP14.63□□□□□ -0.07
PTCD3-217ENST00000488801 TSPAN5P62079 268 aa14.63□□□□□ -0.07
PTCD3-217ENST00000488801 CATR1Q13166 79 aa14.63□□□□□ -0.07
PTCD3-217ENST00000488801 C2orf68Q2NKX9 166 aa14.63□□□□□ -0.07
PTCD3-217ENST00000488801 OR2B11Q5JQS5 317 aa14.63□□□□□ -0.07
PTCD3-217ENST00000488801 ZNF562Q6V9R5 426 aa14.63□□□□□ -0.07
PTCD3-217ENST00000488801 ZNF329Q86UD4 541 aa14.63□□□□□ -0.07
PTCD3-217ENST00000488801 COMMD1Q8N668 190 aa14.63□□□□□ -0.07
PTCD3-217ENST00000488801 TEX45Q8NA69 505 aa14.63□□□□□ -0.07
PTCD3-217ENST00000488801 OR4X2Q8NGF9 303 aa14.63□□□□□ -0.07
PTCD3-217ENST00000488801 M0QZ24 198 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms