RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 IGKV3-15P01624 115 aa14.08□□□□□ -0.16
COL7A1-210ENST00000487017 LOXL3P58215 753 aa14.08□□□□□ -0.16
COL7A1-210ENST00000487017 HSPE1P61604 102 aaKnown RBP14.08□□□□□ -0.16
COL7A1-210ENST00000487017 LINC00114Q6XXX2 140 aa14.08□□□□□ -0.16
COL7A1-210ENST00000487017 TMEM189A5PLL7 270 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 TRGC1P0CF51 173 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 ERVFRD-1P60508 538 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 QTRT1Q9BXR0 403 aaKnown RBP14.07□□□□□ -0.16
COL7A1-210ENST00000487017 CHRNA10Q9GZZ6 450 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 PARLQ9H300 379 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 TRBV23-1A0A0A0MS06 115 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 A8MXK9 166 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 AHRRA9YTQ3 701 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 ZNF658BQ4V348 819 aaPredicted RBP14.07□□□□□ -0.16
COL7A1-210ENST00000487017 PSMG3Q9BT73 122 aaPredicted RBP14.07□□□□□ -0.16
COL7A1-210ENST00000487017 AICDAQ9GZX7 198 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 IDI2-AS1Q9NZ38 188 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 JPT1Q9UK76 154 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 C2orf68Q2NKX9 166 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 TM2D1Q9BX74 207 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 GFRA1P56159 465 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 EFNB1P98172 346 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 PMCHL1Q16048 86 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 ZNF506Q5JVG8 444 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 CALHM1Q8IU99 346 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 CGB1A6NKQ9 187 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 ZNF324O75467 553 aaPredicted RBP14.07□□□□□ -0.16
COL7A1-210ENST00000487017 KBTBD11O94819 623 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 IZUMO4Q1ZYL8 232 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 SPSB2Q99619 263 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 DMRT1Q9Y5R6 373 aa14.07□□□□□ -0.16
COL7A1-210ENST00000487017 ANKRD36A6QL64 1941 aa14.06□□□□□ -0.16
COL7A1-210ENST00000487017 MSGN1A6NI15 193 aa14.06□□□□□ -0.16
COL7A1-210ENST00000487017 COMPP49747 757 aaPredicted RBP14.06□□□□□ -0.16
COL7A1-210ENST00000487017 METTL1Q9UBP6 276 aaKnown RBP14.06□□□□□ -0.16
COL7A1-210ENST00000487017 HILPDAQ9Y5L2 63 aa14.06□□□□□ -0.16
COL7A1-210ENST00000487017 PGPA6NDG6 321 aa14.06□□□□□ -0.16
COL7A1-210ENST00000487017 K7ERU9 68 aa14.06□□□□□ -0.16
COL7A1-210ENST00000487017 KLF14Q8TD94 323 aaPredicted RBP14.06□□□□□ -0.16
COL7A1-210ENST00000487017 SPSB4Q96A44 273 aa14.06□□□□□ -0.16
COL7A1-210ENST00000487017 IGHV3-72A0A0B4J1Y9 119 aa14.06□□□□□ -0.16
COL7A1-210ENST00000487017 STAG3L2P0CL84 134 aa14.06□□□□□ -0.16
COL7A1-210ENST00000487017 ID1P41134 155 aa14.06□□□□□ -0.16
COL7A1-210ENST00000487017 C1QL2Q7Z5L3 287 aa14.06□□□□□ -0.16
COL7A1-210ENST00000487017 MIEN1Q9BRT3 115 aa14.06□□□□□ -0.16
COL7A1-210ENST00000487017 A0A1W2PQM1 296 aa14.06□□□□□ -0.16
COL7A1-210ENST00000487017 PLAUP00749 431 aa14.06□□□□□ -0.16
COL7A1-210ENST00000487017 PTGDSP41222 190 aa14.06□□□□□ -0.16
COL7A1-210ENST00000487017 MMD2Q8IY49 270 aa14.06□□□□□ -0.16
COL7A1-210ENST00000487017 DNASE2BQ8WZ79 361 aa14.06□□□□□ -0.16
COL7A1-210ENST00000487017 NEUROG3Q9Y4Z2 214 aa14.06□□□□□ -0.16
COL7A1-210ENST00000487017 PQLC2LA1A4F0 135 aa14.05□□□□□ -0.16
COL7A1-210ENST00000487017 CCL21O00585 134 aa14.05□□□□□ -0.16
COL7A1-210ENST00000487017 DRAM1Q8N682 238 aa14.05□□□□□ -0.16
COL7A1-210ENST00000487017 IGHV3OR16-12A0A075B7B8 117 aa14.05□□□□□ -0.16
COL7A1-210ENST00000487017 RNASE1P07998 156 aaKnown RBP14.05□□□□□ -0.16
COL7A1-210ENST00000487017 ADRA2AP08913 450 aa14.05□□□□□ -0.16
COL7A1-210ENST00000487017 RELBQ01201 579 aa14.05□□□□□ -0.16
COL7A1-210ENST00000487017 HCP5Q6MZN7 132 aa14.05□□□□□ -0.16
COL7A1-210ENST00000487017 ZNF738Q8NE65 137 aa14.05□□□□□ -0.16
COL7A1-210ENST00000487017 OR5P3Q8WZ94 311 aa14.05□□□□□ -0.16
COL7A1-210ENST00000487017 ZDHHC8Q9ULC8 765 aa14.05□□□□□ -0.16
COL7A1-210ENST00000487017 PTPRZ1P23471 2315 aaPredicted RBP14.05□□□□□ -0.16
COL7A1-210ENST00000487017 C8orf88P0DMB2 117 aa14.05□□□□□ -0.16
COL7A1-210ENST00000487017 RTN4RQ9BZR6 473 aa14.05□□□□□ -0.16
COL7A1-210ENST00000487017 A0A1W2PR77 199 aa14.05□□□□□ -0.16
COL7A1-210ENST00000487017 CA2P00918 260 aa14.05□□□□□ -0.16
COL7A1-210ENST00000487017 BTF3P20290 206 aaKnown RBP14.05□□□□□ -0.16
COL7A1-210ENST00000487017 BTCP35070 178 aa14.05□□□□□ -0.16
COL7A1-210ENST00000487017 DNAJC13O75165 2243 aa14.05□□□□□ -0.16
COL7A1-210ENST00000487017 AKIRIN1Q9H9L7 192 aaPredicted RBP14.05□□□□□ -0.16
COL7A1-210ENST00000487017 DNAJC4Q9NNZ3 241 aa14.05□□□□□ -0.16
COL7A1-210ENST00000487017 IGKV1D-43A0A0B4J1Z2 117 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 SIAH2O43255 324 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 RND2P52198 227 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 NUBP1P53384 320 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 TAS2R60P59551 318 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 NR2C2APQ86WQ0 139 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 PILRBQ9UKJ0 227 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 UQCRFS1P47985 274 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 ADIPOQQ15848 244 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 HSPB7Q9UBY9 170 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 UQCR10Q9UDW1 63 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 EPOPA6NHQ4 379 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 FXYD3Q14802 87 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 RALYQ9UKM9 306 aaKnown RBP14.04□□□□□ -0.16
COL7A1-210ENST00000487017 TCF19Q9Y242 345 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 TGFBR3LH3BV60 316 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 SSTR5P35346 364 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 STARD6P59095 220 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 CDCP2Q5VXM1 449 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 OR4A5Q8NH83 315 aa14.04□□□□□ -0.16
COL7A1-210ENST00000487017 RTBDNQ9BSG5 229 aaPredicted RBP14.04□□□□□ -0.16
COL7A1-210ENST00000487017 C9orf172C9J069 976 aa14.03□□□□□ -0.16
COL7A1-210ENST00000487017 HINT1P49773 126 aaPredicted RBP14.03□□□□□ -0.16
COL7A1-210ENST00000487017 RAB37Q96AX2 223 aa14.03□□□□□ -0.16
COL7A1-210ENST00000487017 SFXN3Q9BWM7 321 aa14.03□□□□□ -0.16
COL7A1-210ENST00000487017 RNF222A6NCQ9 220 aa14.03□□□□□ -0.16
COL7A1-210ENST00000487017 GGACTQ9BVM4 153 aa14.03□□□□□ -0.16
COL7A1-210ENST00000487017 RAMP1O60894 148 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms