RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 CT45A7P0DMV0 189 aa17.7■□□□□ 0.42
TRADD-202ENST00000486556 ERVK-16P61578 105 aa17.7■□□□□ 0.42
TRADD-202ENST00000486556 GNB2P62879 340 aa17.7■□□□□ 0.42
TRADD-202ENST00000486556 EWSR1Q01844 656 aaKnown RBP eCLIP17.7■□□□□ 0.42
TRADD-202ENST00000486556 BAXQ07812 192 aa17.7■□□□□ 0.42
TRADD-202ENST00000486556 ABHD12Q8N2K0 398 aa17.7■□□□□ 0.42
TRADD-202ENST00000486556 ZNF383Q8NA42 475 aa17.7■□□□□ 0.42
TRADD-202ENST00000486556 CACFD1Q9UGQ2 172 aa17.7■□□□□ 0.42
TRADD-202ENST00000486556 NXPH3O95157 252 aa17.69■□□□□ 0.42
TRADD-202ENST00000486556 NHLH2Q02577 135 aa17.69■□□□□ 0.42
TRADD-202ENST00000486556 TNFRSF9Q07011 255 aa17.69■□□□□ 0.42
TRADD-202ENST00000486556 UBAC2Q8NBM4 344 aa17.69■□□□□ 0.42
TRADD-202ENST00000486556 OR10X1Q8NGY0 326 aa17.69■□□□□ 0.42
TRADD-202ENST00000486556 SMIM8Q96KF7 97 aa17.69■□□□□ 0.42
TRADD-202ENST00000486556 LIPFP07098 398 aa17.68■□□□□ 0.42
TRADD-202ENST00000486556 RNF224P0DH78 156 aa17.68■□□□□ 0.42
TRADD-202ENST00000486556 ZNF137PP52743 207 aa17.68■□□□□ 0.42
TRADD-202ENST00000486556 UBE2KP61086 200 aa17.68■□□□□ 0.42
TRADD-202ENST00000486556 RPL7L1Q6DKI1 246 aaKnown RBP17.68■□□□□ 0.42
TRADD-202ENST00000486556 DHRS7BQ6IAN0 325 aaPredicted RBP17.68■□□□□ 0.42
TRADD-202ENST00000486556 EIF5AL1Q6IS14 154 aaKnown RBP17.68■□□□□ 0.42
TRADD-202ENST00000486556 IGFBPL1Q8WX77 278 aa17.68■□□□□ 0.42
TRADD-202ENST00000486556 BORCS7-ASMTA0A0B4J1R7 106 aa17.68■□□□□ 0.42
TRADD-202ENST00000486556 NDUFS7O75251 213 aa17.68■□□□□ 0.42
TRADD-202ENST00000486556 RRASP10301 218 aa17.68■□□□□ 0.42
TRADD-202ENST00000486556 AARDQ4LEZ3 155 aa17.68■□□□□ 0.42
TRADD-202ENST00000486556 SSBP3Q9BWW4 388 aaPredicted RBP17.68■□□□□ 0.42
TRADD-202ENST00000486556 IGSF23A1L1A6 192 aa17.67■□□□□ 0.42
TRADD-202ENST00000486556 HRASP01112 189 aa17.67■□□□□ 0.42
TRADD-202ENST00000486556 NMBP08949 121 aa17.67■□□□□ 0.42
TRADD-202ENST00000486556 RTL8BQ17RB0 113 aa17.67■□□□□ 0.42
TRADD-202ENST00000486556 LRRC20Q8TCA0 184 aa17.67■□□□□ 0.42
TRADD-202ENST00000486556 AIFM2Q9BRQ8 373 aa17.67■□□□□ 0.42
TRADD-202ENST00000486556 DOCK11Q5JSL3 2073 aa17.66■□□□□ 0.42
TRADD-202ENST00000486556 HRNRQ86YZ3 2850 aaPredicted RBP17.66■□□□□ 0.42
TRADD-202ENST00000486556 CRYZL1O95825 349 aa17.66■□□□□ 0.42
TRADD-202ENST00000486556 IL3RAP26951 378 aa17.66■□□□□ 0.42
TRADD-202ENST00000486556 PRRX1P54821 245 aa17.66■□□□□ 0.42
TRADD-202ENST00000486556 POU2AF1Q16633 256 aa17.66■□□□□ 0.42
TRADD-202ENST00000486556 PDZD9Q8IXQ8 264 aa17.66■□□□□ 0.42
TRADD-202ENST00000486556 ST6GALNAC6Q969X2 333 aa17.66■□□□□ 0.42
TRADD-202ENST00000486556 SMIM3Q9BZL3 60 aa17.66■□□□□ 0.42
TRADD-202ENST00000486556 ZNRD1Q9P1U0 126 aa17.66■□□□□ 0.42
TRADD-202ENST00000486556 TXNL1O43396 289 aa17.65■□□□□ 0.42
TRADD-202ENST00000486556 CLEC9AQ6UXN8 241 aa17.65■□□□□ 0.42
TRADD-202ENST00000486556 BSCL2Q96G97 398 aaPredicted RBP17.65■□□□□ 0.42
TRADD-202ENST00000486556 CITED4Q96RK1 184 aa17.65■□□□□ 0.42
TRADD-202ENST00000486556 SLC35D1Q9NTN3 355 aa17.65■□□□□ 0.42
TRADD-202ENST00000486556 PSENENQ9NZ42 101 aa17.65■□□□□ 0.42
TRADD-202ENST00000486556 AUP1Q9Y679 476 aa17.65■□□□□ 0.42
TRADD-202ENST00000486556 LRBAP50851 2863 aa17.65■□□□□ 0.42
TRADD-202ENST00000486556 LOC105371242A0A075B767 164 aa17.65■□□□□ 0.42
TRADD-202ENST00000486556 LEUTXA8MZ59 168 aa17.65■□□□□ 0.42
TRADD-202ENST00000486556 RBMXL2O75526 392 aaKnown RBP17.65■□□□□ 0.42
TRADD-202ENST00000486556 LY86O95711 162 aa17.65■□□□□ 0.42
TRADD-202ENST00000486556 STX12Q86Y82 276 aa17.65■□□□□ 0.42
TRADD-202ENST00000486556 ZNF295-AS1Q8N0V1 137 aa17.65■□□□□ 0.42
TRADD-202ENST00000486556 CIB3Q96Q77 187 aaPredicted RBP17.65■□□□□ 0.42
TRADD-202ENST00000486556 ARV1Q9H2C2 271 aa17.65■□□□□ 0.42
TRADD-202ENST00000486556 RBKSQ9H477 322 aa17.65■□□□□ 0.42
TRADD-202ENST00000486556 MALRD1Q5VYJ5 2156 aa17.64■□□□□ 0.41
TRADD-202ENST00000486556 C22orf46C9J442 243 aa17.64■□□□□ 0.41
TRADD-202ENST00000486556 APOA2P02652 100 aa17.64■□□□□ 0.41
TRADD-202ENST00000486556 OR9G9P0C7N8 305 aa17.64■□□□□ 0.41
TRADD-202ENST00000486556 ZNF266Q14584 549 aa17.64■□□□□ 0.41
TRADD-202ENST00000486556 OR5AN1Q8NGI8 311 aa17.64■□□□□ 0.41
TRADD-202ENST00000486556 OR52E5Q8NH55 327 aa17.64■□□□□ 0.41
TRADD-202ENST00000486556 OR4A16Q8NH70 328 aa17.64■□□□□ 0.41
TRADD-202ENST00000486556 RHOVQ96L33 236 aa17.64■□□□□ 0.41
TRADD-202ENST00000486556 MED9Q9NWA0 146 aa17.64■□□□□ 0.41
TRADD-202ENST00000486556 IGHV2-26A0A0B4J1V2 119 aa17.63■□□□□ 0.41
TRADD-202ENST00000486556 SULT1A1P50225 295 aa17.63■□□□□ 0.41
TRADD-202ENST00000486556 BEND2Q8NDZ0 799 aa17.63■□□□□ 0.41
TRADD-202ENST00000486556 RNF141Q8WVD5 230 aa17.63■□□□□ 0.41
TRADD-202ENST00000486556 PCNPQ8WW12 178 aaKnown RBP17.63■□□□□ 0.41
TRADD-202ENST00000486556 PCGF1Q9BSM1 259 aa17.63■□□□□ 0.41
TRADD-202ENST00000486556 CLEC7AQ9BXN2 247 aa17.63■□□□□ 0.41
TRADD-202ENST00000486556 WFDC1Q9HC57 220 aa17.63■□□□□ 0.41
TRADD-202ENST00000486556 TMEM140Q9NV12 185 aa17.63■□□□□ 0.41
TRADD-202ENST00000486556 M0R1W7 72 aa17.63■□□□□ 0.41
TRADD-202ENST00000486556 IGLV1-47P01700 117 aa17.63■□□□□ 0.41
TRADD-202ENST00000486556 IAPPP10997 89 aa17.63■□□□□ 0.41
TRADD-202ENST00000486556 SSX9Q7RTT3 188 aa17.63■□□□□ 0.41
TRADD-202ENST00000486556 ZNF429Q86V71 674 aa17.63■□□□□ 0.41
TRADD-202ENST00000486556 MRPL20Q9BYC9 149 aaKnown RBP17.63■□□□□ 0.41
TRADD-202ENST00000486556 RELBQ01201 579 aa17.62■□□□□ 0.41
TRADD-202ENST00000486556 PDLIM3Q53GG5 364 aaPredicted RBP17.62■□□□□ 0.41
TRADD-202ENST00000486556 FAM74A1Q5RGS3 127 aa17.62■□□□□ 0.41
TRADD-202ENST00000486556 OR5C1Q8NGR4 320 aa17.62■□□□□ 0.41
TRADD-202ENST00000486556 OR13D1Q8NGV5 346 aa17.62■□□□□ 0.41
TRADD-202ENST00000486556 OSR1Q8TAX0 266 aaPredicted RBP17.62■□□□□ 0.41
TRADD-202ENST00000486556 TMED6Q8WW62 240 aa17.62■□□□□ 0.41
TRADD-202ENST00000486556 CCL19Q99731 98 aa17.62■□□□□ 0.41
TRADD-202ENST00000486556 NARFLQ9H6Q4 476 aa17.62■□□□□ 0.41
TRADD-202ENST00000486556 DOPEY1Q5JWR5 2465 aa17.61■□□□□ 0.41
TRADD-202ENST00000486556 H0YJW9 148 aa17.61■□□□□ 0.41
TRADD-202ENST00000486556 CST7O76096 145 aa17.61■□□□□ 0.41
TRADD-202ENST00000486556 SPCS3P61009 180 aa17.61■□□□□ 0.41
TRADD-202ENST00000486556 SRSF1Q07955 248 aaKnown RBP eCLIP17.61■□□□□ 0.41
TRADD-202ENST00000486556 HLA-DRB5Q30154 266 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms