RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 SLC36A2Q495M3 483 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 PABPC1L2AQ5JQF8 200 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 TEX30Q5JUR7 227 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 UTF1Q5T230 341 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 AVPI1Q5T686 147 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 NANOGP8Q6NSW7 305 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 LRRN1Q6UXK5 716 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 OAFQ86UD1 273 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 LHFPL3Q86UP9 236 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 LRP11Q86VZ4 500 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 DHFR2Q86XF0 187 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 WDFY1Q8IWB7 410 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 PGAM4Q8N0Y7 254 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 PUSL1Q8N0Z8 303 aaKnown RBP2.48□□□□□ -2.01
GPNMB-212ENST00000487890 SYS1Q8N2H4 156 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 SLC22A24Q8N4F4 322 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 CCDC71LQ8N9Z2 235 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 HSD17B11Q8NBQ5 300 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 OR4D11Q8NGI4 311 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 OR5B3Q8NH48 314 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 SYNPRQ8TBG9 265 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 SLC7A13Q8TCU3 470 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 C10orf82Q8WW14 230 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 TMEM239Q8WW34 195 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 RASSF5Q8WWW0 418 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 MAFIPQ8WZ33 124 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 C11orf40Q8WZ69 217 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 MARC2Q969Z3 335 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 FGGYQ96C11 551 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 LRRC58Q96CX6 371 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 RCN3Q96D15 328 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 SLC25A44Q96H78 314 aaPredicted RBP2.48□□□□□ -2.01
GPNMB-212ENST00000487890 TEAD3Q99594 435 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 ZNF184Q99676 751 aaPredicted RBP2.48□□□□□ -2.01
GPNMB-212ENST00000487890 DOK1Q99704 481 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 ARHGDIGQ99819 225 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 RARRES2Q99969 163 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 DCUN1D5Q9BTE7 237 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 ZNF426Q9BUY5 554 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 C19orf24Q9BVV8 132 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 RSPO3Q9BXY4 272 aaPredicted RBP2.48□□□□□ -2.01
GPNMB-212ENST00000487890 SELENOIQ9C0D9 397 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 Q9H3A6 140 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 RERGLQ9H628 205 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 METTL17Q9H7H0 456 aaPredicted RBP2.48□□□□□ -2.01
GPNMB-212ENST00000487890 NANOGQ9H9S0 305 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 PLGRKTQ9HBL7 147 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 RETNQ9HD89 108 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 IFT46Q9NQC8 304 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 TMEM38BQ9NVV0 291 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 PLEKHJ1Q9NW61 149 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 MED31Q9Y3C7 131 aa2.48□□□□□ -2.01
GPNMB-212ENST00000487890 VWFP04275 2813 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 IGHV7-81A0A0B4J1V7 117 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 A0A0G2JLM5 398 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 IGHV1-69-2A0A0G2JMI3 117 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 A0A1B0GV90 55 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 LOC102725191A0A1B0GVB3 256 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 GMNCA6NCL1 334 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 EFCAB9A8MZ26 197 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 CLDN25C9JDP6 229 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 FXYD1O00168 92 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 CCRL2O00421 344 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 XKRYO14609 159 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 MRPS12O15235 138 aaKnown RBP2.47□□□□□ -2.01
GPNMB-212ENST00000487890 TCF21O43680 179 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 FCN3O75636 299 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 FADS2O95864 444 aaKnown RBP2.47□□□□□ -2.01
GPNMB-212ENST00000487890 IGHV3-48P01763 117 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 SEMG1P04279 462 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 IFNW1P05000 195 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 ALDOBP05062 364 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 SERPINA5P05154 406 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 PGA4P0DJD7 388 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 PGA3P0DJD8 388 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 MGMTP16455 207 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 ZNF32P17041 273 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 COL8A2P25067 703 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 GLRXP35754 106 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 MDH2P40926 338 aaKnown RBP2.47□□□□□ -2.01
GPNMB-212ENST00000487890 KIR2DS4P43632 304 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 NUDT2P50583 147 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 FGF8P55075 233 aaPredicted RBP2.47□□□□□ -2.01
GPNMB-212ENST00000487890 TMEM33P57088 247 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 PCBD1P61457 104 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 PPP1CBP62140 327 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 RBX1P62877 108 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 FMODQ06828 376 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 EGFEM1PQ0D2K5 195 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 TPBGQ13641 420 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 VAX1Q5SQQ9 334 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 OLFML2AQ68BL7 652 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 ARL9Q6T311 187 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 IDO2Q6ZQW0 420 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 ARPINQ7Z6K5 226 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 CLDN22Q8N7P3 220 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 POM121L12Q8N7R1 296 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 C8orf31Q8N9H6 132 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 NECAP1Q8NC96 275 aa2.47□□□□□ -2.01
GPNMB-212ENST00000487890 OR8J3Q8NGG0 315 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms