RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 CATR1Q13166 79 aa13.69□□□□□ -0.22
GCOM1-210ENST00000488175 EIF4EBP1Q13541 118 aaPredicted RBP13.69□□□□□ -0.22
GCOM1-210ENST00000488175 TBC1D28Q2M2D7 210 aa13.69□□□□□ -0.22
GCOM1-210ENST00000488175 NINJ1Q92982 152 aa13.69□□□□□ -0.22
GCOM1-210ENST00000488175 SDSLQ96GA7 329 aa13.69□□□□□ -0.22
GCOM1-210ENST00000488175 DEFB127Q9H1M4 99 aa13.69□□□□□ -0.22
GCOM1-210ENST00000488175 TRAPPC1Q9Y5R8 145 aa13.69□□□□□ -0.22
GCOM1-210ENST00000488175 SMPD2O60906 423 aa13.68□□□□□ -0.22
GCOM1-210ENST00000488175 TYMSP04818 313 aa13.68□□□□□ -0.22
GCOM1-210ENST00000488175 HNF1AP20823 631 aa13.68□□□□□ -0.22
GCOM1-210ENST00000488175 LTC4SQ16873 150 aa13.68□□□□□ -0.22
GCOM1-210ENST00000488175 FBXW9Q5XUX1 488 aa13.68□□□□□ -0.22
GCOM1-210ENST00000488175 TEX38Q6PEX7 206 aa13.68□□□□□ -0.22
GCOM1-210ENST00000488175 Q8N7P7 452 aa13.68□□□□□ -0.22
GCOM1-210ENST00000488175 SLC25A40Q8TBP6 338 aa13.68□□□□□ -0.22
GCOM1-210ENST00000488175 QTRT1Q9BXR0 403 aaKnown RBP13.68□□□□□ -0.22
GCOM1-210ENST00000488175 CLDN14O95500 239 aa13.68□□□□□ -0.22
GCOM1-210ENST00000488175 COL8A2P25067 703 aa13.68□□□□□ -0.22
GCOM1-210ENST00000488175 TCF23Q7RTU1 214 aa13.68□□□□□ -0.22
GCOM1-210ENST00000488175 GBGT1Q8N5D6 347 aa13.68□□□□□ -0.22
GCOM1-210ENST00000488175 MRPL37Q9BZE1 423 aaKnown RBP13.68□□□□□ -0.22
GCOM1-210ENST00000488175 OBP2BQ9NPH6 170 aa13.68□□□□□ -0.22
GCOM1-210ENST00000488175 TP53TG5Q9Y2B4 290 aa13.68□□□□□ -0.22
GCOM1-210ENST00000488175 C17orf112F2Z3M2 114 aa13.67□□□□□ -0.22
GCOM1-210ENST00000488175 MLNRO43193 412 aa13.67□□□□□ -0.22
GCOM1-210ENST00000488175 CD82P27701 267 aa13.67□□□□□ -0.22
GCOM1-210ENST00000488175 PSG7Q13046 419 aa13.67□□□□□ -0.22
GCOM1-210ENST00000488175 FIP1L1Q6UN15 594 aaKnown RBP13.67□□□□□ -0.22
GCOM1-210ENST00000488175 ZBTB34Q8NCN2 500 aa13.67□□□□□ -0.22
GCOM1-210ENST00000488175 TRIOBPQ9H2D6 2365 aa13.67□□□□□ -0.22
GCOM1-210ENST00000488175 C15orf62A8K5M9 175 aa13.67□□□□□ -0.22
GCOM1-210ENST00000488175 CER1O95813 267 aa13.67□□□□□ -0.22
GCOM1-210ENST00000488175 CD33P20138 364 aa13.67□□□□□ -0.22
GCOM1-210ENST00000488175 GCH1P30793 250 aa13.67□□□□□ -0.22
GCOM1-210ENST00000488175 RPL15P61313 204 aaKnown RBP13.67□□□□□ -0.22
GCOM1-210ENST00000488175 VWC2Q2TAL6 325 aa13.67□□□□□ -0.22
GCOM1-210ENST00000488175 LBHQ53QV2 105 aaPredicted RBP13.67□□□□□ -0.22
GCOM1-210ENST00000488175 ZNF766Q5HY98 468 aa13.67□□□□□ -0.22
GCOM1-210ENST00000488175 NANOS1Q8WY41 292 aaKnown RBP13.67□□□□□ -0.22
GCOM1-210ENST00000488175 COQ2Q96H96 371 aa13.67□□□□□ -0.22
GCOM1-210ENST00000488175 METRNQ9UJH8 293 aa13.67□□□□□ -0.22
GCOM1-210ENST00000488175 PSG11Q9UQ72 335 aa13.67□□□□□ -0.22
GCOM1-210ENST00000488175 MARCH11A6NNE9 402 aa13.66□□□□□ -0.22
GCOM1-210ENST00000488175 RAB29O14966 203 aa13.66□□□□□ -0.22
GCOM1-210ENST00000488175 TCAPO15273 167 aa13.66□□□□□ -0.22
GCOM1-210ENST00000488175 RBFOX2O43251 390 aaKnown RBP eCLIP13.66□□□□□ -0.22
GCOM1-210ENST00000488175 SOX15O60248 233 aa13.66□□□□□ -0.22
GCOM1-210ENST00000488175 CD1BP29016 333 aa13.66□□□□□ -0.22
GCOM1-210ENST00000488175 DBX2Q6ZNG2 339 aa13.66□□□□□ -0.22
GCOM1-210ENST00000488175 BEND2Q8NDZ0 799 aa13.66□□□□□ -0.22
GCOM1-210ENST00000488175 SGMS2Q8NHU3 365 aa13.66□□□□□ -0.22
GCOM1-210ENST00000488175 CIB3Q96Q77 187 aaPredicted RBP13.66□□□□□ -0.22
GCOM1-210ENST00000488175 DCTN5Q9BTE1 182 aa13.66□□□□□ -0.22
GCOM1-210ENST00000488175 CBLN4Q9NTU7 201 aa13.66□□□□□ -0.22
GCOM1-210ENST00000488175 FKBP11Q9NYL4 201 aa13.66□□□□□ -0.22
GCOM1-210ENST00000488175 FOXJ2Q9P0K8 574 aa13.66□□□□□ -0.22
GCOM1-210ENST00000488175 A0A1W2PPV4 95 aa13.66□□□□□ -0.22
GCOM1-210ENST00000488175 OOEPA6NGQ2 149 aa13.66□□□□□ -0.22
GCOM1-210ENST00000488175 MPV17P39210 176 aa13.66□□□□□ -0.22
GCOM1-210ENST00000488175 MEOX1P50221 254 aa13.66□□□□□ -0.22
GCOM1-210ENST00000488175 IQCJQ1A5X6 159 aa13.66□□□□□ -0.22
GCOM1-210ENST00000488175 TRBV20OR9-2A0A075B6H5 130 aa13.65□□□□□ -0.22
GCOM1-210ENST00000488175 OR9G9P0C7N8 305 aa13.65□□□□□ -0.22
GCOM1-210ENST00000488175 CCKARP32238 428 aa13.65□□□□□ -0.22
GCOM1-210ENST00000488175 LCN2P80188 198 aa13.65□□□□□ -0.22
GCOM1-210ENST00000488175 ZNF124Q15973 351 aa13.65□□□□□ -0.22
GCOM1-210ENST00000488175 GRIFINA4D1Z8 144 aa13.65□□□□□ -0.22
GCOM1-210ENST00000488175 C9orf172C9J069 976 aa13.65□□□□□ -0.22
GCOM1-210ENST00000488175 LYZL6O75951 148 aa13.65□□□□□ -0.22
GCOM1-210ENST00000488175 DCAF10Q5QP82 559 aa13.65□□□□□ -0.22
GCOM1-210ENST00000488175 VKORC1L1Q8N0U8 176 aa13.65□□□□□ -0.22
GCOM1-210ENST00000488175 OR13A1Q8NGR1 328 aa13.65□□□□□ -0.22
GCOM1-210ENST00000488175 FAM234AQ9H0X4 552 aa13.65□□□□□ -0.22
GCOM1-210ENST00000488175 PDE6DO43924 150 aa13.64□□□□□ -0.23
GCOM1-210ENST00000488175 FOSL1P15407 271 aa13.64□□□□□ -0.23
GCOM1-210ENST00000488175 PRAMEF6Q5VXH4 476 aa13.64□□□□□ -0.23
GCOM1-210ENST00000488175 TMEM144Q7Z5S9 345 aa13.64□□□□□ -0.23
GCOM1-210ENST00000488175 SNHG12Q9BXW3 62 aa13.64□□□□□ -0.23
GCOM1-210ENST00000488175 WDR83OSQ9Y284 106 aa13.64□□□□□ -0.23
GCOM1-210ENST00000488175 PXMP4Q9Y6I8 212 aa13.64□□□□□ -0.23
GCOM1-210ENST00000488175 IGHV3-13P01766 116 aa13.64□□□□□ -0.23
GCOM1-210ENST00000488175 IGHV3-7P01780 117 aa13.64□□□□□ -0.23
GCOM1-210ENST00000488175 NUTF2P61970 127 aaKnown RBP13.64□□□□□ -0.23
GCOM1-210ENST00000488175 LRP11Q86VZ4 500 aa13.64□□□□□ -0.23
GCOM1-210ENST00000488175 ABI3Q9P2A4 366 aa13.64□□□□□ -0.23
GCOM1-210ENST00000488175 FZR1Q9UM11 496 aa13.64□□□□□ -0.23
GCOM1-210ENST00000488175 THBS3P49746 956 aa13.63□□□□□ -0.23
GCOM1-210ENST00000488175 SPCS3P61009 180 aa13.63□□□□□ -0.23
GCOM1-210ENST00000488175 MRPL49Q13405 166 aaKnown RBP13.63□□□□□ -0.23
GCOM1-210ENST00000488175 SLC35E4Q6ICL7 350 aa13.63□□□□□ -0.23
GCOM1-210ENST00000488175 C11orf53Q8IXP5 236 aa13.63□□□□□ -0.23
GCOM1-210ENST00000488175 R3HDM4Q96D70 268 aa13.63□□□□□ -0.23
GCOM1-210ENST00000488175 SFRP2Q96HF1 295 aa13.63□□□□□ -0.23
GCOM1-210ENST00000488175 ARL14EPLP0DKL9 152 aa13.63□□□□□ -0.23
GCOM1-210ENST00000488175 FOXF2Q12947 444 aa13.63□□□□□ -0.23
GCOM1-210ENST00000488175 GCNT2Q8N0V5 402 aa13.63□□□□□ -0.23
GCOM1-210ENST00000488175 KLF14Q8TD94 323 aaPredicted RBP13.63□□□□□ -0.23
GCOM1-210ENST00000488175 MS4A10Q96PG2 267 aa13.63□□□□□ -0.23
GCOM1-210ENST00000488175 TAAR6Q96RI8 345 aa13.63□□□□□ -0.23
GCOM1-210ENST00000488175 IMMP2LQ96T52 175 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms