RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 CPNE2Q96FN4 548 aaPredicted RBP0.91□□□□□ -2.26
R3HDM1-219ENST00000488035 NMNAT3Q96T66 252 aa0.91□□□□□ -2.26
R3HDM1-219ENST00000488035 POLR3HQ9Y535 204 aaPredicted RBP0.91□□□□□ -2.26
R3HDM1-219ENST00000488035 DENND4BO75064 1496 aaPredicted RBP0.91□□□□□ -2.26
R3HDM1-219ENST00000488035 A0A087WUU8 490 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 TRGV5A0A0B4J1U4 118 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 TEX50A0A1B0GTY4 177 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 A8MUN3 132 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 ZNF705FA8MVS1 300 aaPredicted RBP0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 C2orf74A8MZ97 194 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 ITGB1BP1O14713 200 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 STX10O60499 249 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 MT-CO2P00403 227 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 HLA-DRAP01903 254 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 HLA-DQB2P05538 268 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 HIST1H1CP16403 213 aaKnown RBP0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 CD40LGP29965 261 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 CASQ1P31415 396 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 CD79BP40259 229 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 GABRA2P47869 451 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 CXCR4P61073 352 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 PPP1R1AQ13522 171 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 Q6ZTI0 123 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 LHFPL1Q86WI0 220 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 LRRC28Q86X40 367 aaPredicted RBP0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 TMEM251Q8N6I4 163 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 OR51T1Q8NGJ9 327 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 PACRGQ96M98 296 aaPredicted RBP0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 LLPHQ9BRT6 129 aaKnown RBP0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 PLEKHJ1Q9NW61 149 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 KLK5Q9Y337 293 aaPredicted RBP0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 RBM7Q9Y580 266 aaKnown RBP0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 MALRD1Q5VYJ5 2156 aa0.9□□□□□ -2.27
R3HDM1-219ENST00000488035 RP1L1Q8IWN7 2480 aaPredicted RBP0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 COL4A1P02462 1669 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 ABCC12Q96J65 1359 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 TRAV41A0A0B4J266 112 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 C5orf49A4QMS7 147 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 C9JCJ5 164 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 GOLGA8KD6RF30 607 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 GOLGA8MH3BSY2 632 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 BHLHE40O14503 412 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 NDUFB2O95178 105 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 OCMP0CE72 109 aaPredicted RBP0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 DEFA4P12838 97 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 CD24P25063 80 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 RAP1GDS1P52306 607 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 ERHP84090 104 aaKnown RBP0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 SLC38A11Q08AI6 406 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 MGAT3Q09327 533 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 UAP1Q16222 522 aaPredicted RBP0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 PLEKHG7Q6ZR37 379 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 SLC35E3Q7Z769 313 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 TMEM156Q8N614 296 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 RAB2BQ8WUD1 216 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 MS4A6EQ96DS6 147 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 KCTD7Q96MP8 289 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 BABAM2Q9NXR7 383 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 TAAR3PQ9P1P4 343 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 HHLA3Q9XRX5 114 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 COQ4Q9Y3A0 265 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 RTTNQ86VV8 2226 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 DICER1Q9UPY3 1922 aaKnown RBP0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 SIPA1L1O43166 1804 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 KDM5BQ9UGL1 1544 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 ZNF532Q9HCE3 1301 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 FREM1Q5H8C1 2179 aa0.89□□□□□ -2.27
R3HDM1-219ENST00000488035 REREQ9P2R6 1566 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 C1orf232A0A0U1RR37 186 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 TXNDC9O14530 226 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 PGLYRP1O75594 196 aaPredicted RBP0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 TYMSP04818 313 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 COX5BP10606 129 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 RPL27AP46776 148 aaKnown RBP0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 REG1BP48304 166 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 TBPL1P62380 186 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 BTN3A2P78410 334 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 GNA12Q03113 381 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 DMTNQ08495 405 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 HSP90B2PQ58FF3 399 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 C1orf194Q5T5A4 169 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 RASSF6Q6ZTQ3 369 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 OR1L8Q8NGR8 309 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 OR5J2Q8NH18 312 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 ZNF675Q8TD23 568 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 C12orf43Q96C57 262 aaKnown RBP0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 VCX3BQ9H321 246 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 HRASLSQ9HDD0 168 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 CUL9Q8IWT3 2517 aa0.88□□□□□ -2.27
R3HDM1-219ENST00000488035 BAZ2BQ9UIF8 2168 aaKnown RBP0.87□□□□□ -2.27
R3HDM1-219ENST00000488035 KIF15Q9NS87 1388 aa0.87□□□□□ -2.27
R3HDM1-219ENST00000488035 SIGLEC16A6NMB1 481 aa0.87□□□□□ -2.27
R3HDM1-219ENST00000488035 COX7A2LO14548 114 aa0.87□□□□□ -2.27
R3HDM1-219ENST00000488035 NPYP01303 97 aa0.87□□□□□ -2.27
R3HDM1-219ENST00000488035 CCL1P22362 96 aa0.87□□□□□ -2.27
R3HDM1-219ENST00000488035 IDH3GP51553 393 aaPredicted RBP0.87□□□□□ -2.27
R3HDM1-219ENST00000488035 BLVRAP53004 296 aa0.87□□□□□ -2.27
R3HDM1-219ENST00000488035 EMP2P54851 167 aa0.87□□□□□ -2.27
R3HDM1-219ENST00000488035 EBPQ15125 230 aaKnown RBP0.87□□□□□ -2.27
R3HDM1-219ENST00000488035 PABPC1L2AQ5JQF8 200 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms